Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2408 ATGCAGAAAGAGTTGTACTCATACTGCTCACTGCTAACTGTTCTGTTGGGAAGCTTAGCAATAGGACACTTGAATGAGGTGGGGAAGAATGCATATTGCTATGGAAATTGTGAAGAGGGTCTTTGCAATTGTTGCTTATCCTCTTCAACTTCTTCTTGTTCCTCAAATTCATCGCCAACGCCCGCCTCTTCTTCAACCTATTTGGAGCTTTGGCATGCTTGTGCTGGTCCTCTCACCTCATTGCCCAAGAAAGGAAATGTAGTTGTCTATTTCCCACAAGGTCACTTGGAACAAATTGCCTCAGCCTCTCCCTTTTCCCCCATGGAGATGCGCACTTTTGACCTTCAGCCACAGATCCTCTGCAGGGTCATCAATGTCCACCTACTTGCCAATAAGGAGAATGATGAGGTCTATACACAGCTTACTCTCCTTCCCTTGCCAGAGTTAGTAGGCACTGGTCTAGAGGGCAAAGAGCTGGAGGAATTGGCGTTGAATGGGGCTGATGGAGATGGGAGTGGAGGGTCGCCTACTAGATCTACACCTCACATGTTCTGCAAAACACTCACAGCGTCTGACACGAGCACCCATGGAGGATTCTCTGTTCCTCGCAGAGCTGCTGAAGACTGTTTCCCTCCTCTGGATTACACTCAGCTTAGGCCATCTCAAGAGCTAATAGCCAAGGACCTGCATGGCGTGGAGTGGAGATTTAAACATATTTACAGAGGTCAACCTAGGCGGCATCTGCTCACTACTGGATGGAGTATTTTTGTAAGCCAAAAGAATCTTATTTCTGGGGATGCAGTGCTGTTTTTAAGGGGTGAGAATGGAGAGTTAAGGTTGGGAATAAGGCGAGCTGTTCGGCCTAGAAATGGTCTTCCTGTTTCAATTGTTGGCAGCCAAAATCCTTGTGCAAACGATCTTGCTCGTGTGGTGAAAGCAATATCCACCAAGAGCACATTTGATGTGTTTTATAATCCAAGGGCATATCATGCACAATTTGTTATATCTTGTCAGAAGTATGTGAAGAGCATCAATAATCCGGTGACTGTAGGCACAAGATTCAAAATGAGATTTGAGATGGATGATTCGCCAGAAAGAAGGTTTAATGGTGTAGTTGTCGGAATTGGTGACATGGATCCCTTTAGATGGCCGAACTCAAAGTGGAGATGCTTAACGGTCCGATGGGATAAAGACAGTGATCATCAAGAACGTGTTTCCCCCTGGGAGATTGATCCTTCTGTTTCTCTCCCACCCTTGAGCGTTCAGTCGTCTCCAAGACTGAAGAAGCTGAGGACTAGTCTGCAGGCAGCCCCACCTAATAACGCCTTTACTGGGAGGGGCGGTTTTATGGACTTTGAGGATTCAATTAGATCCTCTAAGGTCTTGCAAGGTCAAGAAAATGTAGGTGTTGTATCACCCTTTTATGGATGTGATACTGCGAAACGTTCACTGGAGTTTGATGTGCGATCTTCTGCACAACAAAACCAAGTGTCAGGTGGAGTTGAAAAACTCAATATAGGTGATTATGTAAAGGTTCATGCGAACTCTTCTTTCACAGGCTTTATGGAATCTGATAGATTTCTGAAGGTCTTGCAAGGTCAAGAAATATGCTCATTGAGGCCACCAACTAGAAAACCAGAATATAGTTTAGGTGTTTGGGGGAAGTTCAATCTCAGTGACAACTCTTTTAACACATTTCAATCACCAAACTCCAATTTTTATCACATGGCGTCTAATGGTGCCCAAAACATGTATTTCCCTCATAGTGAAATGTACAGTACTGGCCAAGCGGCCATGATGCGCTCAAATGATAGCAACTTTCCAAGAGAGAATGCCTTGTTCAACCCATCTGCTGTTGGTGCTAGTGTTATCAGGACCAAAATGGAAAGGACTAATTGTTCACTTGATCGGGAGTCTCTACATCTAGTGTCTGCTCCTCCAACTTTAGGGTCGAATATGAGGAATTCAAAGGATGAAAATGTGAGTGAGAACCCAACTGGCTGTAAACTTTTTGGCTTTTCATTGACTACGGAAACTGCTACAAACATGCAAAGTTCAGGAAAGAGAAGTTGTACCAAGGTTCACAAACAAGGCAGCCTGGTGGGAAGAGCTATTGATCTCTCTAGGCTGAATGGCTATCCCGATCTGATTTCTGAACTGGAGCGGTTGTTTAGCATGGAAGGTCTCTTAAAAGATCCTGATAAAGGATGGCGAGTGTTGTACACTGACAACGAAAATGACGTAATGGTTGTTGGGGATTATCCATGGCGTGACTTCTGTGACGCGGTTTCCAAAATCCATATATACACTCAAGAAGAAGTGGAAAAGATGACAAATGGAGTGATCAGTGATGATACTCAAAGCTGCTTAGACCAGGCTCCTTTATGTATGGAAGCATCAAAATCCTCTTCAGTGGGCCAACCTGATTCTCCTCCAACAGTCCTCGAAGTCGGTAGCTTTGCTGCCATGAACGGCGTCATATAG 2484 44.69 