Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2322 ATGGGTAACGGGATTGGGAAGCTCGGCGTTTGCTTCACCGGAATCAACGACGGTAGGCGGCGGCCGGATATTTCCGTTCTGTTAACAAATCCACTAGATGAAGGTCTGGGGCACTCGTTTTGCTATGTCCGGCCGGATCCCTTAAGACTTTCGTCATCAAAAGTTCATTCCGAAGAAACCACCACTTTCCGATCAATCTCCGGCGCCTCTGTAAGTGCAAATACATCAACGCCTCTTTCTACTGCTCTTGTTGATCTGTATTCATACAATAGCATTGATCGAGCGGCGGCGTTTGAGAGTTCAACTTCTTTCGCTTCAATCCCTTTGCAACCGATCCCTAGAAACATGATAAATTCTGGTCCGATTTCCGGGAATTTCAATGGAATCCCCTGTTCTGGGCCTTTGGAAAGAGGGTTTTTATCGGGTCCAATCGAGCGAGGGTTTATGTCGGGTCCACTGGATCGGGGGATTTTTTCGGGTCCTCTTGAAAATTCTACATCCACTGAATTTCAGAGGAGTTTTTCTCATGGTGGTGGGTTTAATTCCAGATCTAGATCAAGAAAAAGCCGGTTAATTCGAATTCTGAGAACTGCAATTTCCAAGTCGATTCATCGAGGGCAAAATTCCATTGTGGCTCCGATTAAACCGGTTAAAGAACCCGATTGGATCGTCTTGCCCGAGAAGCATAACGAGAATTTGACTGTGAGTAGTTTGAATTTCAGTAGTGAAGGGAGTTTGGAGGATGATGATTCAATGGAAAGCCAAAATCTGCAGTGGGCTCAAGGAAAAGCAGGGGAAGATCGAGTTCATGTTGTGGTTTCTGAAGAACATGGATGGGTTTTCGTTGGGATTTATGATGGATTTAACGGTCCTGATGCTCCTGATTATCTCTTGTCCAATTTATATTCCTCTGTTCATAAAGAACTTAAAGGTTTGTTATGGGACGAAAAGCTCGATTCCGCGGGTGTTGCTGCTCCGGCAACTTCCCCTGTTCGTTTTGAGAATCCATGTTTAGAAACAAGAGATTTGGAGAGGAATCGAGTGAGTGATGCTTGTTCTCAATGTGTAGAACAAGAGAATCATCCTTGTGTTAGTGGAGATGGGAATTCTGGATTGAATTCTAGGAAAAGAAAAGGTAAGAATTTAAGAGGAAAGTTTAGAGGAGCTGCTGAGAAGTGGGAGGATAATCAACGGCGGTGGAAGTGTGAATGGGACCGAGAAAGATTAGAACTCGATCGGAGGTTAAAGGAGCAGTTGAATCGATCGGGATCGAACGGTTCGAGGTCGATTAATCATTCAGATGTTCTCAAAGCCCTATCCCAAGCATTGAAGAAAACAGAGGAGGCCTATTTGGATATTGCAGACAAGATGCTTGATGAAAATCCTGAACTGGCTTTGATGGGTTCTTGTGTGCTTGTGATGCTTATGAAAGGAGATGATGTTTATGTGATGAATGTTGGTGACAGCCGAGCTGTTTTAGCGCAGAAGGCGGAGCCTGATTATTGGCTCGGGAAGATTCGACAAGACTTGGAGAGGATTAATGAAGAGCCAGTTCATGACATTGAAGCATTAGATTGTGATAGAGCATTCACTTCTACTAACCTTACTGCTTTTCAGCTTTCTATGGATCATAGTACAAGTGTTGATGAGGAAGTTCAGAGAATAAGAAATGAACACCCTGATGATCCTAATGCCGTGATGAACGACCGTGTTAAAGGCTCGTTGAAAGTTACTCGGGCGTTCGGTGCTGGTTTCCTTAAACAGCCTAAATGGAACAATGCATTGTTAGAGATGTTCAGAATCGACTATGTCGGGAGATCGCCATACATCAATTGTTTACCATCTCTCCACCACCATAGATTGGGACCAAAAGACAGGTTTTTGATACTATCATCTGATGGACTCTACCAATACTTCACAAATGAAGAAGCTGTTTCTGAAGTCGAACTTTTCATCGCATTGCAACCTGAAGGAGACCCGGCTCAACATCTGGTTGAATTACTTCTGTTTCGGGCTGCAAAGAGAGCTGGTATGGATTTCCATGAGTTACTCGAAATACCGCAGGGCGACCGGAGGAAGTATCACGACGATGTATCAATCATTGTAATTTCATTAGAAGGAAGGATATGGAGATCTTGTGTATAA 2145 43.87 MGNGIGKLGVCFTGINDGRRRPDISVLLTNPLDEGLGHSFCYVRPDPLRLSSSKVHSEETTTFRSISGASVSANTSTPLSTALVDLYSYNSIDRAAAFESSTSFASIPLQPIPRNMINSGPISGNFNGIPCSGPLERGFLSGPIERGFMSGPLDRGIFSGPLENSTSTEFQRSFSHGGGFNSRSRSRKSRLIRILRTAISKSIHRGQNSIVAPIKPVKEPDWIVLPEKHNENLTVSSLNFSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYSSVHKELKGLLWDEKLDSAGVAAPATSPVRFENPCLETRDLERNRVSDACSQCVEQENHPCVSGDGNSGLNSRKRKGKNLRGKFRGAAEKWEDNQRRWKCEWDRERLELDRRLKEQLNRSGSNGSRSINHSDVLKALSQALKKTEEAYLDIADKMLDENPELALMGSCVLVMLMKGDDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEEPVHDIEALDCDRAFTSTNLTAFQLSMDHSTSVDEEVQRIRNEHPDDPNAVMNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGRSPYINCLPSLHHHRLGPKDRFLILSSDGLYQYFTNEEAVSEVELFIALQPEGDPAQHLVELLLFRAAKRAGMDFHELLEIPQGDRRKYHDDVSIIVISLEGRIWRSCV 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36713279 36715988 + CrPI670011_02g023220.1 Cre02g2322 491603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2322 714 Coils Coil 436 456 - -
Cre02g2322 714 ProSiteProfiles PPM-type phosphatase domain profile. 249 705 IPR001932 -
Cre02g2322 714 FunFam probable protein phosphatase 2C 4 224 710 - -
Cre02g2322 714 Gene3D - 227 710 IPR036457 -
Cre02g2322 714 SMART PP2C_4 250 703 IPR001932 -
Cre02g2322 714 SUPERFAMILY PP2C-like 263 706 IPR036457 -
Cre02g2322 714 CDD PP2Cc 431 705 IPR001932 -
Cre02g2322 714 Pfam Protein phosphatase 2C 438 498 IPR001932 -
Cre02g2322 714 Pfam Protein phosphatase 2C 532 655 IPR001932 -
Cre02g2322 714 PANTHER PROTEIN PHOSPHATASE 2C 240 705 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2322 Cre-Chr2:36713279 Cre05g0741 Cre-Chr5:6587051 1.90E-63 dispersed
Cre10g0436 Cre-Chr10:3246203 Cre02g2322 Cre-Chr2:36713279 4.80E-135 transposed
Cre02g2322 Cre-Chr2:36713279 Cre04g0912 Cre-Chr4:27800486 1.10E-196 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2322 - - - 0.0