Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g2508 | ATGACTACATTAGCCAGTACTTCTGAAATTGTTGAATCAACAGAAGAATTTGATTCTGAGAAAGCTGGGACGAGTTACGCGCTAGATGTAGGAAAAAGGTTTTCTATAGAGGATGACATTAATCGTCTGTTTCAAGCAATTGATATCAGAACCTTACGTAAGAGGTCAAGTCAGCAACGTGAAGTTGATAAAGATGCTCTGCGGAAGAGTGCGATGAAAAGACCAGTTAGAGTAGGTTCATCTCACATGGCAGGGATTGGAATTTCTGAACCTGCAAGTTTAAAGCAGGCGTTGAGGGGCTTATGCATATCCCAGGCTGCAGAAATGGCTGCTTCAAAGAGGTTAACAAGGTCTGTAGGTTCACCCAGAATCTCTGAAGCAGGAACTATCAAAAGATTGTATAGGGCGGTGGTGGTTGAGGCCAGTGGATCTGGTGTGCCTGTAAATGAAAGCAAAGCAAATTTGGTAGAAATTTCCATCGTTTCAGAAAGAATTATGTCAACTTTTCAAAATAAGATGCCCGAATTGTCGCATAAAACTGAGGCTGATATACCAAACCAAGGAGCTGAGTCTTCTTCTTCCAAGGATACTGGGGTATCAGAAAAGGCGGGTGTGGATAGATTGATGTCAAAGGATCTTGTTGTTAATACGGCTACTGAGGTGACAAGTATAAAGCCACCTGGTGAGGTGGGAAAACTTAAATCTCCTTCCCTTACTCCTTCTGGTGAGAAGGATCTGGCTGTGAACGGTATGGCTATTTCCTCAACTGAAGATTTGACAAAAAATTCAGTGCCAGAGAAGGAGAGAGGTACAATGGATTGTTTATCTTCTCTATCAAGCTCTGGATCTGTTGTCAGGCCGAACAAATCAGCTTTCAATAATACACGCTTCATCAAACCTATTTTCAGGACCAAGAATTTTGTCAAGAAGAAAGCAAAACTTGAACCAAATTCCTCCCCTAGTATGTCCGATGTCTGCACAGTAACGTTTGACACTGATTTGGCTACCATAGCAGAAAAGTCTGAGAACCAGATGCCAGATAACGCACAGCTTCATGAGATTAAAGAAGAAGATAAATGTTCTTCTGTCTCTAGTAACATAACTTTAGGTGTTGAAGTAAGTGGAAATGTAGGAAACACAGAATCTAGTAGACCTGGTACGTCTCTCAGCTGCTGTAACAGGAACAGACCAACTATTATGCTATCTGATGAGAGATCCAGATCAAGAGAGAAAGGGATGTTCTCTCAGAGCTCTAAAAGTAGTGTTGGTGAATGTAGCAGTAGCCCAAGCATCAGTGGGGAAAGCATTCTCAGTGGATCAAGTCGCAGTGGAGTTCGGCCTCACATGTCAAAAGATTTGAAATGGGAGGCTATCCACCACCTCAAGGATCAACATAAATGCCTAGGTCTGAGAAACTTCAAGCTGCTAAAGAGACTTGGTCTCGGGGACATTGGGACTGTCTATCTCTCTGAGCTTTGCGATTCAAGCTGTCTTTTTGCTATGAAAGTGATGGACAAGGAGTTCTTGGCAAGTAGGAAAAAAATAATTCGGGCACAAACTGAGAGAGAGATACTACAAATGCTTGACCATCCATTTCTCCCTACATTATATGCCCATTTCGAGACGGATAAGCACTCATGCCTGGTCATGGACTACTGTCCCGGTGGAGATCTCCACGTACTGCGACAGAAGCAACCATGCAAGAGTTTCTCTGAGCGTGCAGTCAGGTTCTATGTCGCTGAAGTTCTTCTTGCACTGGAGTACTTGCACATGCTAGGAGTTGTTTATCGCGACCTGAAACCCGAAAACGTCCTGGTCCGAGAAGATGGGCACATCATGCTCACGGATTTTGATTTGTCCCTTAGATGTGCTGTTAACCCAACGCTGCTTCAATCATCATCTCCAGTTGTGGAACCCACTAAGAGGACGTTGAATCCCTGTGATGAATCTAGTTGCATTGACCCTTTCTGCCTCCATCCATCCTGGCAGGTCTCATGCTTCACTCCCAAAGTTCTATCTTCTCCATACAAATCCCGGAGAACGAAAACAGATCATCAGGCTAGTCTATTACCACAGCTTATAGTCGAACCAACTGGTGCACGGTCCAATTCGTTTGTAGGAACCCATGAATACCTCGCTCCTGAGATTGTCAAGGGCGACGGCCATGGGAGCGCTGTTGATTGGTGGACTTATGGGATTTTCCTGTTTGAGCTACTATATGGTAAGACTCCCTTCAAAGGTTCAGGAAATGAGGACACATTAGCGAACATAGTATCCCAAACTCTCAAGTTCCCCGATTGCCCCATAGTTAGTTTTCATGCAAGAGACCTGATCAGATGTCTGCTGACAAAGGAGCCCGAGAACCGATTAGGCTCGACAAAAGGAGCTATCGAGATTAAGCAGCATCCGTTTTTCGAAGGCCTCAATTGGGCTCTAATACGTTGTGCAACACCACCCGAGCTTCCCAAGCTTTTCGACGGTGGAACTAGTGCAATGCCAGTGGATTCTGGGGAGAATACAAAGCGTAGAGATCTCGAAAATATGGAAGCGGATGCAGCAATGTTTGACCTGTTTTAG | 2577 | 44.39 | MTTLASTSEIVESTEEFDSEKAGTSYALDVGKRFSIEDDINRLFQAIDIRTLRKRSSQQREVDKDALRKSAMKRPVRVGSSHMAGIGISEPASLKQALRGLCISQAAEMAASKRLTRSVGSPRISEAGTIKRLYRAVVVEASGSGVPVNESKANLVEISIVSERIMSTFQNKMPELSHKTEADIPNQGAESSSSKDTGVSEKAGVDRLMSKDLVVNTATEVTSIKPPGEVGKLKSPSLTPSGEKDLAVNGMAISSTEDLTKNSVPEKERGTMDCLSSLSSSGSVVRPNKSAFNNTRFIKPIFRTKNFVKKKAKLEPNSSPSMSDVCTVTFDTDLATIAEKSENQMPDNAQLHEIKEEDKCSSVSSNITLGVEVSGNVGNTESSRPGTSLSCCNRNRPTIMLSDERSRSREKGMFSQSSKSSVGECSSSPSISGESILSGSSRSGVRPHMSKDLKWEAIHHLKDQHKCLGLRNFKLLKRLGLGDIGTVYLSELCDSSCLFAMKVMDKEFLASRKKIIRAQTEREILQMLDHPFLPTLYAHFETDKHSCLVMDYCPGGDLHVLRQKQPCKSFSERAVRFYVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLTDFDLSLRCAVNPTLLQSSSPVVEPTKRTLNPCDESSCIDPFCLHPSWQVSCFTPKVLSSPYKSRRTKTDHQASLLPQLIVEPTGARSNSFVGTHEYLAPEIVKGDGHGSAVDWWTYGIFLFELLYGKTPFKGSGNEDTLANIVSQTLKFPDCPIVSFHARDLIRCLLTKEPENRLGSTKGAIEIKQHPFFEGLNWALIRCATPPELPKLFDGGTSAMPVDSGENTKRRDLENMEADAAMFDLF | 858 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 38353164 | 38356202 | - | CrPI670011_02g025080.1 | Cre02g2508 | 491789 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g2508 | 858 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 594 | 606 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre02g2508 | 858 | MobiDBLite | consensus disorder prediction | 413 | 445 | - | - | |
Cre02g2508 | 858 | Pfam | Protein kinase domain | 474 | 623 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre02g2508 | 858 | Pfam | Protein kinase domain | 702 | 805 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre02g2508 | 858 | ProSiteProfiles | Protein kinase domain profile. | 473 | 805 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre02g2508 | 858 | Gene3D | Transferase(Phosphotransferase) domain 1 | 553 | 621 | - | - | |
Cre02g2508 | 858 | SUPERFAMILY | Protein kinase-like (PK-like) | 448 | 824 | IPR011009 | - | |
Cre02g2508 | 858 | CDD | STKc_phototropin_like | 473 | 828 | - | - | |
Cre02g2508 | 858 | MobiDBLite | consensus disorder prediction | 404 | 446 | - | - | |
Cre02g2508 | 858 | PANTHER | FLIPPASE KINASE 1-RELATED | 342 | 829 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cre02g2508 | 858 | SMART | serkin_6 | 473 | 805 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre02g2508 | 858 | Gene3D | Transferase(Phosphotransferase) domain 1 | 700 | 823 | - | - | |
Cre02g2508 | 858 | FunFam | serine/threonine-protein kinase D6PK-like | 557 | 624 | - | - | |
Cre02g2508 | 858 | FunFam | serine/threonine-protein kinase D6PK-like | 700 | 823 | - | - | |
Cre02g2508 | 858 | Gene3D | Phosphorylase Kinase; domain 1 | 471 | 552 | - | - | |
Cre02g2508 | 858 | MobiDBLite | consensus disorder prediction | 179 | 203 | - | - | |
Cre02g2508 | 858 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cre02g2508 | 858 | MobiDBLite | consensus disorder prediction | 184 | 199 | - | - | |
Cre02g2508 | 858 | FunFam | Serine/threonine-protein kinase D6PK-like | 471 | 556 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g2374 | Cre-Chr2:37143370 | Cre02g2508 | Cre-Chr2:38353164 | 5.90E-98 | dispersed | |
Cre02g2508 | Cre-Chr2:38353164 | Cre05g0071 | Cre-Chr5:906286 | 1.80E-148 | dispersed | |
Cre02g2508 | Cre-Chr2:38353164 | Cre02g2510 | Cre-Chr2:38371670 | 1.30E-114 | proximal | |
Cre02g2635 | Cre-Chr2:39631904 | Cre02g2508 | Cre-Chr2:38353164 | 4.60E-65 | transposed | |
Cre03g1087 | Cre-Chr3:10069486 | Cre02g2508 | Cre-Chr2:38353164 | 1.40E-102 | transposed | |
Cre07g1427 | Cre-Chr7:29299355 | Cre02g2508 | Cre-Chr2:38353164 | 2.80E-90 | transposed | |
Cre02g2508 | Cre-Chr2:38353164 | Cre04g1079 | Cre-Chr4:29504222 | 8.00E-197 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63912 | PF00069 | Pkinase | 1.20E-36 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g2508 | - | - | - | 0.0 |