MQKELYSYCSLLTVLLGSLAIGHLNEVGKNAYCYGNCEEGLCNCCLSSSTSSCSSNSSPTPASSSTYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASASPFSPMEMRTFDLQPQILCRVINVHLLANKENDEVYTQLTLLPLPELVGTGLEGKELEELALNGADGDGSGGSPTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPVSIVGSQNPCANDLARVVKAISTKSTFDVFYNPRAYHAQFVISCQKYVKSINNPVTVGTRFKMRFEMDDSPERRFNGVVVGIGDMDPFRWPNSKWRCLTVRWDKDSDHQERVSPWEIDPSVSLPPLSVQSSPRLKKLRTSLQAAPPNNAFTGRGGFMDFEDSIRSSKVLQGQENVGVVSPFYGCDTAKRSLEFDVRSSAQQNQVSGGVEKLNIGDYVKVHANSSFTGFMESDRFLKVLQGQEICSLRPPTRKPEYSLGVWGKFNLSDNSFNTFQSPNSNFYHMASNGAQNMYFPHSEMYSTGQAAMMRSNDSNFPRENALFNPSAVGASVIRTKMERTNCSLDRESLHLVSAPPTLGSNMRNSKDENVSENPTGCKLFGFSLTTETATNMQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYPDLISELERLFSMEGLLKDPDKGWRVLYTDNENDVMVVGDYPWRDFCDAVSKIHIYTQEEVEKMTNGVISDDTQSCLDQAPLCMEASKSSSVGQPDSPPTVLEVGSFAAMNGVI 827
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37450912 37458700 - CrPI670011_02g024080.1 Cre02g2408 491689

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2408 827 FunFam Auxin response factor 347 417 - -
Cre02g2408 827 Pfam AUX/IAA family 736 774 IPR033389 -
Cre02g2408 827 MobiDBLite consensus disorder prediction 645 663 - -
Cre02g2408 827 Gene3D - 348 417 - -
Cre02g2408 827 SUPERFAMILY DNA-binding pseudobarrel domain 178 293 IPR015300 -
Cre02g2408 827 CDD B3_DNA 182 284 IPR003340 GO:0003677(InterPro)
Cre02g2408 827 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 66 779 IPR044835 GO:0003677(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro)
Cre02g2408 827 SMART B3_2 184 286 IPR003340 GO:0003677(InterPro)
Cre02g2408 827 Pfam Auxin response factor 311 391 IPR010525 GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro)
Cre02g2408 827 FunFam Auxin response factor 182 286 - -
Cre02g2408 827 ProSiteProfiles PB1 domain profile. 689 773 IPR053793 -
Cre02g2408 827 SUPERFAMILY CAD & PB1 domains 691 768 - -
Cre02g2408 827 Pfam B3 DNA binding domain 184 285 IPR003340 GO:0003677(InterPro)
Cre02g2408 827 Gene3D - 685 778 - -
Cre02g2408 827 MobiDBLite consensus disorder prediction 644 663 - -
Cre02g2408 827 ProSiteProfiles B3 DNA-binding domain profile. 184 286 IPR003340 GO:0003677(InterPro)
Cre02g2408 827 Gene3D - 182 286 IPR015300 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2408 K14486 - - csv:101212503 1482.23
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2408 Cre-Chr2:37450912 Cre06g2687 Cre-Chr6:34327108 1.20E-138 dispersed
Cre04g1948 Cre-Chr4:36969652 Cre02g2408 Cre-Chr2:37450912 1.30E-126 transposed
