Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g2551 | ATGGCGACGTACTTTCACGGTGGTTCAGAAATCCAAGCGAATTCTGACGGAATTCATACTCTTTACCTTATGAACCCAAATTACGTACCTTACTCTGACACCCACTCTCAAACGCCTCCCAATATGCTCTTTCTCAACTCTTCTTCAACTCACGCGCTTAACCCTTCAACTCTTCCTCACGCGCCGCCTTCCAACAACCACTTCGTCGGAATTCCCCTCCCGACCACCGACAATCCTCGTCCATCCTACCACGAAATCTCAACCCTCCATCCGATGCCACCTCACCGCCTCCACTACAATCTATGGGCTCCTATGGACCAACAACCCCATCACGGAATTTCCGGCGATTCCGCCGATTTGACCTTCCGCCGCCCCACCACACAACAAGGTTTATCCTTAAGCCTCTCCTCCCAACAATCGCTTTACCGGACACTCTCGGCCGAGCAGGAGATTCAAGGCGGCGGCGGCGGTGCTCCAAGTGGGGAGGAAATTCGGGTGTCGGGAAATTCACCGACGTCGGTGTCGGTGGTGTCGAGTGGAATAACGGGCGTTCAAAGCGTGATATTGGGGTCTAAGTACTTGAAAGCGGCTCAAGAACTTTTGGATGAAGTGGTTCATGTTGGCAAAGGAAATTTTAAATCCGACAAAGGGGATGGGACAAAGGACAAGATGAAGATGAAGAAAGAATCAACGGCTACGATTGGTGGAGACCCTTCCGCCTCCGTCGGCGGTGGTGAAAGTACTTCCAAGCCTGTTGCTGAGCTCAGCACTGCTCAAAGACAGGACCTTCAGATGAAAAAAGCTAAGCTCATTGGCATGCTTGATGAGGTGGAGCAGAAGTACAGACAATATCATCAACAAATGCAAGGAGTGGTGAGTTGTTTTGAGCAGGCAGCAGGTTTGGGGTCAGCCAAATCTTACGCTTCACTCGCACTTGAAACAATTTCAAAGCAATTCCGGTGCTTAAAAGATGCAATTTGTGCACAAATAAAAGCGACAGGGAAAAGCTTAGGAGAAGAAGAAAATTGGTTGGGTTCAAAAATTGAAGGGTCTTCAAGATTGAGATACGTTGATCATCATTTAAGGCAGCAAAGAGCTTTGCAACAATTGGGAATGATTCAACACAATACTTGGAGACCACAAAGAGGTTTGCCTGAACGAGCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAGCATTTCCTTCATCCCTATCCCAAGGATTCAGACAAGATTATTCTCGCCAAACAAACCGGACTCACAAGAAGCCAAGTATCGAATTGGTTTATAAATGCAAGAGTTCGTCTATGGAAGCCAATGGTTGAAGAAATGTACTTGGAGGAAATCAAAGAGCAAGAACAAAACGGGGATTCCCAAGACATGATTAGAGGAGGAGATCATCATCATCATCATCATCAAAGCAATAACAACAATAATAATAGTAATAATGATCCACAATATTCCAAGACAGAAAATTTGATGAACAACAACAACAACAACCCTTCCCATTCTTCAATCTCATCATCCTCAATGTTAGGAATAGGATCAACGACGGGCGGCTTCAACCTCGTACGACCGTCCTCCGACAATAACATTCTCTCAAGTCCCAAAAAACCAAGGACCACCACCAGTAGCAGTACAGCCACAATCAACAACAACAACCTGCCCGAAACCCCATCCTCAAAATCCATGCTTTTAAGAGACAATATTGTTCATGATCATCATAGGGGTAGTTTTGGTAATTCCAATACATACCCGGTTGGTGAAATTGGCTCAACCTTCAATTCTGAGCTTTTAACACCAAGATTTCATGCAAATGGAGTCTCTCTCACTCTTGCCCTTCCCCATAATAGTAATTCAGATCATCTCTCTCTTTCAGCCAACCAACCAAATTACCATCACCTATCCTCCAACCCAAATCTTCACTTGGGCAGATCAAGGCTTGATATCACCAATAATCATCATCCCGGACCACCCAATTTCTCCGACGTCAATCCCGCTGCCCCCCCACCGCCTCATTCCGCTTACGACCACGTTGAAATGCAAACCACCAAAAGGTTCGCCGCCCAATTGTTGCCGGATTTTGTTGCCTGA | 2091 | 46.25 | MATYFHGGSEIQANSDGIHTLYLMNPNYVPYSDTHSQTPPNMLFLNSSSTHALNPSTLPHAPPSNNHFVGIPLPTTDNPRPSYHEISTLHPMPPHRLHYNLWAPMDQQPHHGISGDSADLTFRRPTTQQGLSLSLSSQQSLYRTLSAEQEIQGGGGGAPSGEEIRVSGNSPTSVSVVSSGITGVQSVILGSKYLKAAQELLDEVVHVGKGNFKSDKGDGTKDKMKMKKESTATIGGDPSASVGGGESTSKPVAELSTAQRQDLQMKKAKLIGMLDEVEQKYRQYHQQMQGVVSCFEQAAGLGSAKSYASLALETISKQFRCLKDAICAQIKATGKSLGEEENWLGSKIEGSSRLRYVDHHLRQQRALQQLGMIQHNTWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKIILAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKEQEQNGDSQDMIRGGDHHHHHHQSNNNNNNSNNDPQYSKTENLMNNNNNNPSHSSISSSSMLGIGSTTGGFNLVRPSSDNNILSSPKKPRTTTSSSTATINNNNLPETPSSKSMLLRDNIVHDHHRGSFGNSNTYPVGEIGSTFNSELLTPRFHANGVSLTLALPHNSNSDHLSLSANQPNYHHLSSNPNLHLGRSRLDITNNHHPGPPNFSDVNPAAPPPPHSAYDHVEMQTTKRFAAQLLPDFVA | 696 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 38742831 | 38746291 | + | CrPI670011_02g025510.1 | Cre02g2551 | 491832 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g2551 | 696 | Gene3D | - | 381 | 459 | - | - | |
Cre02g2551 | 696 | FunFam | BEL1-like homeodomain protein 9 | 381 | 443 | - | - | |
Cre02g2551 | 696 | Pfam | Associated with HOX | 187 | 326 | IPR006563 | - | |
Cre02g2551 | 696 | MobiDBLite | consensus disorder prediction | 450 | 472 | - | - | |
Cre02g2551 | 696 | MobiDBLite | consensus disorder prediction | 209 | 230 | - | - | |
Cre02g2551 | 696 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 138 | 492 | IPR050224 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) | |
Cre02g2551 | 696 | MobiDBLite | consensus disorder prediction | 209 | 260 | - | - | |
Cre02g2551 | 696 | SUPERFAMILY | Homeodomain-like | 379 | 444 | IPR009057 | - | |
Cre02g2551 | 696 | ProSiteProfiles | 'Homeobox' domain profile. | 375 | 438 | IPR001356 | GO:0003677(InterPro) | |
Cre02g2551 | 696 | MobiDBLite | consensus disorder prediction | 234 | 260 | - | - | |
Cre02g2551 | 696 | Coils | Coil | 260 | 287 | - | - | |
Cre02g2551 | 696 | Pfam | Homeobox KN domain | 395 | 434 | IPR008422 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Cre02g2551 | 696 | MobiDBLite | consensus disorder prediction | 149 | 172 | - | - | |
Cre02g2551 | 696 | MobiDBLite | consensus disorder prediction | 450 | 562 | - | - | |
Cre02g2551 | 696 | SMART | prehox3 | 182 | 328 | IPR006563 | - | |
Cre02g2551 | 696 | SMART | HOX_1 | 378 | 442 | IPR001356 | GO:0003677(InterPro) | |
Cre02g2551 | 696 | CDD | homeodomain | 378 | 439 | IPR001356 | GO:0003677(InterPro) | |
Cre02g2551 | 696 | MobiDBLite | consensus disorder prediction | 474 | 562 | - | - | |
Cre02g2551 | 696 | MobiDBLite | consensus disorder prediction | 649 | 668 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g2551 | Cre-Chr2:38742831 | Cre11g0897 | Cre-Chr11:6157965 | 1.70E-80 | dispersed | |
Cre02g1612 | Cre-Chr2:28859874 | Cre02g2551 | Cre-Chr2:38742831 | 9.80E-70 | transposed | |
Cre04g1254 | Cre-Chr4:31285032 | Cre02g2551 | Cre-Chr2:38742831 | 7.90E-70 | transposed | |
Cre10g1946 | Cre-Chr10:34169119 | Cre02g2551 | Cre-Chr2:38742831 | 1.10E-138 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
53256 | PF07526 | POX | 2.10E-46 | No_clan | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g2551 | - | - | - | 0.0 |