Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2575 ATGGAACAAACAAAGTACAGAGCCGATCTTCTTTCATCCCTCTTCCTTGTCCTCATCCTTTTACTCTCCCTTTCCGGCCGATCCGCCGTTCATGCCTACAAGAACTACACCGTCGGAGATTCCCTCGGTTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTACCAAGAATGGACCGCTGGCAAGACCTTCGGCCTCGGCGATTTTCTAATTTTTAACACGGACAACAATCACTCGGTTGTGCAAACATACAATTTCACCACATACAAGCTTTGTGACTACGACGACGCGTCGGAAAACGACACGACGGAATGGTCTGCCGCCGACCCGTCGGCGACCACTCCCTACGCCGTGACCGTGGCCGTCCCATTGGTGAAAGAAGGGACCAACTATTTCTTCTCCGGCAACTACGACGGAGAGCAATGCCAAAATGGCCAACAATTCAAAATAAACGTCACCCATGGACAAGGCCTCCCAAAAAGCATGAGAGATTCTTCCGACGAAGCTCCGGCTCCAGTAGTTCCCGACACCGGTGACCAAACCGAAGCTGCACCCGACACCATTGTCCCTTCCAGCTTCGACAATCCTCGAAACGACGTCGCTGATAGCGACAAGGAAGCTTCAGGCTCCGACTCGTTATCGCTTTGCATCAAGTTTAATGAGCTCTTCTTCTTGTTAGCTGGTATTGTTTCTGCCTGCTTTTTTCTTTGTACTGAGTGA 720 50.69 MEQTKYRADLLSSLFLVLILLLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQEWTAGKTFGLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDASENDTTEWSAADPSATTPYAVTVAVPLVKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQTEAAPDTIVPSSFDNPRNDVADSDKEASGSDSLSLCIKFNELFFLLAGIVSACFFLCTE 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38993189 38997259 + CrPI670011_02g025750.1 Cre02g2575 491856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2575 239 Gene3D - 33 157 IPR008972 -
Cre02g2575 239 FunFam Early nodulin-like protein 18 33 155 - -
Cre02g2575 239 Pfam Plastocyanin-like domain 46 146 IPR003245 GO:0009055(InterPro)
Cre02g2575 239 SUPERFAMILY Cupredoxins 34 152 IPR008972 -
Cre02g2575 239 ProSiteProfiles Phytocyanin domain profile. 34 154 IPR003245 GO:0009055(InterPro)
Cre02g2575 239 PANTHER BLUE COPPER PROTEIN 21 166 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cre02g2575 239 MobiDBLite consensus disorder prediction 156 210 - -
Cre02g2575 239 CDD Phytocyanin 34 152 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2575 Cre-Chr2:38993189 Cre06g0805 Cre-Chr6:1404878 3.50E-33 dispersed
Cre02g2575 Cre-Chr2:38993189 Cre08g1069 Cre-Chr8:23807903 7.50E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2575 - - - 0.0