Cre02g2408 Cre-Chr2:37450912 Cre04g0998 Cre-Chr4:28593359 1.70E-63 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi6g293 . . Bda02g00770 Bda09g01469 . . . . . . . . . . . Cpe05g00832 . . . . . . . . Cla02g02048 Cam02g2172 Cec02g2211 Cco02g2251 Clacu02g2157 Cmu02g2094 Cre02g2408 Cone1ag0715 Cone5ag1219 . . . . Chy11g01328 Cme11g01785 Blo13g01112 Blo14g00164 . . Bpe08g00146 . Bma07g00137 . Sed05g2864 Cmo02g00880 Cmo20g00509 Cma02g00881 Cma20g00475 . Car20g00416 . . Bhi10g00565 Tan05g0270 Cmetu11g0119 . Hepe08g0874 . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cre09g0880 . 29 710 B3 DNA Binding Superfamily AT3G24650 50.3 1.2e-116 417.9
Cre09g1710 . 68 277 B3 DNA Binding Superfamily AT3G26790 56.6 4.1e-66 248.8
Cre04g1922 . 170 325 B3 DNA Binding Superfamily AT1G28300 58.0 4.9e-39 159.1
Cre05g2474 . 1 348 B3 DNA Binding Superfamily AT1G25560 59.4 3.4e-109 392.1
Cre03g1277 . 34 311 B3 DNA Binding Superfamily AT1G25560 63.9 2.9e-92 335.9
Cre10g1985 . 41 155 B3 DNA Binding Superfamily AT1G25560 66.1 2.9e-39 159.8
Cre06g1000 . 71 200 B3 DNA Binding Superfamily AT1G25560 57.6 2.1e-37 153.7
Cre09g2381 . 30 138 B3 DNA Binding Superfamily AT1G25560 66.1 4.6e-37 152.5
Cre09g2381 . 29 143 B3 DNA Binding Superfamily AT1G01030 82.8 3.3e-53 206.1
Cre05g2474 . 183 306 B3 DNA Binding Superfamily AT1G01030 62.2 8.6e-38 154.8
Cre04g0998 . 14 696 B3 DNA Binding Superfamily AT4G30080 59.6 8.4e-218 753.8
Cre02g2429 . 4 686 B3 DNA Binding Superfamily AT4G30080 57.5 2.5e-214 742.3
Cre08g0705 . 5 688 B3 DNA Binding Superfamily AT4G30080 54.7 3.7e-197 685.3
Cre03g0329 . 4 736 B3 DNA Binding Superfamily AT2G30470 51.7 6.6e-198 688.0
Cre01g0684 . 173 518 B3 DNA Binding Superfamily AT3G18990 57.5 1.7e-95 346.7
Cre11g0526 . 5 676 B3 DNA Binding Superfamily AT1G59750 68.0 3.4e-248 854.7
Cre09g0908 . 14 676 B3 DNA Binding Superfamily AT1G59750 50.8 6.4e-170 594.7
Cre04g2093 . 58 418 B3 DNA Binding Superfamily AT1G59750 55.6 1.6e-107 387.5
Cre11g1577 . 20 401 B3 DNA Binding Superfamily AT1G59750 51.9 1.6e-107 387.5
Cre03g1075 . 23 396 B3 DNA Binding Superfamily AT1G59750 53.2 3.2e-105 379.8
Cre11g0629 . 23 380 B3 DNA Binding Superfamily AT1G59750 53.4 3.0e-103 373.2
Cre05g2020 . 42 379 B3 DNA Binding Superfamily AT1G59750 52.2 1.7e-98 357.5
Cre02g2429 . 3 686 B3 DNA Binding Superfamily AT2G28350 58.6 1.4e-209 726.5
Cre04g0998 . 13 696 B3 DNA Binding Superfamily AT2G28350 55.4 2.3e-199 692.6
Cre08g0705 . 13 694 B3 DNA Binding Superfamily AT2G28350 50.5 1.6e-173 606.7
Cre09g0908 . 14 691 B3 DNA Binding Superfamily AT2G46530 56.2 2.6e-189 659.1
Cre07g1510 . 18 694 B3 DNA Binding Superfamily AT2G46530 53.1 2.3e-177 619.4
Cre09g2333 . 82 737 B3 DNA Binding Superfamily AT2G46530 53.6 2.3e-177 619.4
Cre11g0526 . 13 666 B3 DNA Binding Superfamily AT2G46530 50.8 7.1e-163 571.2
