Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0325 ATGAATAATAATGTTGCTGCTAATCAACTTGATCGACTTCCAAGCCAAAACAAAGGATCACGTCGGGTGGCGTTCTCCGATTCCCTTCCTAAACACCGACCGACATCCAACGATAGTAACTCTGAGCATTGCAACAAATGTTGTTGTCCTCGTTTATTTGCTTGTTGCGCTTGGATTTGTCTTGGGGTTTTCGGAATTGTTGTTGCCATTCTTATCCTTGGCGTAATATTTATGTCCTTCCTTCAATCAGGATTGCCAGAAATCACCGTAAGAATGTTGAACTTGTCCAAATTCGAGATTAGAAATTCCACAAATCAGAATAATGTTGTGTTAAATGCAAAAGTAGATATGTCAATCGAGATGAGGAACAAGAACGAAAAAATAGAGTTGAGTTATAGCAATATTGTGGTGAATTTGGCGTCAGAAGATGTGAAATTGGGAAGGAGTGTGATTCACGGTTTCTCTCACGATCCTGGAAATACCACATACTTAAATGTAACTATGAATGTTGTGGGAGATTCCACAGATAAAGACAATGTATTGCAGCTAGAAGATGATCGAAAAAGGGTGCAAATGAATGTGCATGTGACAATGGAGGCTACAGTTGATTTTCATGTTGGGATATTCAAATTGAACAAGGTGCCAATCCATGTAGCATGTGATTTTCGACAGTTCCTTCTTTTATATCGAATAAACGAGCCCCCATGTAATATTAGAATGTTTCCCAACCTCAGCCGCACCGCATTCTTTTACAACACTAATCGTCGAGGAACCATGGCAGATGAAGTTCAGAATGATGTGAATGATCAGGTGGCAGATATTGCCCCCTTTGATCCCACTAAGAAGAAGAAGAAGAAGAAGGTTGTGCTTCAGGATCCGACTGATGAGGTTGTTGACAAGTTAGCGGAGAAAACTGAAAGTTTGTCTGTTTCTGATGGTTTGGAGACTACCACATTTTCTGGACTTAAAAAGAAGAAGAAAAAACCAGTAGAGGCTAGCTCCTTGAATGACGATGGTGCAGATGCTACGGAGGATTTGGAAGATCAAGCGGGGGAAAATGAAGACCGTGAGGGAATTGTTCTACAATATCGTTATCCTTGGGAGGGAAGTGATCGCGATTATGAATATGAGGAGCTTCTTGGACGGGTATTCAATATTCTTAGAGAGAATAATCCAGAACTTGCAGGCGATAGGCGTAGAACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTCAATTTCATGGATCTATGTAAAACGATGCACCGGCAGCCAGATCATGTTATGGCTTTCTTACTAGCCGAACTGGGAACCAGTGGCTCTCTTGATGGACAGCAGAGATTAGTTGTTAAAGGAAGGTTTGCACCAAAGAACTTCGAAGGAATTCTGCGTCGATACGTCAATGAATATGTGATTTGCATTGGGTGCAAGAGTCCGGACACTATCCTTTCAAAGGAGAACCGACTTTTCTTTCTCAGATGCGAGAAGTGTGGTTCTGGACGATCAGTTGCTCCAATTAAAGCTGGATTTGTGGCTCGTGTTGGCCGGAGGAACACTGGGACATGA 1587 41.9 MNNNVAANQLDRLPSQNKGSRRVAFSDSLPKHRPTSNDSNSEHCNKCCCPRLFACCAWICLGVFGIVVAILILGVIFMSFLQSGLPEITVRMLNLSKFEIRNSTNQNNVVLNAKVDMSIEMRNKNEKIELSYSNIVVNLASEDVKLGRSVIHGFSHDPGNTTYLNVTMNVVGDSTDKDNVLQLEDDRKRVQMNVHVTMEATVDFHVGIFKLNKVPIHVACDFRQFLLLYRINEPPCNIRMFPNLSRTAFFYNTNRRGTMADEVQNDVNDQVADIAPFDPTKKKKKKKVVLQDPTDEVVDKLAEKTESLSVSDGLETTTFSGLKKKKKKPVEASSLNDDGADATEDLEDQAGENEDREGIVLQYRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1702144 1715287 + CrPI670011_03g003250.1 Cre03g0325 492355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0325 528 Gene3D - 371 513 - -
Cre03g0325 528 MobiDBLite consensus disorder prediction 17 43 - -
Cre03g0325 528 Pfam Domain found in IF2B/IF5 397 506 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Cre03g0325 528 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 477 512 IPR016190 GO:0003743(InterPro)|GO:0006413(InterPro)
Cre03g0325 528 FunFam Eukaryotic translation initiation factor 2 subunit 371 513 - -
Cre03g0325 528 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 283 514 IPR045196 GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005850(PANTHER)|GO:0006413(InterPro)|GO:0031369(PANTHER)
Cre03g0325 528 MobiDBLite consensus disorder prediction 320 334 - -
Cre03g0325 528 Pfam Late embryogenesis abundant protein 120 220 IPR004864 -
Cre03g0325 528 MobiDBLite consensus disorder prediction 338 352 - -
Cre03g0325 528 SMART eIF2Bneu4 398 507 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Cre03g0325 528 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 373 480 IPR016189 GO:0003743(InterPro)|GO:0006413(InterPro)
Cre03g0325 528 MobiDBLite consensus disorder prediction 320 357 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0325 K03238 - csv:101220978 521.161