Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre02g2670 | ATGGCAGTACATGCGGTTGGACTTTCCGCTTCCGGTGCTTTTCCGGCCACCCTTTCTTGCTCGTCCGAGATTGTTCTGCTTCTTTTAATCGTGTCTGAAGTTATTTCCATATTTCCGCATTTACCCATGGGAGAAGACGATGAACAGGATAGACAGAAGATCACAAATCTTCATCTAAGATCGGAAATGATTACTATGGGCCATCCACAGATGGCAAACCAGCCTCATGTAATCAATCAGTCCCAAGTTATGAACCAGCCACAGGTGATTAATCAACCTCAATTTCTGAACCAAGGCCAGCTAATGAACCATTCTCAGATAATGTCTCAGTCACAGGCCATCAACCAGCCAAATCTTCTGCCGCAACCTCAGGCCATGCAGCAGTCCCAGATGATCATGAGTCACTCTCTGCCGCCTATGATGAGTGGCAACTATAAGGTATGGGCACATCCGCAAGCCCCTTTGGATCCTAACAAGAAGTACCGCAACTTCCCGAAGCCTAACTATGGAAATATGAAACAGTCAAGATCGGGGCGAGGAAATTGGAAGGGAAAAGGCGTTAGTGACAAAAGGATAAACAATAGGAGAATGGAAAAACCTTTACCGGGTTCCATAAGTGGTCCAAATAGTGCTGTAGGGTATCAACCTCCAAGTCTTCATGAGCTGCAGTCTCAAAATCGTTTAAGGGCTCGTAAGTTTTACTCTAAAAAGAAGTTCGGTAATAGATTTGCACCTTATGCGCCTCGTAATACCACGTCTTTTATAATTCGTGCAAAGAAGTCTGGTGGGATCGCTTCGCTTGTGTCCCCTAGTCCCGTAACACCCGCTGTGCTTCCTACTCCAATGTTTTCCCCTTCAAGGGAGGCGTTGGGTGATATGGCCAAGGAGGAATGGGGTGTTGATGGTTATGGATCAATGAAAGGGTTAATAAGGCTTCGAGGGTCTGAGAATAAGGCAGAAGTGCAGGATGAGGAAGAAGAGGAAGTTGGTGGTGGTTCGAGTGATAGTGATGTAGAGGAACATCTGGAGGTAGAACGCAGATTGGACCATGATTTGAGCCGATTTGAAATGATATATCAGAATTATGGAGTAGAGTATAATAACTGTTTGGAAAATAGGGTCGATGATCAAGATAGCCATATAGCTCAATTGGAGGAGGAGAACTTGACACTGAAGGAGAAACTTTTTCTTATGGAGAGAGAGCTTGTTGACTTGAGGAGGAAGTTGCAACTTCTCGAGGGGCAAAACCCAGCTATTGAAGATGTGAATGAGGAGGTAGTGGAGAACGTATCTGAGAATGAGAGTGATGGAGGGTTGGAGATGGAGTATGTATCCGAAATTAGACAAAACCAAGATGTTGATGTTGATTCTAAGGAGGAAGATGAAGAAGTCTTAGAGATTGAGGGTGGGGAAGAATGTGTAGGGGAAGATTTCAAGAGAGAGAAAGTGAATGAAAAGAAATACATAGTGAATGATGAAACCGTGAAGGAATCAGATGAACAGATTCCGGAAGACGGTGTGGCAAAAGATGATGAATCAAAGGGTGAACTTATTTCAGGGAAGGTAAATGAATGCGACAATATGGACGAAAACTTGGGTAATATTTTGCACACGGATTCAGGGATTGGAAAAGAAGCCATGGTCAATGATGAAGCCGAGCAGAATAGAGTTGTATCTGTAAAAATAGCTGTAGATGTAAAGGAAGGGTGTGAAGAAATAACGGAGGATTCTGTATCAGGAAACGACTCAGTTAATGCAAGGCTGAGCTGCGAGTCATACGGCTCTTCTAGTAAAGATTTTGGACATGATCATTTGCTTGCATTGGCCTTCCTACGACGTCTAGATTCTGAGGATTCGTTTGCCATCTGGGAAATGATCTGTTGCTGTCTAATGGCTGTTAGTCACTCAAGTCTTCCTCTTACCCTGTGCATGGACTTAAAGTTTGGTCTGTGCCTATTCTTTGTAGTCATGGATGAGCCTTCCATCAGTTCCACAAGCTCGCAATTAACTGTGGATTTCTATAAGAGTTCATGTCCGAATGTTCTCAGAATCGTAAGGACAGAAGTCATGATTGCTATTAAGAATGAGATGCGAATGGCTGCTTCGCTTCTTCGCCTCCACTTTCACGACTGCTTTGTTAATGGTTGTGACGGATCGGTGCTGTTGGATGGAAGTGATGGGGAGAAATTTGCACTTCCCAACATCAATTCGCTTAGAGGGCTTGAAGTTGTGGATAGAATCAAAGCCGCACTGGAGAGTTCATGCCCCGGAGTTGTATCATGTGCTGATTTATTAACTATAGCTGCAAGAGATTCTGTCCTCTTGAGTGGAGGACCGTCATGGAAGGTTTTATTGGGGAGAAGAGATGGATTGGTAGCGAATAAAACAGGAGCTGATCAAGGACTTCCCTCTCCATTTGAAAGCCTTGATGGTATAATTAACAAGTTTGTTGATGTTGGCCTTGCTATCACCGATGTCGTCGCTTTATCTGGAGCCCATACAATTGGATTTGCAAGATGTGCAATGTTCAACAATAGGCTGTTCAACTTCTCAGGAAGTGGTTCTCCAGACCCAACCATGGAGTCCGCCATGGTATCTGATCTCCAAGCTTTATGCCCTCTCACCGACGACGGCAACAAGACCACCGTTCTCGACAGAAACTCCACCGATTTATTCGACAACCATTACTTCAAAAACTTGCTCAACCGGAAGGGCCTCTTGGGCTCCGACCAAATTCTGTTCTCCGACTCCGACGATGCTGCTCAGCCTCAAACCACCACTACAAAAGCCTTGGTCCAAGCTTATAGCTCTAACACCACGCTTTTCTTCGCCGACTTTGTCAAAGCCATGATCAAGATGGGGAATATAAGTCCACTCACCGGCTCCGCCGGTCAGATCCGAAAAAACTGCAGACTCCTTAATTCCTCCTAA | 2931 | 44.76 | MAVHAVGLSASGAFPATLSCSSEIVLLLLIVSEVISIFPHLPMGEDDEQDRQKITNLHLRSEMITMGHPQMANQPHVINQSQVMNQPQVINQPQFLNQGQLMNHSQIMSQSQAINQPNLLPQPQAMQQSQMIMSHSLPPMMSGNYKVWAHPQAPLDPNKKYRNFPKPNYGNMKQSRSGRGNWKGKGVSDKRINNRRMEKPLPGSISGPNSAVGYQPPSLHELQSQNRLRARKFYSKKKFGNRFAPYAPRNTTSFIIRAKKSGGIASLVSPSPVTPAVLPTPMFSPSREALGDMAKEEWGVDGYGSMKGLIRLRGSENKAEVQDEEEEEVGGGSSDSDVEEHLEVERRLDHDLSRFEMIYQNYGVEYNNCLENRVDDQDSHIAQLEEENLTLKEKLFLMERELVDLRRKLQLLEGQNPAIEDVNEEVVENVSENESDGGLEMEYVSEIRQNQDVDVDSKEEDEEVLEIEGGEECVGEDFKREKVNEKKYIVNDETVKESDEQIPEDGVAKDDESKGELISGKVNECDNMDENLGNILHTDSGIGKEAMVNDEAEQNRVVSVKIAVDVKEGCEEITEDSVSGNDSVNARLSCESYGSSSKDFGHDHLLALAFLRRLDSEDSFAIWEMICCCLMAVSHSSLPLTLCMDLKFGLCLFFVVMDEPSISSTSSQLTVDFYKSSCPNVLRIVRTEVMIAIKNEMRMAASLLRLHFHDCFVNGCDGSVLLDGSDGEKFALPNINSLRGLEVVDRIKAALESSCPGVVSCADLLTIAARDSVLLSGGPSWKVLLGRRDGLVANKTGADQGLPSPFESLDGIINKFVDVGLAITDVVALSGAHTIGFARCAMFNNRLFNFSGSGSPDPTMESAMVSDLQALCPLTDDGNKTTVLDRNSTDLFDNHYFKNLLNRKGLLGSDQILFSDSDDAAQPQTTTTKALVQAYSSNTTLFFADFVKAMIKMGNISPLTGSAGQIRKNCRLLNSS | 976 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 39928309 | 39941051 | + | CrPI670011_02g026700.1 | Cre02g2670 | 491951 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre02g2670 | 976 | Gene3D | - | 674 | 974 | - | - | |
| Cre02g2670 | 976 | MobiDBLite | consensus disorder prediction | 494 | 515 | - | - | |
| Cre02g2670 | 976 | ProSitePatterns | Peroxidases active site signature. | 700 | 711 | IPR019794 | GO:0004601(InterPro) | |
| Cre02g2670 | 976 | FunFam | Peroxidase | 803 | 953 | - | - | |
| Cre02g2670 | 976 | CDD | secretory_peroxidase | 668 | 971 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
| Cre02g2670 | 976 | PANTHER | OS02G0832600 PROTEIN | 126 | 469 | - | - | |
| Cre02g2670 | 976 | Gene3D | Peroxidase, domain 2 | 803 | 956 | - | - | |
| Cre02g2670 | 976 | Pfam | Peroxidase | 685 | 937 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre02g2670 | 976 | MobiDBLite | consensus disorder prediction | 314 | 341 | - | - | |
| Cre02g2670 | 976 | FunFam | Peroxidase | 672 | 812 | - | - | |