Cre04g2093 . 36 403 B3 DNA Binding Superfamily AT2G46530 51.9 1.6e-98 357.5
Cre03g1075 . 1 368 B3 DNA Binding Superfamily AT2G46530 50.4 1.3e-95 347.8
Cre11g1577 . 21 376 B3 DNA Binding Superfamily AT2G46530 50.4 3.6e-90 329.7
Cre04g0998 . 14 696 B3 DNA Binding Superfamily AT4G30080 59.6 8.4e-218 753.8
Cre02g2429 . 4 686 B3 DNA Binding Superfamily AT4G30080 57.5 2.5e-214 742.3
Cre08g0705 . 5 688 B3 DNA Binding Superfamily AT4G30080 54.7 3.7e-197 685.3
Cre09g0908 . 50 678 B3 DNA Binding Superfamily AT3G61830 54.3 2.1e-174 609.4
Cre07g1510 . 54 671 B3 DNA Binding Superfamily AT3G61830 51.8 4.2e-159 558.5
Cre09g2333 . 119 744 B3 DNA Binding Superfamily AT3G61830 51.5 2.1e-158 556.2
Cre11g0526 . 53 647 B3 DNA Binding Superfamily AT3G61830 51.8 3.1e-154 542.3
Cre04g2093 . 86 399 B3 DNA Binding Superfamily AT3G61830 53.5 1.6e-86 317.4
Cre03g1075 . 51 364 B3 DNA Binding Superfamily AT3G61830 51.7 1.3e-83 307.8
Cre11g0629 . 1 1090 B3 DNA Binding Superfamily AT1G19220 63.7 0.0e+00 1188.7
Cre09g1706 . 132 513 B3 DNA Binding Superfamily AT1G19220 56.7 3.4e-112 403.7
Cre06g2687 . 41 396 B3 DNA Binding Superfamily AT1G19220 52.5 2.6e-104 377.5
Cre11g0526 . 26 387 B3 DNA Binding Superfamily AT1G19220 51.0 1.4e-97 355.1
Cre09g0908 . 20 224 B3 DNA Binding Superfamily AT1G43950 56.1 1.8e-60 229.6
Cre07g1510 . 24 228 B3 DNA Binding Superfamily AT1G43950 56.8 2.6e-59 225.7
Cre09g2333 . 81 293 B3 DNA Binding Superfamily AT1G43950 53.5 2.2e-58 222.6
Cre11g0526 . 19 227 B3 DNA Binding Superfamily AT1G43950 51.2 7.2e-57 217.6
Cre06g2687 . 41 246 B3 DNA Binding Superfamily AT1G43950 51.9 1.8e-55 213.0
Cre04g1948 . 149 434 B3 DNA Binding Superfamily AT2G33860 66.9 1.1e-109 394.0
Cre02g2408 . 183 466 B3 DNA Binding Superfamily AT2G33860 57.0 1.5e-90 330.5
Cre06g2687 . 147 436 B3 DNA Binding Superfamily AT2G33860 51.0 5.7e-77 285.4
Cre04g2093 . 162 393 B3 DNA Binding Superfamily AT2G33860 56.5 2.3e-70 263.5
Cre03g1075 . 127 358 B3 DNA Binding Superfamily AT2G33860 56.5 3.0e-70 263.1
Cre11g0629 . 126 356 B3 DNA Binding Superfamily AT2G33860 54.5 7.4e-69 258.5
Cre11g1577 . 134 365 B3 DNA Binding Superfamily AT2G33860 54.7 1.3e-68 257.7
Cre07g1510 . 129 356 B3 DNA Binding Superfamily AT2G33860 51.9 3.7e-68 256.1
Cre05g2020 . 149 407 B3 DNA Binding Superfamily AT2G33860 53.5 6.3e-68 255.4
Cre09g0908 . 125 352 B3 DNA Binding Superfamily AT2G33860 52.4 2.6e-66 250.0
Cre09g2333 . 194 421 B3 DNA Binding Superfamily AT2G33860 51.1 3.2e-64 243.0
Cre02g2408 . 62 817 B3 DNA Binding Superfamily AT5G60450 60.4 4.2e-250 861.3
Cre04g1948 . 41 443 B3 DNA Binding Superfamily AT5G60450 55.8 2.0e-122 437.2
