Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0365 ATGGTTGACAACGGCGAGGAGAAGTTGCTGGCTATGGCTCGCCACATAGCCAAGACCATGGGTCGCAACGAGTCCATGGCTGATGATATTCTTCAGATTTTTTCCAATTTTGATGCTAGGTTTTCCCTTGATAAGTTGTCTGATAAACCCGATGAGCTTGACCCCAGAGCCCCCCCCGCTTTGCAACGCTCTCTCAAGTCTTTGGACCGCCGGATCTCCCAATACTTGGCTGCCGACCACCCCATTTGGGCTGACTCCGCCGATTCCTCTGCTTTCCTTGACGCTATCGATGAGTTGATGGTTATCATTAGGGACTGGGCTCCTATGGCTAGGGATAAGTCTGTTACCGCCTACCTTGCTCGCGCCGACGATCTGATGCAGCAGGCTATGTTCCGTGTCGACCAAGAGTTCCGGTCGTTGATGGACCGTGGAGGTGAGTCTTTTGAATTGACTCGCCATTTCAGGAACGGCGAGTCAACGGGGGATTTCTGCTTCGATTCTGAGGAAGATGAGGAAGGAATTCTTGGCGATGGCGATGCTCTCCAGATCCCTGTGGCGCAGCCGGTGACGGACTATAACATCGTTATCGATGCACTTCCGTCGGGGACTATCAGCGATCTTCATGAAATAGCGAAGCGTATGGTAGCGGCTGGGTTCGAGAAAGAGTGTTCACACGCTTACAGTAGCTGCAGGAGGGAGTTTTTGGAGGAGAGTCTTTCTAGGTTGGGGTTACAGAAGCTGAGCATCGATGAAGTTCAAAAGATGCAATGGCATGACCTTGAAGAGGAGATTGAACGCTGGATGAAAGCGATTACCGTCTCCCTTCGAATTCTCTTCCCAAGTGAACGACGCCTCTGCGAACGCGTCTTCGTCGGCCTCTCCTCCACCGCCGATCTTTCTTTCATGGAGGTCTGCCGTGGATCGACTATCCAGCTATTGAATTTTGCAGATGCGGTAGCAATTGGCTCCCGCGCGCCGGAACGACTTTTCAAAATCCTCGATATGTTCGAGACCTTGAGAGACTTGATGCCAGAATTCGATTCAGTATTTTCAGATCAGTACTGCTTATTGCTTAGAAATGAAGCAATTACAATCTGGAAAAGGTTAGGCGGAACAATCAAAGGGATCTTCATGGAGCTTGAGAATTTGATCCGCCGTGATCCGGCTAAAACTCCGGTCCCGGGGGGCGGCCTTCATCCAATCACTCGATATGTGATGAATTACCTTAGAGCAGCCTGTAAATCTCGGCAGACTTTGGAGCAAGTTTTCGAAGAAGCTGCTCTTCCCTCTAAGGATTACACTAAGCTCGAGGACAGAGCAGCAGCATCGTCTTCCTTATCAGTTCAAATGGACTGGATAATGGAGCTTTTAGAGAGCAATTTAGAGGCGAAATCGAAGATATACAAGGATCTTTCCTTAAGCTCTGTGTTTCTGATGAACAATGGGCGATACATTGTTCAGAAAGTGAAAGACAGTGAATTAGGGTCAGTTTTAGGCGAGGATTGGATTCGAAAACACTCGGTTAAAAACCGGCAATACCTCGGAAACTACCTGAAAAGCTCATGGAGCAAGGTGGTCGGAGCATTGAAAATGGACAGTGGCACTATAGCTCCGGCTGTGATGAAGGAGAAGCTCCAATCATTCAATATGCAATTTGAAGAAATCTGCCAAACCCAATCCACATGGGTGATATTTGAGCATCAGCTTAGAGAAGAAGCAAGAATCTCAGTTGCCAAAATTCTGTTGCCAGCATATCAAAAGTTCATCGGCAGGTACCAGAGTTTGCCGGAGTTGGCAAAGCGTACTGACCGGTATTTGAAGTACACGGTGGAGGATATGGAGGCTCGAATCACCGAGCTGTTCGAAGGCGGCGGCGGCTCAGGCAGTGGAAGGAGGTAA 1899 49.03 MVDNGEEKLLAMARHIAKTMGRNESMADDILQIFSNFDARFSLDKLSDKPDELDPRAPPALQRSLKSLDRRISQYLAADHPIWADSADSSAFLDAIDELMVIIRDWAPMARDKSVTAYLARADDLMQQAMFRVDQEFRSLMDRGGESFELTRHFRNGESTGDFCFDSEEDEEGILGDGDALQIPVAQPVTDYNIVIDALPSGTISDLHEIAKRMVAAGFEKECSHAYSSCRREFLEESLSRLGLQKLSIDEVQKMQWHDLEEEIERWMKAITVSLRILFPSERRLCERVFVGLSSTADLSFMEVCRGSTIQLLNFADAVAIGSRAPERLFKILDMFETLRDLMPEFDSVFSDQYCLLLRNEAITIWKRLGGTIKGIFMELENLIRRDPAKTPVPGGGLHPITRYVMNYLRAACKSRQTLEQVFEEAALPSKDYTKLEDRAAASSSLSVQMDWIMELLESNLEAKSKIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGEDWIRKHSVKNRQYLGNYLKSSWSKVVGALKMDSGTIAPAVMKEKLQSFNMQFEEICQTQSTWVIFEHQLREEARISVAKILLPAYQKFIGRYQSLPELAKRTDRYLKYTVEDMEARITELFEGGGGSGSGRR 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2033048 2034946 + CrPI670011_03g003650.1 Cre03g0365 492395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0365 632 Pfam Exo70 exocyst complex subunit C-terminal 266 618 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cre03g0365 632 PANTHER EXOCYST COMPLEX PROTEIN EXO70 63 623 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Cre03g0365 632 FunFam Exocyst subunit Exo70 family protein 76 629 - -
Cre03g0365 632 SUPERFAMILY Cullin repeat-like 83 622 IPR016159 -
Cre03g0365 632 Gene3D Exocyst complex component Exo70 82 628 - -
Cre03g0365 632 Pfam Exocyst complex component Exo70 N-terminal 86 142 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0365 Cre-Chr3:2033048 Cre09g1672 Cre-Chr9:34462743 8.70E-108 dispersed
Cre03g0365 Cre-Chr3:2033048 Cre03g0511 Cre-Chr3:3644108 1.80E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0365 K07195 - csv:101204511 1157.13