Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre02g2575 | ATGGAACAAACAAAGTACAGAGCCGATCTTCTTTCATCCCTCTTCCTTGTCCTCATCCTTTTACTCTCCCTTTCCGGCCGATCCGCCGTTCATGCCTACAAGAACTACACCGTCGGAGATTCCCTCGGTTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTACCAAGAATGGACCGCTGGCAAGACCTTCGGCCTCGGCGATTTTCTAATTTTTAACACGGACAACAATCACTCGGTTGTGCAAACATACAATTTCACCACATACAAGCTTTGTGACTACGACGACGCGTCGGAAAACGACACGACGGAATGGTCTGCCGCCGACCCGTCGGCGACCACTCCCTACGCCGTGACCGTGGCCGTCCCATTGGTGAAAGAAGGGACCAACTATTTCTTCTCCGGCAACTACGACGGAGAGCAATGCCAAAATGGCCAACAATTCAAAATAAACGTCACCCATGGACAAGGCCTCCCAAAAAGCATGAGAGATTCTTCCGACGAAGCTCCGGCTCCAGTAGTTCCCGACACCGGTGACCAAACCGAAGCTGCACCCGACACCATTGTCCCTTCCAGCTTCGACAATCCTCGAAACGACGTCGCTGATAGCGACAAGGAAGCTTCAGGCTCCGACTCGTTATCGCTTTGCATCAAGTTTAATGAGCTCTTCTTCTTGTTAGCTGGTATTGTTTCTGCCTGCTTTTTTCTTTGTACTGAGTGA | 720 | 50.69 | MEQTKYRADLLSSLFLVLILLLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQEWTAGKTFGLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDASENDTTEWSAADPSATTPYAVTVAVPLVKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQTEAAPDTIVPSSFDNPRNDVADSDKEASGSDSLSLCIKFNELFFLLAGIVSACFFLCTE | 239 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 38993189 | 38997259 | + | CrPI670011_02g025750.1 | Cre02g2575 | 491856 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre02g2575 | 239 | Gene3D | - | 33 | 157 | IPR008972 | - | |
Cre02g2575 | 239 | FunFam | Early nodulin-like protein 18 | 33 | 155 | - | - | |
Cre02g2575 | 239 | Pfam | Plastocyanin-like domain | 46 | 146 | IPR003245 | GO:0009055(InterPro) | |
Cre02g2575 | 239 | SUPERFAMILY | Cupredoxins | 34 | 152 | IPR008972 | - | |
Cre02g2575 | 239 | ProSiteProfiles | Phytocyanin domain profile. | 34 | 154 | IPR003245 | GO:0009055(InterPro) | |
Cre02g2575 | 239 | PANTHER | BLUE COPPER PROTEIN | 21 | 166 | IPR039391 | GO:0009055(InterPro)|GO:0046658(PANTHER) | |
Cre02g2575 | 239 | MobiDBLite | consensus disorder prediction | 156 | 210 | - | - | |
Cre02g2575 | 239 | CDD | Phytocyanin | 34 | 152 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g2575 | Cre-Chr2:38993189 | Cre06g0805 | Cre-Chr6:1404878 | 3.50E-33 | dispersed | |
Cre02g2575 | Cre-Chr2:38993189 | Cre08g1069 | Cre-Chr8:23807903 | 7.50E-12 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre02g2575 | - | - | - | 0.0 |