Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2309 ATGCCTTATCGTCATTCTCAATCAGTCTGTTTCCAGGAAAGAACTGGAAATCATAATTTCAACTTTATAAACCTAATAACTCACCGCCTGATTCACCCCCTTCTCCATCGCTTGCTTTTCCCCTGTTTCTACCTCAGCTTCATTCTTGGATTCTGTTTCTATTTGGAGGCTTACATAACTATGGATCACCCAAATCTTAACGATTTCCCAGTTCGTGGAATTGATTATCAAACCCCTTTAACCCAATTTCACGATCAAACTTCTTTACCCACTTCATATCTATACCCAGAATTCGAAAACAGTTTTGTCTTCAACAACCCATCTCCAGATCTTGTTCCTTTCGTCGACCCCAACGGTTCTTCAGCGGCGGAGTTGAAATTAAGCGAAGGTGTGGCTTCTTCAGGGCGAAGCCCTGGTGGCGATTCTTCCTCAGATGAGAGTGATTTCAGGGAAAGTGTTCTCAAGTACATAAGCCAAATGCTTATGGAAGAGAATTTGGAAGAGAAGCCTTGTATGTTTTATGATCCCTTGGGCCTTGAAGTTACCGAGAAATCATTCTATGATGCTCTTGTTAAGAGTTACCCTCCTTCGCCTAACCAACCTCCCCTCTTGGATTGTGACAGTGATCTTGCTAGTACTACCCTTAGTGTTCCCAATACCAATTCACCTGACTCCCAATGGGTTGTTGATCCTGGAGAACATAAATCCTCTGTACTTCCAAACCCTGTTCTTAGTAGTCATGAGCTTGTCAATGAGTTGTTGGCTCATAATATCTTTAGCGATAGCACATCTATATTGCAATATCAAAAGGGGTTGGAGGAGGCAAGTAAGTTTCTTCCAGTGGGTACCCAGTTGAATATTGATCTTGGCAGTAGCATGGTACCAGGAGTAGTTTCTAAGACGGAGAATTCGCCGAATGGATTGAAGCGAAGGAAGAGTCGTGAACGTGAAGATGTGGACTTGGATTCAGAAGAAGGGAGGAGAAACAAGCATTCAACCATTTCTGTGGATGAGGAAGAATTATCCGAGATGTTTGATAAGGTTTTACTTCATGATTGTGGAAATGAGATTACTGCAAATGGTGGGCGTGAAAATTTGCAGTATAACGGTCAACTTCATGGATCGATTACTTCAAAAGCTCGGGAAAAGAAACAGGAGAAGAGAAAAGACTCTGTGGATTTGAGAAATCTTCTGATATTATGCGCACAAGCTGTGTCTTCTGATGATCGTCGGATTGCGTATGAACTGCTTAAGCAGATTAGACAGCATTCTACAATCATTGGGGATGGTTTTCAAAGAATGGCTCATTTCTTTGCTAATGCTCTTGAGGCTCGTATGGTTGGGACTGGCACAGGAAGTAGAATCTACTATGAATCATTAGCTCAAAGCAAAATTTCAGCTGCTGATATGTTGAAAGCTTACCAAGCTCACTTATCATCCTGCCCTTTTAAGAAGCTCTCACTCTTTTTCATGATTAAAATGATTTTGAAGGTTGCTGAGAATGCTAAAAGTCTTCATGTTATTGATTTTGGCATTTGTTATGGTTTCTTATGGCCAATGTTAATTCAGTTTCTTGCACAACTACCTGATGGTCCTCCCAATCTACGCATTACCGGTATAGATCATCCTCTACCAGGATTTCGTCCAGCAGAAAAGATCGTCGAGTCAGGCCGTCGTTTGGAAAAATACTGTGAGCGGTTTAATGTTCCTTTTCAATATCAAGCCATACCATCAAATAACTGGGAAACTATCCGAGTTGAGGACTTAAAGCTCGATAGCAATGACGTGCTTGTTGTGAACTGTTTCTACAGGTTTAACAACCTACTTGACGAAACTGTTGAAGAAAGTAGTCCACGGGACGCTGTTCTTCGTTTAATAAGGAAGATGAATCCAAACATCTTTGTACATTCTGTGGTTAATGGATCCTACCATGCGCCATTCTTCATAACACGATTCAGGGAAGCACTCTTCCATTTCTCTGCATTATATGATGCTCTAGACGTTAATTTACCTCGTGACAGCGATGAGAGGATGATGCTAGAGAGAGAGTTTCTCGGTCGCCAAATTATGAACGTCGTAGCATGTGAGGGTGTCCAAAGGGTTGAGAGGCCTGAAACCTATAAGCAATGGCAGGTTAGATGTATGAGGGCAGGTTTCAAGCAACTTCCTTTAGACAAAGAGATCATGAACAAGTTTAGGAGCAAACTAACATCCTATTACCACAAAGATTTTGTACTAGATGAAGATGAGGGTTGGATGCTTCAAGGATGGAAAGGCCGGATCGTCTATGCTTCTTGTTGCTGGGTACCAGCATAG 