Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2677 ATGGCCTCCGCCAATGCCGCAGCCTCCTTTTTCTTTCTGGCTCTTCTCTTCGGAGGCTCTTTAGCTCAACTCTCCGAGACCTTTTACGATCAAACCTGCCCTCGCCTCCCCAACATTGTCCGTGCCTCCGTCAAAAGAGCTATCGAAACCGACATCCGTGCCGGTGCTAAACTCATCCGCCTCCATTTTCATGACTGCTTCGTCAATGGATGTGATGGCTCTGTTTTGCTAGAGGATGCTCCTGGCATAGTTAGTGAGCTCAACTCACCTGGAAATCAAGGAATCCAAGGCCTCGAGATTGTTGACGCCATTAAAGCCGACGTTGAGAGGGAATGCCCCGGCATCGTCTCCTGTGCCGACATTCTAGCTCAAGCTTCCAAGGACTCTGTCGATGTGCAAGGAGGGCCTAGTTGGAGAGTGTTATACGGAAGACGTGACAGTAGAATAGCGAACAAAACAGGGGCGGATAGTGGGTTGGCCAGTCCCTTCGAAACTCTAGACCAACTCAAAGCTAAATTTGCTGCTGTTGGCCTTGGTACCACTGATCTCGTCGCTTTATCAGGAGCGCATACGTTTGGTCGATCGAGATGCAGATTCTTCAGCCACCGATTTGCGAATTTCAACAACACTGGAAGCCCAGACCCATCACTGGATGCTAACTACAGAGGATTCCTTGAAGGGGTTTGCTCAGCAGGTCCAGACACAAGAGCCAATTTCGACCCAGTAACACCCGACGTGTTCGACAAAAACTACTACACAAATCTTCAAGTTGGGAAGGGGCTTCTGCAAAGCGACCAAGAGCTGTTCTCTACTCCAGGGGCTGACACCATCGCCATTGTCAACAGCTTCGCAGCCAGAGAAGGGACCTTCTTCAAGGAGTTCCGGCAGTCCATGATCAACATGGGGAACATCAAGCCTTTGACTGGCAGCCGTGGGGAAATTAGAAGAAACTGCAGGAGGGTTAACTCTGGGTTGGGTGGAGAAGGGCATGATGTTATGTAA 1002 51.1 MASANAAASFFFLALLFGGSLAQLSETFYDQTCPRLPNIVRASVKRAIETDIRAGAKLIRLHFHDCFVNGCDGSVLLEDAPGIVSELNSPGNQGIQGLEIVDAIKADVERECPGIVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRIANKTGADSGLASPFETLDQLKAKFAAVGLGTTDLVALSGAHTFGRSRCRFFSHRFANFNNTGSPDPSLDANYRGFLEGVCSAGPDTRANFDPVTPDVFDKNYYTNLQVGKGLLQSDQELFSTPGADTIAIVNSFAAREGTFFKEFRQSMINMGNIKPLTGSRGEIRRNCRRVNSGLGGEGHDVM 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 39997194 39998467 + CrPI670011_02g026770.1 Cre02g2677 491958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2677 333 PANTHER PEROXIDASE 72-RELATED 13 321 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 FunFam Peroxidase 27 173 - -
Cre02g2677 333 CDD secretory_peroxidase 23 321 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre02g2677 333 ProSiteProfiles Plant heme peroxidase family profile. 23 322 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cre02g2677 333 Gene3D Peroxidase, domain 2 160 301 - -
Cre02g2677 333 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 SUPERFAMILY Heme-dependent peroxidases 23 322 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
Cre02g2677 333 Pfam Peroxidase 40 285 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre02g2677 333 FunFam Peroxidase 160 301 - -
Cre02g2677 333 Gene3D - 28 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2672 Cre-Chr2:39956443 Cre02g2677 Cre-Chr2:39997194 3.80E-126 dispersed
Cre02g2673 Cre-Chr2:39964393 Cre02g2677 Cre-Chr2:39997194 2.10E-113 dispersed
Cre02g2674 Cre-Chr2:39968611 Cre02g2677 Cre-Chr2:39997194 1.20E-105 dispersed
Cre02g2675 Cre-Chr2:39976162 Cre02g2677 Cre-Chr2:39997194 8.20E-142 dispersed
Cre02g2677 Cre-Chr2:39997194 Cre02g2679 Cre-Chr2:40015964 3.10E-104 dispersed
Cre02g2676 Cre-Chr2:39983214 Cre02g2677 Cre-Chr2:39997194 3.00E-136 tandem
Cre02g2677 Cre-Chr2:39997194 Cre02g2678 Cre-Chr2:40006264 3.00E-107 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2677 K00430 - csv:101217781 593.193