Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre02g2740 ATGAAGCAATGGAGAGGCTTAAATTCAGAATCTCTTGCAACCTTATGGGTATTGTGCACAGCTCTAGCTCTAGCTCCAGCTCCATTTGTTGGATCGGTCTCATCTCCAAAGCACCAATTTCGTGGAATTTCTCCCCAAGATGAGATGTATTACAAGTCGTCGGACATGATCAAATGTAGAGACGGTTCCAACAAATTTTCCAAGGCTCAGCTTAACGATAACTACTGCGATTGCCCTGATGGCACTGACGAACCTGGCACATCTGCATGCCCGAATGGGAAGTTCTATTGTCGAAATGCAGGGCACGTTCCACTTTTATTGTTTTCTTCAAGGGTGAACGACGATATATGTGATTGTTGTGATGGAAGTGACGAATATGACAGCAAAGTCAAATGCCCAAATACGTGCTGGGAAACTGGGAAAGTGGCAAGAGATAAATTGAAGAAAAAGATTTCAACCTTTGAAGAAGGTGTTAAAATTAGAAAACAAGAAGTCGAACAGGCAAAAATTGCAATAATCAAGGATGAGGCAGAGCTATTGAAGTTGAAAGATGAGGAAAAAGTATTAAAAGGACTCGTTGAACAACTCAAAGAGCGCAAAGAACAAATAGAGAAGGTAGAAGAGGAGGAGCGATTATGGAAAGAAAAAGAGGAAAAGAAACGTTTGGAGAGAGAAAAAGATGGGACTAAAAAAACTGAGTCAGAAACAACTAGTGTTGGGGAAAGCAAAACTCATGAAGAAGACAATTGGAAAAAAAATGAAGCTATAGAAAATTATGACAAGGAATATAAACAAGGAGAAGGCAACGATGATGATAAAATTGGGAACTGGGAGGACTCTGCCACAGATCAGGCTAGGATGGAAGAAGAAGTTGATTCAGAACTCGAAGCTCGACTTTCTAATAAACCTGAAACAGAAGCATCATTGCTGAAAGAGGATACAGCAGTAGAGAACGACGAACCCCTGGCTAAATCTAAAACTGGAGAAAATGCTGGCACTAAAGAATCATCTGAAGAAGTCTTGAGAAAGAATGATGCTAGTTCAGAGTTGTCTAGGGAAGAGTTGGGCCGCCTTGTTGCTTCTCGTTGGACAGGAGAAAATACTGAAGAACAGTCAGGGAACATGGATAGTACGAACGATAGTGATGAAGAAAGTCATGATATCTCAAAAGACACACATGAAAATGACGGTTATGCTTCAGAGACTGATGATGATAACCAAAGATACGATGATGACCTAGAGGGTGATTTAGAAGATATCAGAGATGAATTTCGTGATGATTCTACTTCGTCTGAAAGATATTATTCAGATACAGAATTGGACTCACCAGATGTGGATACCCAAGGTAACCCGTCCTGGCTTGAGAAGATACAAAAAACTGTTCGAAATGTCCTCAAAGCTGTCAATATATTCCAGTCTCCAGTGAACCAATCAGATGCTGCTAACGTGCGCAAGGAATATGATGAGTCCAGTGCCAAGTTATCAAAAATACAGTCAAGGATCTCAAGTTTATCACAGAAGCTAAAGAATGATTTTGGTCCAGAGAAGGAGTTCTATTCATTCTATGACCAATGTTTTGAAAGCAAGGAGAACAAATACGTTTACAAAATCTGTCCTTATAAACAAGCTTCGCAGGTTGAAGGGCACTCGACTACTCGTTTGGGGCGCTGGGATAAATTTGAGGACTCATATAGGGTTATGATCTTTTCGAGTGGGGATACGTGCTGGAATGGACCTGATAGAAGCTTAAAGGTCAAGCTAAGATGTGGGCTTAAAAATGACATAACCGATGTAGATGAACCAAGCCGTTGCGAGTACGTGGCATTGTTATCAACCCCAGCTGCTTGTGTAGAGGAAAAGCTTCAGGAACTGAAACACAAGTTGGACATGCTGAGTAAAGAAGAGGCAGAGAAGCATGATGAACTTTGA 1929 40.9 MKQWRGLNSESLATLWVLCTALALAPAPFVGSVSSPKHQFRGISPQDEMYYKSSDMIKCRDGSNKFSKAQLNDNYCDCPDGTDEPGTSACPNGKFYCRNAGHVPLLLFSSRVNDDICDCCDGSDEYDSKVKCPNTCWETGKVARDKLKKKISTFEEGVKIRKQEVEQAKIAIIKDEAELLKLKDEEKVLKGLVEQLKERKEQIEKVEEEERLWKEKEEKKRLEREKDGTKKTESETTSVGESKTHEEDNWKKNEAIENYDKEYKQGEGNDDDKIGNWEDSATDQARMEEEVDSELEARLSNKPETEASLLKEDTAVENDEPLAKSKTGENAGTKESSEEVLRKNDASSELSREELGRLVASRWTGENTEEQSGNMDSTNDSDEESHDISKDTHENDGYASETDDDNQRYDDDLEGDLEDIRDEFRDDSTSSERYYSDTELDSPDVDTQGNPSWLEKIQKTVRNVLKAVNIFQSPVNQSDAANVRKEYDESSAKLSKIQSRISSLSQKLKNDFGPEKEFYSFYDQCFESKENKYVYKICPYKQASQVEGHSTTRLGRWDKFEDSYRVMIFSSGDTCWNGPDRSLKVKLRCGLKNDITDVDEPSRCEYVALLSTPAACVEEKLQELKHKLDMLSKEEAEKHDEL 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 40532918 40556501 + CrPI670011_02g027400.1 Cre02g2740 492021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre02g2740 642 MobiDBLite consensus disorder prediction 218 324 - -
Cre02g2740 642 MobiDBLite consensus disorder prediction 331 356 - -
Cre02g2740 642 ProSiteProfiles MRH domain profile. 523 618 IPR044865 -
Cre02g2740 642 MobiDBLite consensus disorder prediction 405 421 - -
Cre02g2740 642 MobiDBLite consensus disorder prediction 379 404 - -
Cre02g2740 642 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 21 625 IPR039794 GO:0006491(PANTHER)|GO:0017177(PANTHER)
Cre02g2740 642 Gene3D - 518 617 IPR009011 -
Cre02g2740 642 Coils Coil 480 500 - -
Cre02g2740 642 MobiDBLite consensus disorder prediction 422 440 - -
Cre02g2740 642 Coils Coil 165 232 - -
Cre02g2740 642 SUPERFAMILY Mannose 6-phosphate receptor domain 523 616 IPR009011 -
Cre02g2740 642 Coils Coil 614 641 - -
Cre02g2740 642 Pfam Glucosidase II beta subunit-like protein 484 642 IPR036607 -
Cre02g2740 642 MobiDBLite consensus disorder prediction 218 451 - -
Cre02g2740 642 Pfam Glucosidase II beta subunit-like 34 170 IPR028146 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0557 Cre-Chr2:2667600 Cre02g2740 Cre-Chr2:40532918 2.60E-25 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre02g2740 K08288 - csv:101221877 1089.72