Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0376 ATGAACAACCCATCACAGGAAAATGTTGAAACAGAAGGCATCTCTCCAAAGAATGTGAAGAATGAGTCCTACAGAAGTGTGCTTATGTTGGCTTACCAAAGTCTAGGAGTTGTTTATGGGGACCTCAGCACCTCCCCTCTCTATGTCTACAAAACCACCTTCTCTGGGAAATTGAGTCTCCATGAGAATGATGAAGAGATTTATGGGGTTCTATCCTTTATCTTCTGGACATTTACACTCATTGCTCTCTTCAAATATGTTTTCATTGTCATGTCAGCCGACGATAACGGTGAAGGGGGTACCTTTGCACTGTACTCTCTTCTCTGTAGGCATGCTAGATTATGCATATTACCGAATCAAGAGCCTGTAGATGAACAGTTATCAGCATATGACATCAAGGGAATCTCGGAGACAAGGCCGAGTGCTGCTCTAAAGTCCTTTTTTCGGCTGCATCCATCTTTTCGAAGAGGTTTTTTGTTGTTTGTTCTCTTCGGAACCTGCATGGCTATTGGTGATGGAGTGCTTACTCCTGCAATATCAGTTCTTTCAGCAGTCTCAGGAGTCAAACATAAGATCACTGGACTCCATGAGAATTACGTTGTTTTAATCTCGTGCGTCATCTTAGTTGGACTATTCTCCCTCCAACATCGTGGAACACACAAAGTTGCTTTCATGTTTGCTCCAATCATCACGGTGTGGCTTGTCTGTATTAGTGTTATCGGAATGTATAATATTATCAAATGGAACCCAAGTATTTATCACGCACTCTCTCCAGTTTATATGCTGAAATTCCTTCGAAGCACAGGTGTTGAAGGTTGGATTTCATTAGGTGGAATTGTTCTCTCCATAACAGGTGTGGAGGCAATGTTTGCTGATTTAGGCCACTTCTCTTCACTTTCGATCAAGATTGCCTTCACATTTCTTGTATATCCCTCCTTGATACTTGCTTATTTGGGTGAGGCTGCATTTCTCTCTAAGCACCATGAAGATATTCAGAGAAGCTTCTACAAAGCAATACCTGAAGCTGTGTTTTGGCCAGTGTTCATCGTGGCCACTTTTGCTTCTGTCGTAGGAAGTCAGGCGGTGATTTCTGCTACATTCTCCCTCGTAAACCAGTGCTGTGCTCTAAATTGTTTCCCCCATGTGAAAACTATGCACACTTCGAATCAGATATATGGGCAGATTTATATCCCAGAAGTTAATTGGATGCTAATGTGCCTTTGTTTAGCTGTGACAATTGGCTTGAGAGACACAAACATGATAGGCCATGCATATGGGCTGGCAGTCACCATTGTTATGTTTGTCTCAACTTGCTTGATGACACTTGTGATGATAATTGTTTGGAAGCAGAGGTTGATCAATGCCATAGCATTTTTCATGTTTTTTGGGTCGATCGAACTACTTTACATCTCTGCATCAATTGTCAAAGTTCATGAAGGCGGTTGGATCCCTCTCGTGTTTTCTACTATCTTTATGTGTTCGATGTATGCATGGTACTATGGGACGATGAAGAAACACGAATACGACGACGAGAACAAAGTGTCGATGAATAGGATACTTTCTTCAGGGCCTAGCCTCGGCATAGTGCATGTGCCCGGAATTGGACTCATATACACTAATCTGGTCGCTGGTGTTCCTGCTGTTTTTGGTCACTTTGTAACCACTTTGCCTGCATTTCATCAAGTGCTTGTATTTGTTTGTATAAAATACGTTCAAGTTCCCCATATTGACGAAGAAGATCGTTTGCTCATTTCGAGGGTGGGGCCGAAAGAATGCAACATGTTTCGGTGCATTGTCCGGTATGGTTACAGGGATTTGCTACAAGAAAACTACAATTTCGAGAACAGATTGGTGTTTTCCTTAGTGCATTATGTAGAAACAGAAGATCACTTTTGGAAACCAATGACACAAGTCTCTAGAGGGTGTGAAAATTCAGAAGAACCTTGTGAATATGAACCATTGGAGCAGGCTTTTACAAGCTCAAATATGTTGCAGTCTTCTAACAAATATCAAGCAACGGATACTGCAGTCGACGACCGGGAAAAGTCTATACATAATGAGGAAGCGATGCAGATATTGAGAGCGAAAGAATCGGGAATCACGTACATCTTTGGACATTGCTCAGTCAAGGCCAAGAAATCATCTTCCATTTTCAAGAAGTTAGCCATTGATATTGTGTATGCTTTTTTGAAACAAAATTGTAGAGAGCCTGAGGTTTTACTGAATGTGCCTCACACTTCTCTCTTGGAAGTAGGCATGGTATATTATGTATAG 2274 41.64 MNNPSQENVETEGISPKNVKNESYRSVLMLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLHENDEEIYGVLSFIFWTFTLIALFKYVFIVMSADDNGEGGTFALYSLLCRHARLCILPNQEPVDEQLSAYDIKGISETRPSAALKSFFRLHPSFRRGFLLFVLFGTCMAIGDGVLTPAISVLSAVSGVKHKITGLHENYVVLISCVILVGLFSLQHRGTHKVAFMFAPIITVWLVCISVIGMYNIIKWNPSIYHALSPVYMLKFLRSTGVEGWISLGGIVLSITGVEAMFADLGHFSSLSIKIAFTFLVYPSLILAYLGEAAFLSKHHEDIQRSFYKAIPEAVFWPVFIVATFASVVGSQAVISATFSLVNQCCALNCFPHVKTMHTSNQIYGQIYIPEVNWMLMCLCLAVTIGLRDTNMIGHAYGLAVTIVMFVSTCLMTLVMIIVWKQRLINAIAFFMFFGSIELLYISASIVKVHEGGWIPLVFSTIFMCSMYAWYYGTMKKHEYDDENKVSMNRILSSGPSLGIVHVPGIGLIYTNLVAGVPAVFGHFVTTLPAFHQVLVFVCIKYVQVPHIDEEDRLLISRVGPKECNMFRCIVRYGYRDLLQENYNFENRLVFSLVHYVETEDHFWKPMTQVSRGCENSEEPCEYEPLEQAFTSSNMLQSSNKYQATDTAVDDREKSIHNEEAMQILRAKESGITYIFGHCSVKAKKSSSIFKKLAIDIVYAFLKQNCREPEVLLNVPHTSLLEVGMVYYV 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2182806 2187410 - CrPI670011_03g003760.1 Cre03g0376 492406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0376 757 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 19 757 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre03g0376 757 NCBIfam potassium uptake protein 30 757 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre03g0376 757 Pfam K+ potassium transporter integral membrane domain 30 521 IPR053951 -
Cre03g0376 757 Pfam K+ potassium transporter C-terminal domain 532 755 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0376 Cre-Chr3:2182806 Cre05g1412 Cre-Chr5:16837140 7.00E-229 dispersed
Cre03g0376 Cre-Chr3:2182806 Cre05g2687 Cre-Chr5:37815408 1.90E-226 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0376 K03549 - csv:101222845 1427.54