Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2635 ATGGATTCGCCTCAACCATCCCCACCAGAGCTTCATCTTCACAGTCTCACACCCCTCAAAGTTCTCGGAAAAGGAGCCATGGGAACCGTCTTCCTCGTCCACGACCGCCTTTCCGATGAGCCGGCTCATTTCCCCTTTGCTCTCAAAGTCGTCGAGAAATCCTCTTTCGTCTCCAAACTCGACGCCGACCGGCGAGCTCGTTGGGAGATTCAGGTTCTTTCTCGCTTGTCCTTCCCTAAACCCCACCCTTTCCTCCCCCGCATTATTGGTTCCTTCGAATCCGATGAGTTTTTGGGCTGGGCCGTTCCGTACTGTCCCGGCGGCGATCTTAACGTCTTGCGTTACCGTCAATTGGACCGGGTTTTCTCGCCGGCAGTCATTCGGTTCTATTTGGCCGAGATCGTCTGTGCGCTCGACCATCTTCATAGCATGGGCATCGTCTACCGAGATTTGAAGCCAGAGAATGTGTTGATTCAACAATCGGGTCACGTCACTCTCACGGACTTTGATTTGTCGCGTAGTTTGACACGCAGAACAGTAAAAGACGTCGTCTCGCTTGATAACTCCAACCACGAGAAGCCGCCGATCGCCGTCCGGCCAAAACACGGGCGAAACTTGACGCGATGGATTATGACGACCTCCAATGTTAAAGGCGGGTTAAAAAAGGCTAAATCGGCTCGGGTTAGTCCTGTGAGTCGCCGGAAGCCGAGTTTCACGAATGGCGAGCGGTCAAATTCGTTCGTCGGAACGGAGGAGTATGTCTCACCGGAGGTTGTTCGAGGCGACGGTCATGAATTCGCCGTCGACTGGTGGGCCCTGGGGATTCTCACGTACGAGATGCTCTACGGGACGACGCCGTTTAAGGGGAAAAACAGGAAAGAGACGTTCCGAAACGTTTTGGTCAAAGCTCCGGAGTTGATTGGAAAGCGTTCGGATTTAACGGATTTGATCGAACGGTTGCTGGTAAAAGACCCCACGAAGCGGTTGGGGTACGTACGGGGCGCGTGCGAGATCAAAGAGCATGCGTTTTTTAACGGCGTTAAGTGGGACCTATTAACGGAGGTCACGCGACCGCCGTTTTTACCTCCTCGTGAAGAAACGGAATGGGCGGAGAATTTAACGCTCGGTTGTGTGAGTATAACGGAATACTTTCTCAGACAGAGATCGCCACCTTCGTTTCCACCGTCGCCGTCGTCAACTCCGTCGACCTCCTTCAGTTGGCAGAATAACATGTCATTGACGGAGTTCTGA 1251 53.16 MDSPQPSPPELHLHSLTPLKVLGKGAMGTVFLVHDRLSDEPAHFPFALKVVEKSSFVSKLDADRRARWEIQVLSRLSFPKPHPFLPRIIGSFESDEFLGWAVPYCPGGDLNVLRYRQLDRVFSPAVIRFYLAEIVCALDHLHSMGIVYRDLKPENVLIQQSGHVTLTDFDLSRSLTRRTVKDVVSLDNSNHEKPPIAVRPKHGRNLTRWIMTTSNVKGGLKKAKSARVSPVSRRKPSFTNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFRNVLVKAPELIGKRSDLTDLIERLLVKDPTKRLGYVRGACEIKEHAFFNGVKWDLLTEVTRPPFLPPREETEWAENLTLGCVSITEYFLRQRSPPSFPPSPSSTPSTSFSWQNNMSLTEF 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 39631904 39633154 + CrPI670011_02g026350.1 Cre02g2635 491916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2635 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre02g2635 416 SUPERFAMILY Protein kinase-like (PK-like) 17 411 IPR011009 -
Cre02g2635 416 Gene3D Phosphorylase Kinase; domain 1 17 108 - -
Cre02g2635 416 MobiDBLite consensus disorder prediction 222 243 - -
Cre02g2635 416 SMART serkin_6 16 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g2635 416 FunFam Serine/threonine-protein kinase UCNL 16 108 - -
Cre02g2635 416 FunFam Serine/threonine-protein kinase OXI1 242 363 - -
Cre02g2635 416 ProSiteProfiles Protein kinase domain profile. 16 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g2635 416 Gene3D Transferase(Phosphotransferase) domain 1 241 363 - -
Cre02g2635 416 Gene3D Transferase(Phosphotransferase) domain 1 109 177 - -
Cre02g2635 416 FunFam Serine/threonine-protein kinase OXI1 109 177 - -
Cre02g2635 416 MobiDBLite consensus disorder prediction 389 416 - -
Cre02g2635 416 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524(InterPro)
Cre02g2635 416 PANTHER FLIPPASE KINASE 1-RELATED 10 365 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cre02g2635 416 Pfam Protein kinase domain 239 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g2635 416 Pfam Protein kinase domain 19 182 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre02g2635 416 MobiDBLite consensus disorder prediction 399 416 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2635 Cre-Chr2:39631904 Cre09g0814 Cre-Chr9:8180469 4.40E-76 dispersed
Cre02g2635 Cre-Chr2:39631904 Cre02g2508 Cre-Chr2:38353164 4.60E-65 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63919 PF00069 Pkinase 1.50E-30 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2635 - - - 0.0