Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0380 ATGTCTGTCTCCGTTGCGGTTTCGAATTCGCCGGGATTTTCTCCTTCGTCTATGTTCTGCAACAAGACGTCGATCATTTCTCCGGCGCCGGAGGCGCTCACGCTTACTTTAGCCCATTTAAAGTCGTCGCAGGCTTCTTCGTCTTGCTCTTCTTCCCCTTCTTCGCCTTCTTCCCCTTTTCGGATTAGGTTTCCCAAGCCCCCTTCTGGGCTTTCGGCGGCAGCGGCAGCGGTGGCGGTGGCTTCCACTTCTTCTCCTTCGTCGTCGTCGTCAAGCGCGATCTTGAAGAGGAAGAGACCGGCTAGGTTGGATATTCCGTTGACGCCATTGAGTTTTGGGGCTCCGGTGATGCCGTCGCCATCGTCCTTCAGGGAGGTGGTGGAGGCCGAGAGAGATGGGTATTCTGTGTATTGTAAGAGAGGGAGGAGGAGAATTGCGATGGAAGATCGCTATTCTGCCGCTGTTGATCTTCGAGGAAATTCCAAAGAGGGGTTTTTTGGTGTATTTGATGGACATGGAGGTGCGAAGGCTGCAGAATTTGCAGCAAATAACTTAGAGAAGAACGTTATGAATGAAATTGAAAGACTGGCTGATAATGAAACTGATTTTGAACAAGCCATTAAACATGGCTACCTCACCACAGATTCTGATTTCCTCAAGGAGGATCAACGTGGTGGTTCATGTTGTGTGACAGCCTTGATCAAGAAAGGCAACCTTGTTATCTCCAACGCCGGTGACTGCCGTGCCGTTCTCAGCAGCCAAGGTGTTGCCGAGGCCATCACCTCCGACCACCGCCCGTCTCGGGAAGATGAAAGGCACAGGATCGAGTCCACGGGTGGATATGTTGATTTGTGCAATGGCATTTGGAGAGTCCAGGGATCTCTAGCTGTAACTAGAGCAATTGGGGATGCTCACCTCAAACAATGGGTGATAGCAGAGCCGGAGACGAGGGCAATTCGGATCGAACCTCGACACGAGTTCTTGATCTTGGCCTCAGACGGTTTATGGGAAACGGTGAGCAATCAAGAAGCAGTGGACATTGCACATCCATTGTGTGTAGGGATTGAGAAGGCAGAGCCATTGATGGCCTGTAAAAAGCTTGTGGAGCTCTCACTTTCAAGAGGTTCAGTTGATGACATTAGTGTAGTACTGATTCAATTGGCTAACTTCATCTAA 1176 50.34 MSVSVAVSNSPGFSPSSMFCNKTSIISPAPEALTLTLAHLKSSQASSSCSSSPSSPSSPFRIRFPKPPSGLSAAAAAVAVASTSSPSSSSSSAILKRKRPARLDIPLTPLSFGAPVMPSPSSFREVVEAERDGYSVYCKRGRRRIAMEDRYSAAVDLRGNSKEGFFGVFDGHGGAKAAEFAANNLEKNVMNEIERLADNETDFEQAIKHGYLTTDSDFLKEDQRGGSCCVTALIKKGNLVISNAGDCRAVLSSQGVAEAITSDHRPSREDERHRIESTGGYVDLCNGIWRVQGSLAVTRAIGDAHLKQWVIAEPETRAIRIEPRHEFLILASDGLWETVSNQEAVDIAHPLCVGIEKAEPLMACKKLVELSLSRGSVDDISVVLIQLANFI 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2228184 2229721 - CrPI670011_03g003800.1 Cre03g0380 492410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0380 391 FunFam probable protein phosphatase 2C 25 126 390 - -
Cre03g0380 391 CDD PP2Cc 133 387 IPR001932 -
Cre03g0380 391 Gene3D - 134 390 IPR036457 -
Cre03g0380 391 ProSitePatterns PPM-type phosphatase domain signature. 165 173 IPR000222 GO:0043169(InterPro)
Cre03g0380 391 SMART PP2C_4 126 385 IPR001932 -
Cre03g0380 391 Pfam Protein phosphatase 2C 138 380 IPR001932 -
Cre03g0380 391 Coils Coil 182 202 - -
Cre03g0380 391 ProSiteProfiles PPM-type phosphatase domain profile. 133 387 IPR001932 -
Cre03g0380 391 PANTHER PROTEIN PHOSPHATASE 121 385 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cre03g0380 391 SMART PP2C_SIG_2 142 387 IPR001932 -
Cre03g0380 391 SUPERFAMILY PP2C-like 133 388 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0380 Cre-Chr3:2228184 Cre07g0784 Cre-Chr7:6471288 1.50E-94 dispersed
Cre03g0380 Cre-Chr3:2228184 Cre07g0608 Cre-Chr7:3891444 1.70E-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0380 K17506 - csv:101207841 663.299