Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2727 ATGGCATCCAAATTACATAACCGAACTTATGAAGATTTCGAACCTCCGGTGGAGCGGTCGGAAGAGGATGGCTGCACCATTCTCACCCTCTACATTCCCGGCTTCAGCAAGGAGCAAATTCAGGTTAAGGTATCCTCAAGAAGAAAGTTGAGGATTAGTGGGGAACGGCCTTACAAGAACAGCAAGAGCGCATGGCAGCGCTTCCACAAGGAGTTTGAAATCGCATCAAACTGCGACACTGCCAACATTAGCGCCAAATACAAGGGCGGCATCCTTCATGTCCGCCAACCATTGTTGCAGGACCAGTCCGAGCCACACACACCACCCCATGACCAAACCCCCAAACAACAAGCTGAGAACCCAATTTTGGAAGAACCAAAGCAAACTAATTCATCTGCCAACCACCACGCTCCGGTTACAAACACTCCGAAGATCAACAACAAGCGCTTGAAGGAGATGATTCCCGGAGTGTTCCTGAAGTTGGGATTCTCTATTTTGCTGCCACTTATCTTATTGCTGTTTTGGATCAATGGACCAGCGATCAGCAACCGTGGATCCATGGTCAACGACTTGCAGAAGCTTCGGTTCCTCCACTCAATGCTGCATTGTTCTCACTGCCTCATTCACCGCCAACCCGATCGCTTCGATGACTTCATATGTTGTTCGGGCTGCGGCAAGGTGCTTGGCCAGTTCTTTGGAGGAAAATACATTGATCATAGCAAACCTATACTCGAAGCCGCCGCCAAATTGAAGAAGAGGAAGAAGGAGAAAAGGCAGCAACTCGTCTTAACATGCGACATCAAGGTGATAATCCTTCATCTTCCCTTAAAAAGGCAATCCTCCATATCCGATGGGATTGCGAGAATTTGCTCAGACATGGAGTTGGCCGTCCATTCCCCTCTTTCCTTCTCCACTTATTCATCTCACCCTCCCAATTCCTTAATCCCATCCCTACATAGAAGTAGACTCTTCAGTTTTCCGCCATTGTTATCGCCCCGTCTAAGCTTCCAGTTCCGGCCAAAGGGACGATCACTTCTTCAACCTCTACAAGCTTCCCGTTGGCTTCTGGCACCCGTCGGCGATGGAGAGTGGAAGCATATAGGTTCGAAAGTAGAAATGCCAGATGCTTTCGAAATTGTGTCGAATGAGGTCACCGTTGGCCGCCTTCCTGATAAAGCCGACATTGTAATTCCGGTTGCTACAGTTTCTGCTCTACATGCTCGCATCAAAAACCAAGAAGACAGGCTCTTGGTCATAGATCTAGACAGCACCAATGGGACTTTCATCGATGACAAGAGACTTAACCCTGGGGTTGTTGCTGCTGTATCATCTGGCAATTGCATTACTTTTGGTGACATCCATCTGGCCATGTTTCAGGTCTCAAAGCTGAAAACTGTTGAAGCTGCTACCAAAATCCAAGAAGAATCTGAGGAGCCAATCAGTGATTCTGGAACAAAAGTTAGGGGAGTGGAGTTGACTCCACTCCTTGCTTTGCTTAACCGCAACCATCGAAGCCCTGTGATCCGATTCTTCTCTCTTCCTTTGGAAATGCCGACCAGTTTGGTCCCTTCTCACAGACCGGAGCTTCTCACCGTCGCCGTCGCTGTGGTTGCTGTCGGCGTTGCCACTGCCTACTATTTCTACATCACCAAGAAATCCAAACCCAAAGGTTGCTTGGACCCTAATAACTTCAAGGAATTTAAACTAGTTAAACGCACACAGCTTAGCCATAATGTAGCAAAGTTCAGATTCTCTCTTCCGACGCCAACCTCAATTTTGGGTCTGCCGATTGGGCAGCATATCAGCTGCAGAGGAAAAGATAGCGAAGGTGGAGATGTTGTGAAACCTTACACTCCAACCACTTTGGACACAGATGTTGGATACTTTGATTTGGTCATAAAGATGTATCCACAAGGAAGGATGTCCCACCACTTCCGTGAGATGCGTGAAGGTGATTACTTGGCTGTGAAAGGTCCAAAGGGACGATTCAAGTATGCACCTAACGAAGTTGAGGCCTATGGAATGCTTGCTGGAGGCACAGGCATAACTCCTATGTTCCAGGTTGCAAGAGCAATACTAGAAAATCCAGTGGATCACACCAATGTGCATCTTATATATGCTAATGTAACTTATGAAGACATTCTTCTAAAGGAAGAATTGGATAGTCTTGCGGCTAGGTTTCCCACCCGCTTTACTATCTACTATGTGCTCAATCAGCCTCCTGAAGGATGGGATGGTGGTGTTGGCTTCATAACTGAGGAAATGATACGACTACACTGTCCTGCGCCATCCCCTAATGTTCGGATTTTGAGGTGCGGGCCACCCCCCATGAACAAAGCTATGGCTGCTTACCTCAACACTATTGGCCATCCTCCCCAAATGCAGTTCCTGTTCTAA 2397 47.6 MASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSAWQRFHKEFEIASNCDTANISAKYKGGILHVRQPLLQDQSEPHTPPHDQTPKQQAENPILEEPKQTNSSANHHAPVTNTPKINNKRLKEMIPGVFLKLGFSILLPLILLLFWINGPAISNRGSMVNDLQKLRFLHSMLHCSHCLIHRQPDRFDDFICCSGCGKVLGQFFGGKYIDHSKPILEAAAKLKKRKKEKRQQLVLTCDIKVIILHLPLKRQSSISDGIARICSDMELAVHSPLSFSTYSSHPPNSLIPSLHRSRLFSFPPLLSPRLSFQFRPKGRSLLQPLQASRWLLAPVGDGEWKHIGSKVEMPDAFEIVSNEVTVGRLPDKADIVIPVATVSALHARIKNQEDRLLVIDLDSTNGTFIDDKRLNPGVVAAVSSGNCITFGDIHLAMFQVSKLKTVEAATKIQEESEEPISDSGTKVRGVELTPLLALLNRNHRSPVIRFFSLPLEMPTSLVPSHRPELLTVAVAVVAVGVATAYYFYITKKSKPKGCLDPNNFKEFKLVKRTQLSHNVAKFRFSLPTPTSILGLPIGQHISCRGKDSEGGDVVKPYTPTTLDTDVGYFDLVIKMYPQGRMSHHFREMREGDYLAVKGPKGRFKYAPNEVEAYGMLAGGTGITPMFQVARAILENPVDHTNVHLIYANVTYEDILLKEELDSLAARFPTRFTIYYVLNQPPEGWDGGVGFITEEMIRLHCPAPSPNVRILRCGPPPMNKAMAAYLNTIGHPPQMQFLF 798
