Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g2431 | ATGGCTTATGGTAGTTCTAGATCCGTAAGGTTCCAAGACGATCTTGAATCATCTGCCCTGCCTACTATCAATGGTGGTGGTGTGACAAAGATCATATACAACATTGATGGCACACAAATACCGGAATCGAGCGGCAAGAGAACTTCGGCTTCTAGGAAGTCTGGAAGATCCCTGAGAGCTAAAGTTTTGTCTAGAGTTTTCTCAGAGGATTATGAGAGAGTACAAAGAAAAATATTGGATCCTAGGGGACAAGTCATAAGGCGATGGAATAAGATATTTTTAGTTGCTTGTTTAGTCTCTTTGTTTGTAGACCCTCTTTTCTTTTACTTGCCTGTGGTCAGGGATGAGGTGTGCATCGATATAGGAGTAGGTCTTGAAGTCGTCCTCACAACTATAAGATCAATAGCTGATGTTTTCTACACAATTCAGATTTTCATTAAGTTTCGTACAGCTTATGTTGCGCCCTCTTCTCGTGTATTTGGGAGAGGAGAGCTTGTGATAGATCCTTTTAAGATAGCAATAAGGTATCTACGTTATGGTTTCTGGATTGATCTCATTGCAGCCGTGCCAGTTCCCCAGGTACTGATCTGGATTGTAATCCCCAACCTTAGTGGTTCAACAATGACAAACACTAAGAACTTCCTAAGGTTCTTTCTCATATTCCAGTACCTCCCAAGGCTTTTTCTCATATTTCCTCTCTCAACACAAATTGTTAAGGCCACTGGACTTGTGACACAAACAGCATGGGCTGGAGCTGCTTATAACCTGATTCTTTATATGTTGGCAAGCCATGTTTTAGGAGCCTGCTGGTACCTTCTTTCAATTGAGCGACAAGAAGCATGCTGGAGAAGACTTTGTATGTTTGACAAATCTTGTAAAGATGGATTCTTCGACTGTCATAAGGTCGATGACCCTCAAAGGGACTCGTGGTTTAATATGAGCAACATTAAAAGCTCATGCAATCCAAGTGGTTCCTTTTATCAATTTGGTATATATGGTGATGCAATAACTTTCCATGTCACAACCTCACCATTTTTCAACAAGTACTTCTACTGTCTTTGGTGGGGCCTGAAAAATCTTAGTTCCTTAGGACAAAATCTTGCCACAAGCACTTTTGTTGGGGAAATAATTTTTGCCATTATTGTGGCAACTCTTGGACTGGTTCTGTTTGCATTGCTCATTGGTAATATGCAGAAATACCTCCAATCAACAACTGTTCGATTAGAAGAGTGGAGAATAAGGAGAACTGATACAGAACAATGGATGCATCACAGGCAACTACCTCCAGAGCTCAGACAATCTGTCCGCAGATATGATCAGTATAAGTGGGTAGCAACTCGAGGAGTCGATGAAGAAGTGCTGCTTAGAAGCCTTCCCTTGGATCTCCGAAGAGACATAAAACGTCACCTTTGCCTTGACCTCGTTCGAAGGGTTCCATTGTTTGATCAAATGGATGAAAGAATGCTAGATGCAATATGCGAGAGACTTAAACCTGCCTTGAGCACAGAAGGCACATATCTCGTGCGAGAAGGCGACCCAGTCAATGAAATGTTATTCATAATCAGAGGTCATCTCGACTCGTACACCACTAATGGTGGTAGAACCGGGTTTTTCAACTCTTGTCGTATTGGCCCCGGTGATTTCTGTGGTGAGGAGCTGCTGACTTGGGCTCTCGACCCTCGTCCAAGTGTTGTACTTCCTTCTTCCACTCGAACGGTCAAAGCTATCTCTGAGGTAGAAGCATTTGCTCTCATAGCAGAGGACTTGAAATTTGTATCCTCCCAGTTCAGAAGACTCCACAGCAAACAACTGAGACACAAGTTCCGATTCTACTCGCATCAATGGCGAACATGGGCTGCATGCTTTGTTCAAGCAGCATGGCGGAGATATAAGAGACGAAAAGAGCGAGCTGAGCTCAGAGCTAGAGAGAACTATCCGGCTACCAAAGTTGAGTCCCCACTTTCACCACCACCGACATCGAACTTGGATTCACGTTCAGGAAATGCTAGAAGGGGATTGAATAAGCGTTGTGTGTCGGATGCTGGGGTCGTAAGCTCGTTGCAGAAGCCAGAAGAGCCCGACTTCTCCATTGTCGAGGAATAA | 2103 | 43.65 | MAYGSSRSVRFQDDLESSALPTINGGGVTKIIYNIDGTQIPESSGKRTSASRKSGRSLRAKVLSRVFSEDYERVQRKILDPRGQVIRRWNKIFLVACLVSLFVDPLFFYLPVVRDEVCIDIGVGLEVVLTTIRSIADVFYTIQIFIKFRTAYVAPSSRVFGRGELVIDPFKIAIRYLRYGFWIDLIAAVPVPQVLIWIVIPNLSGSTMTNTKNFLRFFLIFQYLPRLFLIFPLSTQIVKATGLVTQTAWAGAAYNLILYMLASHVLGACWYLLSIERQEACWRRLCMFDKSCKDGFFDCHKVDDPQRDSWFNMSNIKSSCNPSGSFYQFGIYGDAITFHVTTSPFFNKYFYCLWWGLKNLSSLGQNLATSTFVGEIIFAIIVATLGLVLFALLIGNMQKYLQSTTVRLEEWRIRRTDTEQWMHHRQLPPELRQSVRRYDQYKWVATRGVDEEVLLRSLPLDLRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPALSTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVVLPSSTRTVKAISEVEAFALIAEDLKFVSSQFRRLHSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKRRKERAELRARENYPATKVESPLSPPPTSNLDSRSGNARRGLNKRCVSDAGVVSSLQKPEEPDFSIVEE | 700 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 37689519 | 37692845 | - | CrPI670011_02g024310.1 | Cre02g2431 | 491712 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g2431 | 700 | SUPERFAMILY | Voltage-gated potassium channels | 80 | 402 | - | - | |
Cre02g2431 | 700 | FunFam | Cyclic nucleotide-gated ion channel 1 | 407 | 471 | - | - | |
Cre02g2431 | 700 | SMART | cnmp_10 | 480 | 611 | IPR000595 | - | |
Cre02g2431 | 700 | FunFam | Cyclic nucleotide-gated ion channel 1 | 478 | 596 | - | - | |
Cre02g2431 | 700 | Pfam | Ion transport protein | 88 | 407 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cre02g2431 | 700 | CDD | CAP_ED | 480 | 611 | IPR000595 | - | |
Cre02g2431 | 700 | MobiDBLite | consensus disorder prediction | 654 | 668 | - | - | |
Cre02g2431 | 700 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 480 | 577 | IPR000595 | - | |
Cre02g2431 | 700 | Gene3D | Helix hairpin bin | 407 | 471 | - | - | |
Cre02g2431 | 700 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 55 | 645 | - | - | |
Cre02g2431 | 700 | Gene3D | - | 86 | 404 | - | - | |
Cre02g2431 | 700 | Gene3D | Jelly Rolls | 478 | 598 | IPR014710 | - | |
Cre02g2431 | 700 | PRINTS | EAG/ELK/ERG potassium channel family signature | 261 | 271 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cre02g2431 | 700 | PRINTS | EAG/ELK/ERG potassium channel family signature | 443 | 450 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cre02g2431 | 700 | PRINTS | EAG/ELK/ERG potassium channel family signature | 144 | 153 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cre02g2431 | 700 | PRINTS | EAG/ELK/ERG potassium channel family signature | 393 | 402 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cre02g2431 | 700 | PRINTS | EAG/ELK/ERG potassium channel family signature | 375 | 386 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cre02g2431 | 700 | PRINTS | EAG/ELK/ERG potassium channel family signature | 349 | 366 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cre02g2431 | 700 | Pfam | Cyclic nucleotide-binding domain | 503 | 563 | IPR000595 | - | |
Cre02g2431 | 700 | MobiDBLite | consensus disorder prediction | 641 | 672 | - | - | |
Cre02g2431 | 700 | SUPERFAMILY | cAMP-binding domain-like | 410 | 605 | IPR018490 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g2431 | Cre-Chr2:37689519 | Cre04g0995 | Cre-Chr4:28540023 | 3.70E-216 | dispersed | |
Cre02g2431 | Cre-Chr2:37689519 | Cre10g1579 | Cre-Chr10:29826647 | 9.40E-204 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g2431 | K05391 | - | csv:101210775 | 1365.13 |