Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g2324 | ATGGTTGGAATGGGGCAAAAGGATGCGTATGTTGGGGATGAAGCTCAGTCGAAACGTGGTATATTAACACTGAAATATCCCATTGAACATGGTATAGTGAGCAATTGGGACGATATGGAGAAAATTTGGCATCATACCTTTTACAATGAACTCCGAGTGGCTCCTGAAGAGCACCCTGTCCTTCTCACTGAAGCACCTCTGAACCCTAAGGCAAACCGTGAAAAAATGACCCAAATCATGTTCGAAACCTTCAACACTCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCCCTCTATGCTAGTGGACGCACAACTGGTATTGTCTTAGATTCTGGAGACGGTGTTAGTCACACTGTCCCAATTTACGAGGGGTATGCTCTTCCCCACGCCATACTCCGTCTTGACCTTGCTGGCCGTGACCTCACTGATGCCCTTATGAAAATCTTGACTGAACGTGGGTATTCCTTCACCACCACAGCTGAGCGTGAAATTGTGAGGGACATGAAGGAAAAACTAGCATATATTGCCCTTGACTTTGAGCAAGAACTTGAAACTTCCAAGACTGGTTCATCTGTTGAGAAGAGTTACGAACTGCCTGATGGGCAGGTAATCACAATTGGTGCAGAACGTTTTCGATGTCCTGAAGTTCTTTTCCAGCCTTCAATGATTGGAATGGAAGCTGCAGGCATTCATGAAACAACATATAACTCCATCATGAAATGTGATGTTGATATCAGGAAAGATCTGTATGGAAATATTGTTCTTAGTGGTGGATCAACCATGTTCCCTGGTATTGCTGACAGAATGAGCAAAGAAATAACTGCATTAGCCCCTAGCAGCATGAAAATAAAGGTGGTAGCCCCACCCGAAAGAAAGTACAGTGTCTGGATTGGTGGCTCCATTTTGGCCTCCCTCAGCACGTTTCAGCAGATGTGGATCGCAAAGGCAGAGTATGATGAGTCTGGTCCATCCATTGTGCACAGGAAATGCTTCTGA | 999 | 45.15 | MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDFEQELETSKTGSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF | 332 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 36726534 | 36728143 | - | CrPI670011_02g023240.1 | Cre02g2324 | 491605 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g2324 | 332 | FunFam | Putative actin-related protein 5 | 296 | 324 | - | - | |
Cre02g2324 | 332 | CDD | NBD_sugar-kinase_HSP70_actin | 31 | 138 | - | - | |
Cre02g2324 | 332 | Gene3D | Actin; Chain A, domain 4 | 137 | 228 | - | - | |
Cre02g2324 | 332 | FunFam | Actin, muscle | 137 | 228 | - | - | |
Cre02g2324 | 332 | SUPERFAMILY | Actin-like ATPase domain | 104 | 332 | IPR043129 | - | |
Cre02g2324 | 332 | PANTHER | ACTIN | 6 | 324 | IPR004000 | GO:0005737(PANTHER) | |
Cre02g2324 | 332 | FunFam | Actin, alpha skeletal muscle | 1 | 139 | - | - | |
Cre02g2324 | 332 | Pfam | Actin | 7 | 332 | IPR004000 | - | |
Cre02g2324 | 332 | ProSitePatterns | Actins and actin-related proteins signature. | 61 | 73 | IPR020902 | - | |
Cre02g2324 | 332 | ProSitePatterns | Actins signature 1. | 10 | 20 | IPR004001 | - | |
Cre02g2324 | 332 | SMART | actin_3 | 1 | 332 | IPR004000 | - | |
Cre02g2324 | 332 | SUPERFAMILY | Actin-like ATPase domain | 1 | 110 | IPR043129 | - | |
Cre02g2324 | 332 | ProSitePatterns | Actins signature 2. | 313 | 321 | IPR004001 | - | |
Cre02g2324 | 332 | Gene3D | - | 2 | 326 | - | - | |
Cre02g2324 | 332 | PRINTS | Actin signature | 97 | 116 | IPR004000 | - | |
Cre02g2324 | 332 | PRINTS | Actin signature | 6 | 17 | IPR004000 | - | |
Cre02g2324 | 332 | PRINTS | Actin signature | 18 | 40 | IPR004000 | - | |
Cre02g2324 | 332 | PRINTS | Actin signature | 72 | 85 | IPR004000 | - | |
Cre02g2324 | 332 | PRINTS | Actin signature | 193 | 209 | IPR004000 | - | |
Cre02g2324 | 332 | FunFam | Major actin | 214 | 295 | - | - | |
Cre02g2324 | 332 | Gene3D | - | 95 | 295 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g2324 | Cre-Chr2:36726534 | Cre10g1871 | Cre-Chr10:33285010 | 2.10E-190 | dispersed | |
Cre01g0489 | Cre-Chr1:4215697 | Cre02g2324 | Cre-Chr2:36726534 | 6.60E-188 | wgd | |
Cre02g2324 | Cre-Chr2:36726534 | Cre04g0915 | Cre-Chr4:27828040 | 8.10E-190 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g2324 | K10355 | - | mdm:103424317 | 662.144 |