Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2627 ATGGAGAGTTTGGAGGTGAATTTAGAGGAAACAAGAGAATATTACAAGACTGGAACAACAAAGGAAGCATCTTGGAGAGTTTCACAGCTTCAAGCCTTACGCCAATTTCTGGACCAAAATCGTCAACAAATTTACAATGCCCTTTCTCAAGACTTGGGAAAGCACCATGTTGAAGCTTTTAGAGATGAGATTGGTAATCTGGAAATGTCCCTCAATTTCGCATTGGAAAATTTGAAACATTGGATGTCTCCCAAAAAGGCAAAATTGCCAGCAATAGCATTACTGAGTTCAGCAGAAGTGGTTGCCCAGCCTCTGGGCGTTGTTCTTATAATCTCATCTTGGAACTTTCCGTTTGGGTTGTCGTTGGAGCCTTTAATAGGAGCATTAGCAGCCGGAAATTGCGTGTTTCTGAAGACGTCGGAGTATTCTCCGGCAAGTTCAGCTTTTCTGGCCAAAGCCATCGGAAATTATGTTGACAACAAAGCCGTTAGAGTCGTTGAAGGAGGGCCGGCGACCGGCGAGCGCCTGCTGCAGCAGCGCTGGGAGAAGATTTTCTTTACAGGAAGTGAACGAGTGGGGCGGATCGTTATGGCGGCCGCCGTCAAACACTTAACGCCGGTGACATTGGAACTCGGTGGGAAGTGCCCCGCCATTGTTGACTCCCTATCATTTTCATGGGATATTGAGTCTACTGCCAAACGGATCGTGATCGGAAAATTTGGAACCTGCGCCGGACAAGCTTGCATAGCAATCGATTATGTTCTTGTTGAACACAAATTTATATCCACCTTGGTCGAATTGCTGAAGAAGTTCATCAAGGAATTCTTCGATAAAAGTCCGAACCAAGCAAAAAGCATCGCGAGGATCGTAAACAAACAAAATTTCTTGAGGTTGAAGAATCTGGTGGATGAACCTGCTGTCCAAGCTGCAATCATCTATGGAGGATCAATGGACGAGGACAAATTGTTTGTGGAGCCGACTATTCTGTTGAATCCACCAAACGATGCAGGAATTATGAGAGATGAAATCTTTGGGCCAATCCTTCCCATAATTGGACTGGACAAGATTGAAGACAGTATAGATTTCGTCAATTCAAGGCCTAAGCCTCTTGCCATTTATGCCTTCACAAAAGACAAAGCTTTCCAAAGGAGACTCGTCTCAGAAACTTCATCCGGCAGCTTGACATTTAATGATGCAATTATTCAGTATGCAGTGGATACACTCCCGTTTGGAGGGGTTGGTGAAAGTGGGATTGGCCGGTACCATGGAAAATTCTCATTCGACACATTTAGTCATGAAAAGGCAATTCTGAAAAGGAGCTTCTTGGTGGACTTCTGGTTCAGATATCCGCCCTGGAACAATCACAAGCTTCAGCTGCTTAAACACGCTTACAATCTTAACTATTTTCAGTTTGTTCTTATTGTTTTGGGTCTTAAAAAGTCTTAA 1446 44.05 MESLEVNLEETREYYKTGTTKEASWRVSQLQALRQFLDQNRQQIYNALSQDLGKHHVEAFRDEIGNLEMSLNFALENLKHWMSPKKAKLPAIALLSSAEVVAQPLGVVLIISSWNFPFGLSLEPLIGALAAGNCVFLKTSEYSPASSAFLAKAIGNYVDNKAVRVVEGGPATGERLLQQRWEKIFFTGSERVGRIVMAAAVKHLTPVTLELGGKCPAIVDSLSFSWDIESTAKRIVIGKFGTCAGQACIAIDYVLVEHKFISTLVELLKKFIKEFFDKSPNQAKSIARIVNKQNFLRLKNLVDEPAVQAAIIYGGSMDEDKLFVEPTILLNPPNDAGIMRDEIFGPILPIIGLDKIEDSIDFVNSRPKPLAIYAFTKDKAFQRRLVSETSSGSLTFNDAIIQYAVDTLPFGGVGESGIGRYHGKFSFDTFSHEKAILKRSFLVDFWFRYPPWNNHKLQLLKHAYNLNYFQFVLIVLGLKKS 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 39531211 39537053 + CrPI670011_02g026270.1 Cre02g2627 491908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2627 481 SUPERFAMILY ALDH-like 9 454 IPR016161 GO:0016491(InterPro)
Cre02g2627 481 Pfam Aldehyde dehydrogenase family 10 435 IPR015590 GO:0016491(InterPro)
Cre02g2627 481 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 416 IPR016163 GO:0016620(InterPro)
Cre02g2627 481 PIRSF ALDH 1 474 IPR012394 GO:0006081(InterPro)
Cre02g2627 481 PANTHER ALDEHYDE DEHYDROGENASE 3 478 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
Cre02g2627 481 FunFam Aldehyde dehydrogenase 12 219 - -
Cre02g2627 481 FunFam Aldehyde dehydrogenase 213 416 - -
Cre02g2627 481 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 434 IPR016162 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2627 Cre-Chr2:39531211 Cre07g1260 Cre-Chr7:26490044 1.10E-163 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2627 K00128 - csv:101205263 863.218