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 40403098 40414479 - CrPI670011_02g027270.1 Cre02g2727 492008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2727 798 ProSiteProfiles Forkhead-associated (FHA) domain profile. 384 434 IPR000253 GO:0005515(InterPro)
Cre02g2727 798 Gene3D - 367 464 - -
Cre02g2727 798 Pfam Oxidoreductase NAD-binding domain 675 781 IPR001433 GO:0016491(InterPro)
Cre02g2727 798 Gene3D Translation factors 555 655 - -
Cre02g2727 798 MobiDBLite consensus disorder prediction 125 144 - -
Cre02g2727 798 SUPERFAMILY SMAD/FHA domain 375 458 IPR008984 GO:0005515(InterPro)
Cre02g2727 798 CDD FHA 377 455 - -
Cre02g2727 798 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 8 113 IPR002068 -
Cre02g2727 798 Pfam Oxidoreductase FAD-binding domain 567 665 IPR008333 -
Cre02g2727 798 PRINTS Cytochrome B5 reductase signature 651 665 - -
Cre02g2727 798 PRINTS Cytochrome B5 reductase signature 712 723 - -
Cre02g2727 798 PRINTS Cytochrome B5 reductase signature 615 622 - -
Cre02g2727 798 PRINTS Cytochrome B5 reductase signature 674 693 - -
Cre02g2727 798 PRINTS Cytochrome B5 reductase signature 768 776 - -
Cre02g2727 798 PRINTS Cytochrome B5 reductase signature 593 604 - -
Cre02g2727 798 FunFam Predicted protein 362 464 - -
Cre02g2727 798 SUPERFAMILY HSP20-like chaperones 6 101 IPR008978 -
Cre02g2727 798 CDD ACD_sHsps-like 20 95 - -
Cre02g2727 798 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 562 666 IPR017927 GO:0016491(InterPro)
Cre02g2727 798 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 768 776 IPR001709 GO:0016491(InterPro)
Cre02g2727 798 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 712 723 IPR001709 GO:0016491(InterPro)
Cre02g2727 798 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 674 693 IPR001709 GO:0016491(InterPro)
Cre02g2727 798 CDD cyt_b5_reduct_like 567 798 - -
Cre02g2727 798 PANTHER NADH-CYTOCHROME B5 REDUCTASE 533 798 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Cre02g2727 798 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 654 793 IPR039261 -
Cre02g2727 798 SMART FHA_2 383 434 IPR000253 GO:0005515(InterPro)
Cre02g2727 798 FunFam NADH-cytochrome b5 reductase 656 798 - -
Cre02g2727 798 FunFam NADH-cytochrome b5 reductase 557 656 - -
Cre02g2727 798 SUPERFAMILY Riboflavin synthase domain-like 558 668 IPR017938 -
Cre02g2727 798 Pfam Hsp20/alpha crystallin family 28 103 IPR002068 -
Cre02g2727 798 Gene3D - 1 102 IPR008978 -
Cre02g2727 798 Gene3D - 656 798 IPR039261 -
Cre02g2727 798 Pfam FHA domain 384 451 IPR000253 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2727 Cre-Chr2:40403098 Cre04g0607 Cre-Chr4:23386556 1.10E-118 dispersed
Cre02g2727 Cre-Chr2:40403098 Cre11g1965 Cre-Chr11:31423620 1.50E-43 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2727 K00326 - csv:101219272 507.294