Cre03g1075 . 7 377 B3 DNA Binding Superfamily AT5G60450 50.4 1.7e-102 370.9
Cre11g0629 . 14 374 B3 DNA Binding Superfamily AT5G60450 50.1 8.9e-99 358.6
Cre05g2020 . 8 937 B3 DNA Binding Superfamily AT1G19850 61.2 3.6e-293 1004.6
Cre09g1706 . 142 513 B3 DNA Binding Superfamily AT1G19850 52.9 2.6e-105 380.6
Cre11g0526 . 16 357 B3 DNA Binding Superfamily AT1G19850 52.5 1.8e-98 357.8
Cre07g1510 . 24 355 B3 DNA Binding Superfamily AT1G19850 51.3 1.3e-93 341.7
Cre04g2093 . 36 939 B3 DNA Binding Superfamily AT1G30330 68.9 0.0e+00 1201.4
Cre03g1075 . 1 898 B3 DNA Binding Superfamily AT1G30330 70.6 0.0e+00 1167.1
Cre09g1706 . 132 513 B3 DNA Binding Superfamily AT1G30330 72.8 1.9e-151 533.9
Cre11g0526 . 23 383 B3 DNA Binding Superfamily AT1G30330 54.0 4.3e-103 373.2
Cre06g2687 . 41 395 B3 DNA Binding Superfamily AT1G30330 52.5 6.8e-101 365.9
Cre09g0908 . 7 352 B3 DNA Binding Superfamily AT1G30330 54.1 6.8e-101 365.9
Cre07g1510 . 24 379 B3 DNA Binding Superfamily AT1G30330 52.6 2.0e-100 364.4
Cre09g2333 . 92 462 B3 DNA Binding Superfamily AT1G30330 50.5 1.2e-97 355.1
Cre11g0629 . 1 1087 B3 DNA Binding Superfamily AT5G20730 58.3 0.0e+00 1109.4
Cre04g2093 . 39 530 B3 DNA Binding Superfamily AT5G20730 57.1 8.9e-151 531.9
Cre03g1075 . 4 471 B3 DNA Binding Superfamily AT5G20730 59.2 1.2e-150 531.6
Cre09g1706 . 132 513 B3 DNA Binding Superfamily AT5G20730 55.7 5.4e-108 389.8
Cre06g2687 . 41 393 B3 DNA Binding Superfamily AT5G20730 52.0 4.5e-102 370.2
Cre11g0526 . 6 360 B3 DNA Binding Superfamily AT5G20730 51.5 2.1e-96 351.3
Cre04g2093 . 132 901 B3 DNA Binding Superfamily AT5G37020 52.9 2.9e-200 695.7
Cre03g1075 . 97 861 B3 DNA Binding Superfamily AT5G37020 50.6 6.9e-186 647.9
Cre11g0629 . 96 420 B3 DNA Binding Superfamily AT5G37020 62.4 4.3e-111 399.4
Cre11g1577 . 104 461 B3 DNA Binding Superfamily AT5G37020 59.1 6.8e-109 392.1
Cre09g1706 . 229 513 B3 DNA Binding Superfamily AT5G37020 66.3 2.1e-97 354.0
Cre07g1510 . 1 697 B3 DNA Binding Superfamily AT4G23980 56.1 5.5e-203 704.5
Cre09g2333 . 85 738 B3 DNA Binding Superfamily AT4G23980 58.0 2.4e-198 689.1
Cre09g0908 . 17 676 B3 DNA Binding Superfamily AT4G23980 58.1 3.5e-197 685.3
Cre11g0526 . 16 647 B3 DNA Binding Superfamily AT4G23980 52.7 4.0e-169 592.0
Cre11g1577 . 17 385 B3 DNA Binding Superfamily AT4G23980 50.3 2.2e-98 357.1
Cre05g2020 . 46 379 B3 DNA Binding Superfamily AT4G23980 52.4 5.3e-97 352.4
Cre06g2687 . 1 845 B3 DNA Binding Superfamily AT5G62000 61.0 1.1e-291 999.6
Cre11g1577 . 8 404 B3 DNA Binding Superfamily AT5G62000 51.2 2.2e-109 394.0
Cre11g0629 . 23 381 B3 DNA Binding Superfamily AT5G62000 54.0 5.0e-106 382.9