2316 41.8 MPYRHSQSVCFQERTGNHNFNFINLITHRLIHPLLHRLLFPCFYLSFILGFCFYLEAYITMDHPNLNDFPVRGIDYQTPLTQFHDQTSLPTSYLYPEFENSFVFNNPSPDLVPFVDPNGSSAAELKLSEGVASSGRSPGGDSSSDESDFRESVLKYISQMLMEENLEEKPCMFYDPLGLEVTEKSFYDALVKSYPPSPNQPPLLDCDSDLASTTLSVPNTNSPDSQWVVDPGEHKSSVLPNPVLSSHELVNELLAHNIFSDSTSILQYQKGLEEASKFLPVGTQLNIDLGSSMVPGVVSKTENSPNGLKRRKSREREDVDLDSEEGRRNKHSTISVDEEELSEMFDKVLLHDCGNEITANGGRENLQYNGQLHGSITSKAREKKQEKRKDSVDLRNLLILCAQAVSSDDRRIAYELLKQIRQHSTIIGDGFQRMAHFFANALEARMVGTGTGSRIYYESLAQSKISAADMLKAYQAHLSSCPFKKLSLFFMIKMILKVAENAKSLHVIDFGICYGFLWPMLIQFLAQLPDGPPNLRITGIDHPLPGFRPAEKIVESGRRLEKYCERFNVPFQYQAIPSNNWETIRVEDLKLDSNDVLVVNCFYRFNNLLDETVEESSPRDAVLRLIRKMNPNIFVHSVVNGSYHAPFFITRFREALFHFSALYDALDVNLPRDSDERMMLEREFLGRQIMNVVACEGVQRVERPETYKQWQVRCMRAGFKQLPLDKEIMNKFRSKLTSYYHKDFVLDEDEGWMLQGWKGRIVYASCCWVPA 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36606469 36608784 - CrPI670011_02g023090.1 Cre02g2309 491590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2309 771 MobiDBLite consensus disorder prediction 128 148 - -
Cre02g2309 771 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 380 768 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cre02g2309 771 MobiDBLite consensus disorder prediction 305 333 - -
Cre02g2309 771 MobiDBLite consensus disorder prediction 294 333 - -
Cre02g2309 771 ProSiteProfiles GRAS family profile. 385 769 IPR005202 -
Cre02g2309 771 Pfam GRAS domain family 394 768 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2309 Cre-Chr2:36606469 Cre09g0930 Cre-Chr9:9445925 8.50E-57 dispersed
Cre05g1321 Cre-Chr5:14285757 Cre02g2309 Cre-Chr2:36606469 8.00E-44 transposed
Cre09g1895 Cre-Chr9:37683600 Cre02g2309 Cre-Chr2:36606469 6.70E-46 transposed
Cre10g2227 Cre-Chr10:36712493 Cre02g2309 Cre-Chr2:36606469 5.50E-157 wgd
Cre02g2309 Cre-Chr2:36606469 Cre03g0450 Cre-Chr3:2911442 9.50E-149 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
53228 PF03514 GRAS 1.00E-104 CL0063 Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2309 K27753 - csv:101203568 1174.46