Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre03g0379 | ATGGCGAAAACGGCGGCGCTTTCGTGGACGCGAAGTAAGTGTCTCATCGGAAAGGGCTCCTTTGGAACAGTGAGTGTCGGAATCGGGAAATCGGACGGTCGGATTTTCGCGGTGAAATCTGTGGAGCAGAGTAATGGATTTCGGCGACAAATTGAGTGTTTAGAGAACGAAATTCGGATTCTCCGATCCTTGAATTCGCCTTACGTTGTGGGGTTTCTTGGCGATGATGTTTCTGTTGAGTCTCCCACGACGTCGTTTCGAAATCTGCACATGGAGTATTTGCCAGGTGGCACCCTTGCCGACGATCCCACCGGGGCCGGCGGTGAGAAGCTTTTACGGGAGAGAACATGGTGCCTCGTTTCGGCTCTGAGTTACATTCACTCGAAAGGAATTGTCCATTGTGATGTTAAAGGGAGGAACATTTTGATCGGATTGAATCCCGGGGTCGTGAAATTGGCTGATTTCGGCTCTGCAATTGAGCTTTCCGGCGCCGACGACAGGTGTCGGGGTTCGGTTGCGCCACGTGGGAGTCCACTGTGGATGGCGCCGGAGGTGGTCCGGGGAGAATTTCAGGGGCCGGAATCGGATGTTTGGTCCGTTGGGTGCACGGTCATTGAAATGGTCACCGGAAAACCGGCGTGGGAAGATTTCGGAGCCGATACGCTGAGTCGAATCGGATTTTCGGATGATTTGCCGGAGTTTCCAACACGGTTGTCAGAAGTCGGCCGGGATTTTCTCCGGAAGTGTCTCAGAAGGAATCCTAGTGAACGGTGGAGCTGTGATCGGCTGCTGCAGCATCCATTTCTGGCGGCGGCGGCCTCGCCGGAGATTGCTGTAGAGAATTCCCCCAGGTGTGTGCTTGACTGGGTCAACGGCAGTTTCTCCGACGAAGAGGAGGAAATTCCGATCGCCAACGAAACCTCCGGCTCCGGTGGGCAGGAAAATGAGATCTCTGCTAAGGAAAGAATTGGGAAATTGAGTACGAGTGAGTGGCCGAATTGGGAATCGGACGGTTGGTCGCCGGTGAGAAGATGTTGCAGTGAAGCGGCGGCGGAGACGGAGGCGAGCGGTCGGGAAGAAGAAAAAGAAAAGAGAGGGGCAGAATGGGAATATGTAAATTTGAGAGGGGTAGAAGGGGGAATGGAGGGGACAAGTTCGGAATATTCGGAGTTTGTAACAGACAATCACGGAAAATTGGGTGCCGAATATTCAAATCCTGGCGGTAAGAAAATTTCGGAGCGGCCACGTAATAATTACGGCGGCGGTGACGGTGACGGTGGCGTTAGCGGTGGATTAAGTTTCCGGCGGTGGGGGTTTGAAGGATGTGCAATTACAACAATAACCTCGGGGATATACTCAATTGAATTGATATTATGTTATTATTGGAAAATATTAATGAAGCAATTGGTGTTATTTGGGAATTACACTTTATTACCTTTCTTTTCTGCCTAA | 1452 | 51.45 | MAKTAALSWTRSKCLIGKGSFGTVSVGIGKSDGRIFAVKSVEQSNGFRRQIECLENEIRILRSLNSPYVVGFLGDDVSVESPTTSFRNLHMEYLPGGTLADDPTGAGGEKLLRERTWCLVSALSYIHSKGIVHCDVKGRNILIGLNPGVVKLADFGSAIELSGADDRCRGSVAPRGSPLWMAPEVVRGEFQGPESDVWSVGCTVIEMVTGKPAWEDFGADTLSRIGFSDDLPEFPTRLSEVGRDFLRKCLRRNPSERWSCDRLLQHPFLAAAASPEIAVENSPRCVLDWVNGSFSDEEEEIPIANETSGSGGQENEISAKERIGKLSTSEWPNWESDGWSPVRRCCSEAAAETEASGREEEKEKRGAEWEYVNLRGVEGGMEGTSSEYSEFVTDNHGKLGAEYSNPGGKKISERPRNNYGGGDGDGGVSGGLSFRRWGFEGCAITTITSGIYSIELILCYYWKILMKQLVLFGNYTLLPFFSA | 483 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2208967 | 2210418 | - | CrPI670011_03g003790.1 | Cre03g0379 | 492409 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre03g0379 | 483 | Gene3D | Transferase(Phosphotransferase) domain 1 | 5 | 316 | - | - | |
Cre03g0379 | 483 | SUPERFAMILY | Protein kinase-like (PK-like) | 14 | 284 | IPR011009 | - | |
Cre03g0379 | 483 | Pfam | Protein kinase domain | 15 | 269 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre03g0379 | 483 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 131 | 143 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre03g0379 | 483 | ProSiteProfiles | Protein kinase domain profile. | 10 | 269 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre03g0379 | 483 | FunFam | Serine threonine protein kinase putative | 7 | 327 | - | - | |
Cre03g0379 | 483 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 5 | 270 | IPR052751 | GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
Cre03g0379 | 483 | SMART | serkin_6 | 10 | 269 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre03g0379 | 483 | MobiDBLite | consensus disorder prediction | 402 | 424 | - | - | |
Cre03g0379 | 483 | CDD | STKc_MAPKKK | 8 | 269 | - | - | |
Cre03g0379 | 483 | ProSitePatterns | Protein kinases ATP-binding region signature. | 16 | 39 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre03g0379 | Cre-Chr3:2208967 | Cre09g1042 | Cre-Chr9:10680609 | 2.50E-54 | dispersed | |
Cre03g0379 | Cre-Chr3:2208967 | Cre02g1223 | Cre-Chr2:12211283 | 4.40E-59 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63931 | PF00069 | Pkinase | 5.70E-53 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre03g0379 | - | - | - | 0.0 |