Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2672 ATGGAAATGGCTTCTTCTAAGTTTGGAGTAGTCTTGGCGTTGTTTTGGTCAGTGGGTTTGATGGTGGGAGGGTCCTTGGCTCAGCTAAACCCTTCATTTTACGCCAAAACATGTCCTAATTTACCTAAAATTGTGAATGGTGTGGTTGCACAGGCTCTGCGAACCGATGCTCGAGCTGGAGCCAAGCTGATTCGCCTCCATTTTCACGACTGCTTTGTTGACGGGTGCGATGCGTCTGTTTTGCTAGAGAACGCACCAGGCATAGACAGTGAACTTGATGCCCCTGGAAACCAAGGGATTCAAGGTCTTAACATCGTCGACGACATCAAATCTGCTGTCGAAAAGGCTTGCCCTCGCACTGTCTCTTGTGCCGACATCTTAGCCATAGCCTCCAAAGAATCTGTCGTACTGGCTGGAGGGCCGAGCTGGGTTGTGCCACTAGGGCGAAGAGACAGCAGAACAGCCAATAGAGAAGGAGCCTCAAACAACCTTGCCAGTCCCTTCGAAGATCTGGATACACTCAAAGCCAAGTTTGGTGTTTTTGGCCTCGATTCCACTGATCTTGTGGCTTTGTCTGGAGCACATACATTTGGGCGTTCAAGATGCGCATTTTTCAGCCAACGATTGGCCAACTTCAACGGCACGAACAGGCCAGATCCAACACTAGACCCAGCCTACAGAGAGCAGCTCCGAAGAATTTGCTCTAGTGGCTCAGAGACACGAGCCAATTTCGACCCAACGACTCCAGACAAATTTGACAAAAACTATTATTCCAACCTTCAGGGGCTTCGGGGGCTGCTGCAGAGCGATCAAGAACTGTTCTCAACTCGCGGGGCTGACACGGTGGCCATTGTGAACCGTTTTGCCAAAAGCCAAGGCCAGTTCTTTAAAAGTTTTGGTGCGTCTATGATTAAAATGGGAAACATTACACCTTTAACTGGAACTAAAGGAGAGATTAGATTGAACTGTAGGAGGGTGAATCCAACTAGACCCAGGGGTGATGAGGGTCATGATGTTATGTAA 1023 48.88 MEMASSKFGVVLALFWSVGLMVGGSLAQLNPSFYAKTCPNLPKIVNGVVAQALRTDARAGAKLIRLHFHDCFVDGCDASVLLENAPGIDSELDAPGNQGIQGLNIVDDIKSAVEKACPRTVSCADILAIASKESVVLAGGPSWVVPLGRRDSRTANREGASNNLASPFEDLDTLKAKFGVFGLDSTDLVALSGAHTFGRSRCAFFSQRLANFNGTNRPDPTLDPAYREQLRRICSSGSETRANFDPTTPDKFDKNYYSNLQGLRGLLQSDQELFSTRGADTVAIVNRFAKSQGQFFKSFGASMIKMGNITPLTGTKGEIRLNCRRVNPTRPRGDEGHDVM 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 39956443 39957736 + CrPI670011_02g026720.1 Cre02g2672 491953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2672 340 FunFam Peroxidase 165 306 - -
Cre02g2672 340 PANTHER PEROXIDASE 72-RELATED 20 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 Gene3D - 33 327 - -
Cre02g2672 340 SUPERFAMILY Heme-dependent peroxidases 28 328 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 Pfam Peroxidase 46 291 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 CDD secretory_peroxidase 28 326 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre02g2672 340 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601(InterPro)
Cre02g2672 340 FunFam Peroxidase 32 177 - -
Cre02g2672 340 ProSiteProfiles Plant heme peroxidase family profile. 28 327 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2672 340 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Cre02g2672 340 Gene3D Peroxidase, domain 2 165 306 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2672 Cre-Chr2:39956443 Cre02g2677 Cre-Chr2:39997194 3.80E-126 dispersed
Cre02g2671 Cre-Chr2:39950273 Cre02g2672 Cre-Chr2:39956443 4.00E-120 tandem
Cre02g2672 Cre-Chr2:39956443 Cre02g2673 Cre-Chr2:39964393 5.30E-120 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2672 K00430 - csv:101211507 574.318