Cre09g0880 . 29 710 B3 DNA Binding Superfamily AT3G24650 50.3 1.2e-116 417.9
Cre04g1922 . 170 325 B3 DNA Binding Superfamily AT1G28300 58.0 4.9e-39 159.1
Cre09g1710 . 68 277 B3 DNA Binding Superfamily AT3G26790 56.6 4.1e-66 248.8
Cre03g0329 . 4 736 B3 DNA Binding Superfamily AT2G30470 51.7 6.6e-198 688.0
Cre11g0629 . 1 1090 B3 DNA Binding Superfamily AT1G19220 63.7 0.0e+00 1188.7
Cre09g1706 . 132 513 B3 DNA Binding Superfamily AT1G19220 56.7 3.4e-112 403.7
Cre06g2687 . 41 396 B3 DNA Binding Superfamily AT1G19220 52.5 2.6e-104 377.5
Cre11g0526 . 26 387 B3 DNA Binding Superfamily AT1G19220 51.0 1.4e-97 355.1
Cre05g2020 . 8 937 B3 DNA Binding Superfamily AT1G19850 61.2 3.6e-293 1004.6
Cre09g1706 . 142 513 B3 DNA Binding Superfamily AT1G19850 52.9 2.6e-105 380.6
Cre11g0526 . 16 357 B3 DNA Binding Superfamily AT1G19850 52.5 1.8e-98 357.8
Cre07g1510 . 24 355 B3 DNA Binding Superfamily AT1G19850 51.3 1.3e-93 341.7
Cre04g2093 . 36 939 B3 DNA Binding Superfamily AT1G30330 68.9 0.0e+00 1201.4
Cre03g1075 . 1 898 B3 DNA Binding Superfamily AT1G30330 70.6 0.0e+00 1167.1
Cre09g1706 . 132 513 B3 DNA Binding Superfamily AT1G30330 72.8 1.9e-151 533.9
Cre11g0526 . 23 383 B3 DNA Binding Superfamily AT1G30330 54.0 4.3e-103 373.2
Cre06g2687 . 41 395 B3 DNA Binding Superfamily AT1G30330 52.5 6.8e-101 365.9
Cre09g0908 . 7 352 B3 DNA Binding Superfamily AT1G30330 54.1 6.8e-101 365.9
Cre07g1510 . 24 379 B3 DNA Binding Superfamily AT1G30330 52.6 2.0e-100 364.4
Cre09g2333 . 92 462 B3 DNA Binding Superfamily AT1G30330 50.5 1.2e-97 355.1
Cre11g0629 . 1 1087 B3 DNA Binding Superfamily AT5G20730 58.3 0.0e+00 1109.4
Cre04g2093 . 39 530 B3 DNA Binding Superfamily AT5G20730 57.1 8.9e-151 531.9
Cre03g1075 . 4 471 B3 DNA Binding Superfamily AT5G20730 59.2 1.2e-150 531.6
Cre09g1706 . 132 513 B3 DNA Binding Superfamily AT5G20730 55.7 5.4e-108 389.8
Cre06g2687 . 41 393 B3 DNA Binding Superfamily AT5G20730 52.0 4.5e-102 370.2
Cre11g0526 . 6 360 B3 DNA Binding Superfamily AT5G20730 51.5 2.1e-96 351.3
Cre04g2093 . 132 901 B3 DNA Binding Superfamily AT5G37020 52.9 2.9e-200 695.7
Cre03g1075 . 97 861 B3 DNA Binding Superfamily AT5G37020 50.6 6.9e-186 647.9
Cre11g0629 . 96 420 B3 DNA Binding Superfamily AT5G37020 62.4 4.3e-111 399.4
Cre11g1577 . 104 461 B3 DNA Binding Superfamily AT5G37020 59.1 6.8e-109 392.1
Cre09g1706 . 229 513 B3 DNA Binding Superfamily AT5G37020 66.3 2.1e-97 354.0
Cre04g1948 . 149 434 B3 DNA Binding Superfamily AT2G33860 66.9 1.1e-109 394.0
Cre02g2408 . 183 466 B3 DNA Binding Superfamily AT2G33860 57.0 1.5e-90 330.5
Cre06g2687 . 147 436 B3 DNA Binding Superfamily AT2G33860 51.0 5.7e-77 285.4
