Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2568 ATGGCGGCTCGGGCTGTTGTTCCTCAGCGACAACTTAGAATCAGAGATGAAGGTAAGCCGAAGGTCGTGGCGGTGGAAGGAAGAACAAGACGAATTCTTAAGGATATAGGAAATCTAGTGCCTGATCGAGCCATAGAAGGGAAACCCGGAACTCAACCAGCAGAGAAGAATAAGAAGGCAATCACCCAAAAGGTGGATGGAGGAGTTGGGAAGGGAGTCAATGCAACGAAGGCTGGAGTAACTGAGAAACCGAAACTGAAGACTGTAATCCGCTCCAGCGACGAGAGATATATAAGCAACGTCAAAGATACTAAATCAAAGGACAAGAATAAGAGATCTCTGAGTTCAACCCTTAGTGCCAGAAGCAAGGCTGCTTGTGGACTCACCAATAAACCACTGGATTCTTCAGTAGCTAATATTGATGAAGCAGATGCCAACAATGAATTAGCCGTAGTAGAATACATTGATGACATGTATAAGTTTTACAAGCTTGCAGAAGATGAGAGTAGAGTATCAGATTACATGGGAGCACAGCCAGATTTGAATGCTAAGATGAGATCCATTCTCATAGATTGGTTGATAGAAGTTCATCGAAAGTTTGAACTGATGCCGGAAACCCTTTACCTCACTGTAAACATCGTCGACCGATTCCTTTCCTTAAAGACTGTACCTAGGAAGGAACTTCAATTGCTTGGTATCAGCTCTATGCTGATAGCATGCAAATATGAAGAGATTTGGGCCCCAGAGGTCAATGACTTTGTAAGTATATCTGCAAATACTTATCAAAGAGAACAAATTTTGGTGATGGAGAAAGTAATCTTGGGTAGGTTGGAATGGCTTTTAACAGTTCCTACCCCTTATGTTTTTCTTGTTCGATATGTCAAGGCTTCTGAGCCATCTGATGATGAGATGGAGAATATGGTATTTTTTCTAGCTGAGCTTGGTCTGATGAACTATCCAATAGCAATATCATACAGCCCTTCAATGATTGCTTCAGCGGCTGTTTATGCTGCAAGATGCACACTTGAAAAGAGCCCAATCTGGACAGCAACTTTGCATCACCATACAGGCTATGTTGAAGAAGAGTTGAAGGAATGTGCAAAACTCCTTGTGAACTTACACCGTGGAGCTGTAGATTCAAAACTCAAGGCTGTATACAGAAAATATTCAAGTCCCGATCGCCGTGCCGTTTCTCTTCTTCCTCCAGCTAAAAGCTTAACTCCAGATTGTAGTCCAGAAGTATGA 1245 42.49 MAARAVVPQRQLRIRDEGKPKVVAVEGRTRRILKDIGNLVPDRAIEGKPGTQPAEKNKKAITQKVDGGVGKGVNATKAGVTEKPKLKTVIRSSDERYISNVKDTKSKDKNKRSLSSTLSARSKAACGLTNKPLDSSVANIDEADANNELAVVEYIDDMYKFYKLAEDESRVSDYMGAQPDLNAKMRSILIDWLIEVHRKFELMPETLYLTVNIVDRFLSLKTVPRKELQLLGISSMLIACKYEEIWAPEVNDFVSISANTYQREQILVMEKVILGRLEWLLTVPTPYVFLVRYVKASEPSDDEMENMVFFLAELGLMNYPIAISYSPSMIASAAVYAARCTLEKSPIWTATLHHHTGYVEEELKECAKLLVNLHRGAVDSKLKAVYRKYSSPDRRAVSLLPPAKSLTPDCSPEV 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38953356 38955646 + CrPI670011_02g025680.1 Cre02g2568 491849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2568 414 FunFam G2/mitotic-specific cyclin-1 279 398 - -
Cre02g2568 414 SMART cyclin_7 191 275 IPR013763 -
Cre02g2568 414 SMART cyclin_7 288 372 IPR013763 -
Cre02g2568 414 Pfam Cyclin, C-terminal domain 284 402 IPR004367 -
Cre02g2568 414 MobiDBLite consensus disorder prediction 43 62 - -
Cre02g2568 414 Pfam Cyclin, N-terminal domain 157 281 IPR006671 -
Cre02g2568 414 Gene3D - 171 282 - -
Cre02g2568 414 Gene3D - 157 399 - -
Cre02g2568 414 CDD CYCLIN_AtCycB-like_rpt2 284 402 - -
Cre02g2568 414 PIRSF Cyclin_A_B_D_E 2 413 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Cre02g2568 414 SMART Cyclin_C_2 284 403 IPR004367 -
Cre02g2568 414 SUPERFAMILY Cyclin-like 146 279 IPR036915 -
Cre02g2568 414 CDD CYCLIN_AtCycB-like_rpt1 135 279 - -
Cre02g2568 414 ProSitePatterns Cyclins signature. 186 217 IPR048258 -
Cre02g2568 414 FunFam G2/mitotic-specific cyclin 170 278 - -
Cre02g2568 414 SUPERFAMILY Cyclin-like 285 406 IPR036915 -
Cre02g2568 414 PANTHER CYCLINS 136 391 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0205 Cre-Chr1:1430262 Cre02g2568 Cre-Chr2:38953356 3.50E-62 dispersed
Cre02g2568 Cre-Chr2:38953356 Cre04g0641 Cre-Chr4:24012467 1.90E-111 dispersed
Cre02g2568 Cre-Chr2:38953356 Cre05g1879 Cre-Chr5:30930794 2.10E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2568 K21777 - csv:101222873 736.487