Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0353 ATGTCGACCACCCACAACCCCCAACTGGTCTGCGTCACCGGCGCCAGTGGCTGTATCGGATCCTGGCTCGTTCACCTCCTCCTCCTCCGCGGCTACTCCGTTCACGCCACCCTCCAAAATCTCAAGGACGAGAGCGAAACCAAGCATCTGGAAGATTTAGAAGGAGCAGATGCTCGTCTTCGTCTCTTCCAAATCGACCTCCTCGATTATGACTCCATTGTCCCCGCCGTCACTGGTTGTGCTGGCGTCTTCCACGTCGCGTCTCCTTGCATCGTTGATCCTGTACAAGATCCTGAGAGGGATTTATTGGATCCGGCTATCAAAGGAACCATCAATGTCCTGACGGCGGCCAAGGAGGCTGGGGTACAACGCGTAGTGGTGACTTCTTCTATCTCAGCCATGATTCCGAACCCTAACTGGCCGGCGAATGTTGTAAGGAATGAAGAATGTTGGACCGATATTGATTACTGCAAGAAAAAGGGGCTGTGGTATTCAATTTCAAAAACTCTAGCAGAAAAGGCTGCTTGGGATTTTGCTAAGGAGAAAGGATTGGATGTGGTGGTGATTAATCCAGGCACAGTGATGGGCCCTGTGTTTCCTCCCAGAATTAATGCCAGCATGCAAATGCTTTTAAAACTTCTTCAGGGGTGCAGTGAGACATTCGAGGACGTTTTTATTGGAGTAGTGCACTTTAAAGATGTTGCATTAGCACACATTTTGGTCTATGAAAACAAATCAGCTACAGGAAGGCACTTTTGTGCTGAGGCCATAGCTCGTTACTCTGACTATGTAGCGAAGGCTGCTGAACTCTTCCCTCAGTATAATGTGCCCAGATCGGTAGAAGATACACAGCCTGATTTGGTGAGAGCAAAAGATGGAGCCAAGAAGTTGATGAACCTGGGGCTGGAATTCATCCCAATGGAACAAATTCTCAAGGACGCCGTTGAGGATCTAAAAAAGAAGGGATATATTTCCTGA 978 48.57 MSTTHNPQLVCVTGASGCIGSWLVHLLLLRGYSVHATLQNLKDESETKHLEDLEGADARLRLFQIDLLDYDSIVPAVTGCAGVFHVASPCIVDPVQDPERDLLDPAIKGTINVLTAAKEAGVQRVVVTSSISAMIPNPNWPANVVRNEECWTDIDYCKKKGLWYSISKTLAEKAAWDFAKEKGLDVVVINPGTVMGPVFPPRINASMQMLLKLLQGCSETFEDVFIGVVHFKDVALAHILVYENKSATGRHFCAEAIARYSDYVAKAAELFPQYNVPRSVEDTQPDLVRAKDGAKKLMNLGLEFIPMEQILKDAVEDLKKKGYIS 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1935417 1937948 + CrPI670011_03g003530.1 Cre03g0353 492383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0353 325 CDD FR_SDR_e 10 302 - -
Cre03g0353 325 FunFam Cinnamoyl-CoA reductase 1 3 325 - -
Cre03g0353 325 Pfam NAD dependent epimerase/dehydratase family 10 251 IPR001509 -
Cre03g0353 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 316 IPR050425 GO:0016616(PANTHER)
Cre03g0353 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 319 IPR036291 -
Cre03g0353 325 Gene3D - 2 325 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0353 Cre-Chr3:1935417 Cre10g0943 Cre-Chr10:12599316 2.90E-91 dispersed
Cre03g0353 Cre-Chr3:1935417 Cre09g0311 Cre-Chr9:3032537 4.40E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0353 - - - 0.0