Cre04g2093 . 162 393 B3 DNA Binding Superfamily AT2G33860 56.5 2.3e-70 263.5
Cre03g1075 . 127 358 B3 DNA Binding Superfamily AT2G33860 56.5 3.0e-70 263.1
Cre11g0629 . 126 356 B3 DNA Binding Superfamily AT2G33860 54.5 7.4e-69 258.5
Cre11g1577 . 134 365 B3 DNA Binding Superfamily AT2G33860 54.7 1.3e-68 257.7
Cre07g1510 . 129 356 B3 DNA Binding Superfamily AT2G33860 51.9 3.7e-68 256.1
Cre05g2020 . 149 407 B3 DNA Binding Superfamily AT2G33860 53.5 6.3e-68 255.4
Cre09g0908 . 125 352 B3 DNA Binding Superfamily AT2G33860 52.4 2.6e-66 250.0
Cre09g2333 . 194 421 B3 DNA Binding Superfamily AT2G33860 51.1 3.2e-64 243.0
Cre02g2408 . 62 817 B3 DNA Binding Superfamily AT5G60450 60.4 4.2e-250 861.3
Cre04g1948 . 41 443 B3 DNA Binding Superfamily AT5G60450 55.8 2.0e-122 437.2
Cre03g1075 . 7 377 B3 DNA Binding Superfamily AT5G60450 50.4 1.7e-102 370.9
Cre11g0629 . 14 374 B3 DNA Binding Superfamily AT5G60450 50.1 8.9e-99 358.6
Cre11g0526 . 5 676 B3 DNA Binding Superfamily AT1G59750 68.0 3.4e-248 854.7
Cre09g0908 . 14 676 B3 DNA Binding Superfamily AT1G59750 50.8 6.4e-170 594.7
Cre04g2093 . 58 418 B3 DNA Binding Superfamily AT1G59750 55.6 1.6e-107 387.5
Cre11g1577 . 20 401 B3 DNA Binding Superfamily AT1G59750 51.9 1.6e-107 387.5
Cre03g1075 . 23 396 B3 DNA Binding Superfamily AT1G59750 53.2 3.2e-105 379.8
Cre11g0629 . 23 380 B3 DNA Binding Superfamily AT1G59750 53.4 3.0e-103 373.2
Cre05g2020 . 42 379 B3 DNA Binding Superfamily AT1G59750 52.2 1.7e-98 357.5
Cre06g2687 . 1 845 B3 DNA Binding Superfamily AT5G62000 61.0 1.1e-291 999.6
Cre11g1577 . 8 404 B3 DNA Binding Superfamily AT5G62000 51.2 2.2e-109 394.0
Cre11g0629 . 23 381 B3 DNA Binding Superfamily AT5G62000 54.0 5.0e-106 382.9
Cre09g0908 . 14 691 B3 DNA Binding Superfamily AT2G46530 56.2 2.6e-189 659.1
Cre07g1510 . 18 694 B3 DNA Binding Superfamily AT2G46530 53.1 2.3e-177 619.4
Cre09g2333 . 82 737 B3 DNA Binding Superfamily AT2G46530 53.6 2.3e-177 619.4
Cre11g0526 . 13 666 B3 DNA Binding Superfamily AT2G46530 50.8 7.1e-163 571.2
Cre04g2093 . 36 403 B3 DNA Binding Superfamily AT2G46530 51.9 1.6e-98 357.5
Cre03g1075 . 1 368 B3 DNA Binding Superfamily AT2G46530 50.4 1.3e-95 347.8
Cre11g1577 . 21 376 B3 DNA Binding Superfamily AT2G46530 50.4 3.6e-90 329.7
Cre09g0908 . 50 678 B3 DNA Binding Superfamily AT3G61830 54.3 2.1e-174 609.4
Cre07g1510 . 54 671 B3 DNA Binding Superfamily AT3G61830 51.8 4.2e-159 558.5
Cre09g2333 . 119 744 B3 DNA Binding Superfamily AT3G61830 51.5 2.1e-158 556.2
Cre11g0526 . 53 647 B3 DNA Binding Superfamily AT3G61830 51.8 3.1e-154 542.3
Cre04g2093 . 86 399 B3 DNA Binding Superfamily AT3G61830 53.5 1.6e-86 317.4
Cre03g1075 . 51 364 B3 DNA Binding Superfamily AT3G61830 51.7 1.3e-83 307.8
