Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2434 ATGCGCTTCAACCAAACTCCCTTTGTCAAGAAATCGTGTCGTCTTCTTCATCACTTCTCGCTTTGTTTCTCTAACCTTTACTTGTATGTTACTTGGTTGGAAGAAGCTGGATTCTCCTTCCAGGGCCATATTTTGGCTATGTCTGAATCTTCATTGTTTGGACGCTCCAGATTATTCCGATCAATGGTGATCGATGCACGACTGTATTCCACATTAGCGAGGGTCCGCAATTTAGCGGTATACATAGCCGACACAGGGTTGGTGGGGATGTGGGACTCAATATCGGTCCCTTTCGGATACGCAAATGGGTCACTTTCAGAGTGGTGGTCGATGGGTTCTGTTCTGTTCTGTTTTCAGCCTGATTCCAATTCTGAATATATCCGAACCTTTAGCGGTCTCTGTCCACCACAATTCCCTTTCTGTCATTCGGCGTTCTCAATCCACTGTTTTGATTATCTGGATAAAATGAAGCACCAAGTGGCAACCACCTTCATTTCTTTAATGATTTTTATCTTGATGCAACAAGTCATTTGTGCTGATACTTCTACCCCTGGCAACTGGACGTGTAAATGTTTTTCTCCATACCAAGAAAATCAGAGATTAACACTTGGGGTAAATTGTTCTACATCGTGTTCATGTTCACAAGATGTTGGGGGAATCGGACTGTGGACATGCATCTGTTCAACTGATGGCTTCCCAAAAGTTGTAGCCGAACACCGTGATTCTAACTGTTTTACGTCATGCAACTGCTCTTATGGACTGCTTCCGGAGTCACCATCTTCTAAAAGGCACATTTCAAGCAACGTGGTTGTGATTATTCTCTCACTATGTGTAATAATCATAACATTAGCCTTCTTCATCTTAGTGGTTTGCTATCTTTGTCAAAGGGGCAAGTACCGTGTTCGAACTCCAATATTTTCATTAGATAAGCAAATGAGCTACAACAGTTTGACCAACCTAATTAGTCACAAGAGTTCTTCAACACTGGATAGTAAGGTTATGATGGATTCCCCTGTGAATAACATCAAAGGATGCTTTTTCATGAATCAATGCTTGTTGAGGACTAAATCTTGGAGTATATGTGGGATCATCATCCAATTCTCATATTCAGAGTTGGAAAATGCAACAAATAAGTTTTCAAGCTCCCATCTTGTGGGACGTGGGGGGAGTAGCTTTGTTTATCGTGGTGAATTGAAGGACGGTAGAACAGTGGCTGTAAAGCGGCTCAATATTCAAGGAGGACCGGATGTGGACTACTTATTCTTAACAGAAATACAATTGTTATCAAGACTTCATCATTGCCACGTGGTTCCTCTACTTGGTTATTGCACAGAATCAAGGGGGAAACATACTGAAAGGCTTTTGGTATATGAATACATGCCAAAGGGTAATCTAAGAGACTGTTTGGATGAAGCTTTAGAGGAGAAAATGGATTGGGGTACTCGTGTTACAATTGCTTTGGGAGCTGCAAGAGGCTTGGAGTATCTTCATGAAGCAGCTGCTCCCAGAATTTTGCATAGAGATGTCAAGTCAACAAATATTCTTTTGGATAAAGATTGGAGAGCAAAAATAACAGACCTTGGTATGGCTACAAGGTTAAGAGGTGATGATCTTCCTAGCTGTTCCAGTTCTCCTGCTAGAATGCAGGGGACTTTTGGGTACTTTGCACCGGAGTATGCAATTGTTGGAAGAGCCTCTTTGAAGTCTGATGTCTTTAGTTTTGGAGTTGTTCTTCTTGAGCTTATAACGGGTCAGCATCCCATCCATAAATCAGCAAGCAAAGGAGAGGAAAGCCTTGCAATATGG 1806 41.92 MRFNQTPFVKKSCRLLHHFSLCFSNLYLYVTWLEEAGFSFQGHILAMSESSLFGRSRLFRSMVIDARLYSTLARVRNLAVYIADTGLVGMWDSISVPFGYANGSLSEWWSMGSVLFCFQPDSNSEYIRTFSGLCPPQFPFCHSAFSIHCFDYLDKMKHQVATTFISLMIFILMQQVICADTSTPGNWTCKCFSPYQENQRLTLGVNCSTSCSCSQDVGGIGLWTCICSTDGFPKVVAEHRDSNCFTSCNCSYGLLPESPSSKRHISSNVVVIILSLCVIIITLAFFILVVCYLCQRGKYRVRTPIFSLDKQMSYNSLTNLISHKSSSTLDSKVMMDSPVNNIKGCFFMNQCLLRTKSWSICGIIIQFSYSELENATNKFSSSHLVGRGGSSFVYRGELKDGRTVAVKRLNIQGGPDVDYLFLTEIQLLSRLHHCHVVPLLGYCTESRGKHTERLLVYEYMPKGNLRDCLDEALEEKMDWGTRVTIALGAARGLEYLHEAAAPRILHRDVKSTNILLDKDWRAKITDLGMATRLRGDDLPSCSSSPARMQGTFGYFAPEYAIVGRASLKSDVFSFGVVLLELITGQHPIHKSASKGEESLAIW 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37710187 37715894 - CrPI670011_02g024340.1 Cre02g2434 491715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2434 602 PANTHER OS01G0750732 PROTEIN 241 602 IPR050885 -
Cre02g2434 602 FunFam Os07g0541700 protein 462 551 - -
Cre02g2434 602 Gene3D Phosphorylase Kinase; domain 1 354 459 - -
Cre02g2434 602 ProSitePatterns Protein kinases ATP-binding region signature. 385 407 IPR017441 GO:0005524(InterPro)
Cre02g2434 602 SUPERFAMILY Protein kinase-like (PK-like) 359 591 IPR011009 -
Cre02g2434 602 FunFam receptor-like serine/threonine-protein kinase NCRK 354 459 - -
Cre02g2434 602 Pfam Protein kinase domain 381 595 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g2434 602 Gene3D Transferase(Phosphotransferase) domain 1 460 602 - -
Cre02g2434 602 ProSiteProfiles Protein kinase domain profile. 379 602 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g2434 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre02g2434 602 SMART serkin_6 379 601 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2434 Cre-Chr2:37710187 Cre03g1825 Cre-Chr3:35163419 1.30E-57 dispersed
Cre02g2434 Cre-Chr2:37710187 Cre11g1014 Cre-Chr11:7454804 7.90E-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63909 PF00069 Pkinase 5.90E-39 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2434 - - - 0.0