| Cre02g2670 | 976 | SUPERFAMILY | Heme-dependent peroxidases | 668 | 974 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre02g2670 | 976 | Coils | Coil | 367 | 415 | - | - | |
| Cre02g2670 | 976 | MobiDBLite | consensus disorder prediction | 168 | 188 | - | - | |
| Cre02g2670 | 976 | PRINTS | Haem peroxidase superfamily signature | 777 | 789 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre02g2670 | 976 | PRINTS | Haem peroxidase superfamily signature | 885 | 900 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre02g2670 | 976 | PRINTS | Haem peroxidase superfamily signature | 759 | 776 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre02g2670 | 976 | PRINTS | Haem peroxidase superfamily signature | 825 | 840 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre02g2670 | 976 | PRINTS | Haem peroxidase superfamily signature | 700 | 714 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre02g2670 | 976 | PRINTS | Plant peroxidase signature | 899 | 916 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre02g2670 | 976 | PRINTS | Plant peroxidase signature | 739 | 752 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre02g2670 | 976 | PRINTS | Plant peroxidase signature | 777 | 792 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre02g2670 | 976 | PRINTS | Plant peroxidase signature | 702 | 722 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre02g2670 | 976 | PRINTS | Plant peroxidase signature | 824 | 836 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre02g2670 | 976 | PRINTS | Plant peroxidase signature | 678 | 697 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre02g2670 | 976 | PRINTS | Plant peroxidase signature | 758 | 768 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre02g2670 | 976 | PRINTS | Plant peroxidase signature | 883 | 898 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre02g2670 | 976 | ProSiteProfiles | Plant heme peroxidase family profile. | 668 | 974 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cre02g2670 | 976 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 825 | 835 | IPR019793 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre01g0698 | Cre-Chr1:6632711 | Cre02g2670 | Cre-Chr2:39928309 | 2.90E-81 | dispersed | |
| Cre02g2670 | Cre-Chr2:39928309 | Cre04g1291 | Cre-Chr4:31693565 | 5.70E-90 | dispersed | |
| Cre02g2668 | Cre-Chr2:39915460 | Cre02g2670 | Cre-Chr2:39928309 | 4.00E-147 | proximal | |
| Cre02g2670 | Cre-Chr2:39928309 | Cre02g2671 | Cre-Chr2:39950273 | 8.80E-83 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre02g2670 | K00430 | - | csv:101211007 | 928.702 |