Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre03g0328 | ATGAGAGCGGGCTTGTCCAATGCTAGCTGCGGCTACCCCTGCCGTGATTCGTGCATGGTCCCGGAGGGTCGAGAGACGGAACTCCCTACTTCGGAGTCCTCTCTGTCGAACTATGAACACTTTTTAGGACCTTTCGTACTTGGGCATGAGAGCACTGGAGCAAGCAACAGGGTATACATCATCTGCTTGAATTTTTGTACATCCAAGAGCTACACCATGGATCTTGTCCTGTTGGAGAAGGCTCTAGTGGGGATCTTCGTGGCCATGGTTGTTGCCATTAGCATATCCAAATTGAGGGGCAAGCGTTTTAAACTCCCACCAGGTCCCATTCCCATCCCCATATTTGGGAATTGGCTGCAGGTTGGGGATGACTTGAACCACCGCAACTTGACGGAGCTGGCCAAAAAGTTCGGTGACATATTGCTGTTGAGAATGGGGCAACGAAACTTGGTGGTGATTTCTTCACCAGAGTTGGCCAAGGAAGTGCTACACACCCAAGGAGTAGAATTTGGGTCTAGGACAAGAAACGTGGTGTTCGATATCTTCACAGATAAGGGTCAAGATATGGTGTTCACGGTGTACGGCAAGCACTGGATGAAAATGAGGCGAATCATGACCATTCCTTTTTTCACCAATAAGGTGGTTCAGCAGAACAGGTTTAGTTGGGAGGACGAGGCTGCCAGAGTTGTGGAGGATCTAAAGAATAACCCAGAAGCCTCAACCACCGGCGTGGTTCTGAGGAAGCGGCTACAGCTTCTAATGTATAACAATATGTACAGAATGATGTTTGACAAGAGATTCGACAGCATGGAAGACCCTCTGTTCAACAACCTTAAGCATATAAACGCAGAGAGGAGTCGACTATCTCAGAGCTTTGAATACAACTATGGTGATTTCATCCCCATACTCAGGCCTTTCCTTAGAGGCTATTTGAATGTGTGTAAGGACGTCAAAGAGAGGAGGCTCAAGCTCTTCAAAGACCATTTTGTCGATGAGAGGAGGAGACTAACTAGCACCATGAGCAACAAGGAGGATGGTGTAAAATGTGGCATTGATCATATTGTGGAGGCTCAAGAGAATGGTGAGATCACCGAAGACAATGTTCTCTTCATTGTTGAGAATATCAACGTTGCTGCTATTGAGACAACATTGTGGTCAATGGAGTGGGCTATTGCGGAGCTAGTTAACCACCCCAACATCCAGGAAAAGCTGAGGAACGAGCTCGATTTGGTGCTCGGATATGGCGTCCAAATTACGGAGCCCGACATTCGCAATCTACCTTACTTGCAGGCTGTCATCAAGGAGACTTTGCGGTTGAGAATGGCCATTCCTTTGTTAGTGCCTCACATGAATCTCCAAGACGCCAAGTTGGCTTCTTATGACATTCCGGCAGAAAGCAAGATTCTAGTGAATGCATGGTGGTTGGCCAACAACCCTGATCACTGGAACAAACCTCAAGAATTCCGACCTGAGAGGTTTTTGGAGGAGGAGCAACATGTAGATCCTATAGGGAATGACTTTAGATACCTTCCTTTCGGTGCCGGGAGGAGGAGCTGTCCTGGCATTGTTCTTGCCTTGCCCATCGTTGCTATTACTTTGGGTCGTCTCATTCAAAATTTTGAGCTGCTGCCTCCTCTTGGACACTCCAAGATTGATACCACCGAAAAGCCTGGACAGTTCAGCTTGCAAATATTCAACCACTCTACTATTGTGGCAAAGTCAAGGTCTTTATGA | 1734 | 47.29 | MRAGLSNASCGYPCRDSCMVPEGRETELPTSESSLSNYEHFLGPFVLGHESTGASNRVYIICLNFCTSKSYTMDLVLLEKALVGIFVAMVVAISISKLRGKRFKLPPGPIPIPIFGNWLQVGDDLNHRNLTELAKKFGDILLLRMGQRNLVVISSPELAKEVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGKHWMKMRRIMTIPFFTNKVVQQNRFSWEDEAARVVEDLKNNPEASTTGVVLRKRLQLLMYNNMYRMMFDKRFDSMEDPLFNNLKHINAERSRLSQSFEYNYGDFIPILRPFLRGYLNVCKDVKERRLKLFKDHFVDERRRLTSTMSNKEDGVKCGIDHIVEAQENGEITEDNVLFIVENINVAAIETTLWSMEWAIAELVNHPNIQEKLRNELDLVLGYGVQITEPDIRNLPYLQAVIKETLRLRMAIPLLVPHMNLQDAKLASYDIPAESKILVNAWWLANNPDHWNKPQEFRPERFLEEEQHVDPIGNDFRYLPFGAGRRSCPGIVLALPIVAITLGRLIQNFELLPPLGHSKIDTTEKPGQFSLQIFNHSTIVAKSRSL | 577 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 1720893 | 1724035 | + | CrPI670011_03g003280.1 | Cre03g0328 | 492358 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre03g0328 | 577 | PRINTS | E-class P450 group I signature | 134 | 153 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g0328 | 577 | PRINTS | E-class P450 group I signature | 387 | 413 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g0328 | 577 | PRINTS | E-class P450 group I signature | 471 | 495 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g0328 | 577 | PRINTS | E-class P450 group I signature | 519 | 542 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g0328 | 577 | PRINTS | E-class P450 group I signature | 367 | 384 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g0328 | 577 | PRINTS | E-class P450 group I signature | 509 | 519 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g0328 | 577 | PRINTS | E-class P450 group I signature | 158 | 179 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g0328 | 577 | PRINTS | E-class P450 group I signature | 253 | 271 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g0328 | 577 | PRINTS | E-class P450 group I signature | 430 | 448 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g0328 | 577 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 73 | 575 | - | GO:0004497(PANTHER)|GO:0009808(PANTHER)|GO:0016710(PANTHER) | |
| Cre03g0328 | 577 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 512 | 521 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre03g0328 | 577 | CDD | CYP73 | 135 | 568 | - | - | |
| Cre03g0328 | 577 | FunFam | Trans-cinnamate 4-monooxygenase | 95 | 569 | - | - | |
| Cre03g0328 | 577 | PRINTS | P450 superfamily signature | 378 | 395 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g0328 | 577 | PRINTS | P450 superfamily signature | 431 | 442 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g0328 | 577 | PRINTS | P450 superfamily signature | 510 | 519 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g0328 | 577 | Gene3D | Cytochrome P450 | 96 | 570 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g0328 | 577 | Pfam | Cytochrome P450 | 106 | 563 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre03g0328 | 577 | SUPERFAMILY | Cytochrome P450 | 106 | 561 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre03g0328 | Cre-Chr3:1720893 | Cre11g1572 | Cre-Chr11:25465654 | 1.40E-181 | dispersed | |
| Cre02g2209 | Cre-Chr2:35761803 | Cre03g0328 | Cre-Chr3:1720893 | 6.30E-242 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre03g0328 | K00487 | - | csv:101208511 | 915.605 |