Cre07g1510 . 1 697 B3 DNA Binding Superfamily AT4G23980 56.1 5.5e-203 704.5
Cre09g2333 . 85 738 B3 DNA Binding Superfamily AT4G23980 58.0 2.4e-198 689.1
Cre09g0908 . 17 676 B3 DNA Binding Superfamily AT4G23980 58.1 3.5e-197 685.3
Cre11g0526 . 16 647 B3 DNA Binding Superfamily AT4G23980 52.7 4.0e-169 592.0
Cre11g1577 . 17 385 B3 DNA Binding Superfamily AT4G23980 50.3 2.2e-98 357.1
Cre05g2020 . 46 379 B3 DNA Binding Superfamily AT4G23980 52.4 5.3e-97 352.4
Cre09g0908 . 20 224 B3 DNA Binding Superfamily AT1G43950 56.1 1.8e-60 229.6
Cre07g1510 . 24 228 B3 DNA Binding Superfamily AT1G43950 56.8 2.6e-59 225.7
Cre09g2333 . 81 293 B3 DNA Binding Superfamily AT1G43950 53.5 2.2e-58 222.6
Cre11g0526 . 19 227 B3 DNA Binding Superfamily AT1G43950 51.2 7.2e-57 217.6
Cre06g2687 . 41 246 B3 DNA Binding Superfamily AT1G43950 51.9 1.8e-55 213.0
Cre02g2429 . 3 686 B3 DNA Binding Superfamily AT2G28350 58.6 1.4e-209 726.5
Cre04g0998 . 13 696 B3 DNA Binding Superfamily AT2G28350 55.4 2.3e-199 692.6
Cre08g0705 . 13 694 B3 DNA Binding Superfamily AT2G28350 50.5 1.6e-173 606.7
Cre04g0998 . 14 696 B3 DNA Binding Superfamily AT4G30080 59.6 8.4e-218 753.8
Cre02g2429 . 4 686 B3 DNA Binding Superfamily AT4G30080 57.5 2.5e-214 742.3
Cre08g0705 . 5 688 B3 DNA Binding Superfamily AT4G30080 54.7 3.7e-197 685.3
Cre09g2381 . 29 143 B3 DNA Binding Superfamily AT1G01030 82.8 3.3e-53 206.1
Cre05g2474 . 183 306 B3 DNA Binding Superfamily AT1G01030 62.2 8.6e-38 154.8
Cre05g2474 . 1 348 B3 DNA Binding Superfamily AT1G25560 59.4 3.4e-109 392.1
Cre03g1277 . 34 311 B3 DNA Binding Superfamily AT1G25560 63.9 2.9e-92 335.9
Cre10g1985 . 41 155 B3 DNA Binding Superfamily AT1G25560 66.1 2.9e-39 159.8
Cre06g1000 . 71 200 B3 DNA Binding Superfamily AT1G25560 57.6 2.1e-37 153.7
Cre09g2381 . 30 138 B3 DNA Binding Superfamily AT1G25560 66.1 4.6e-37 152.5
Cre02g0947 . 57 288 B3 DNA Binding Superfamily AT3G19184 61.8 4.0e-68 255.4
Cre08g1520 . 6 227 B3 DNA Binding Superfamily AT3G19184 54.6 6.8e-52 201.4
Cre08g1519 . 4 227 B3 DNA Binding Superfamily AT3G19184 51.7 2.7e-48 189.5
Cre08g1520 . 51 228 B3 DNA Binding Superfamily AT5G42700 58.9 1.2e-52 203.4
Cre08g1519 . 51 228 B3 DNA Binding Superfamily AT5G42700 52.8 2.8e-46 182.2
Cre02g0947 . 107 273 B3 DNA Binding Superfamily AT5G42700 56.2 6.9e-45 177.6
Cre01g0684 . 173 518 B3 DNA Binding Superfamily AT3G18990 57.5 1.7e-95 346.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006839 2 1 2 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 1 37
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
53237 PF02309 AUX_IAA 1.50E-07 CL0072 Cre TF