Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0403 ATGGCCAACGACGTCGTTTGCCTTTTCCCCTTCCCCTCTTTCTTCCTCATTCTCATTTTCTCCTATTTCATTTGGTTTCATTTCCTCGCCCGTAAGCTCACCGGTCCGCCCGTATGGCCACTCATCGGCAGCCTTCCGGCTCTCATCTCGAACCGGCGGCGACTCCACGACTGGATGGCCGGCAACCTCCGCGCCACAGGCGGCGCCGCCACTTACCAAACCTGCACGGTGGCGCTTCCATTCATAGCTAAAAAACAAGGATTTTACACGGTCACGTGCCACCCGAGAAACATCGAGCACGTGCTCCGAACCCGGTTCGAAAATTACCCGAAAGGACCGGACTGGCAAGCGGCTTTTCACGATTTATTAGGGCAAGGGATTTTCAACAGCGACGGAGAAATTTGGCTGATTCAACGGAAGACGGCGGCGCTTGAATTCACGACGAGGACTCTCCGGCAGGCAATGGACCGGTGGGTGAATCGGACGATACGGACGCGACTGTGGTGTATATTGGAGAAGGCGGCGGAGTACAAAACGGCGGTGGATTTGCAGGATTTGTTGCTCCGATTAACATTTGATAATATTTGTGGGCTGACTTTTGGGAAAGATCCACAAACTTTATCGCCGGAATTGCCTGCGAATCCGTTTGCTTTGGCATTTGATACCGCCACTGAGGCCACTCTTCAGCGCCTTCTTTACCCTGGTCTTTTATGGAGGTTGGAGAAGCTTCTGGGCATTGGAATGGAAAGAAGGTTGAAGAAGAGTTTGAAAGTAGTAGAAGAATACATAAACGACGCCGTTGCAGCCCGTAAACAATCTCCCTCCGACGACTTATTATCACGTTTCATGAAGAAACGCGACGGCGACCGCTTCTCCGCCGCCGTCCTCCACCGCATCGCATTAAACTTCGTCCTCGCCGGCCGAGACACCTCCTCCGTGGCTCTCACGTGGTTCTTTTGGCTAGTAATGAACCACCCACACGTAGAGGAAAAAATCATCTCCGAAATCTCAACGGTCCTCCGCCAGACACGTGGCGACGACCCACGCCGTTGGATCGAAGAACCGTTGGTATTCGACGAAGCCGACAAATTAGTGTACTTAAAAGCCGCGTTGGCCGAAACGCTGCGTTTATACCCTTCCGTACCGCAGGATTTCAAGTATGTCGTGGCTGATGACGTGTTGCCAGATGGCACTTTTGTGCCAGCTGGTTCAACCGTGACGTATTCGATTTATTCGGTCGGGAGGATGAAGAGCATTTGGGGGGAGGATTGTGCGGAGTTTAAACCGGACCGGTGGTTGTCTCCCGCCGGGGATCGGTTCGAGGGGCCAAAGGATGCCTACAAATTTGTGGCGTTTAATGCTGGACCGAGGACTTGTTTGGGGAAGGATTTGGCTTATTTGCAAATGAAGTCCGTTGCCTCCGCCGTACTCCTCCGGTACCGGCTAGCGCCGGTTCCCGGTCACCGGGTGGAACAGAAAATGTCTCTTACACTTTTTATGAAGAACGGGCTTCGTGTTTATTTGCATCCTCGCCGGCTTGCTTAG 1545 52.94 MANDVVCLFPFPSFFLILIFSYFIWFHFLARKLTGPPVWPLIGSLPALISNRRRLHDWMAGNLRATGGAATYQTCTVALPFIAKKQGFYTVTCHPRNIEHVLRTRFENYPKGPDWQAAFHDLLGQGIFNSDGEIWLIQRKTAALEFTTRTLRQAMDRWVNRTIRTRLWCILEKAAEYKTAVDLQDLLLRLTFDNICGLTFGKDPQTLSPELPANPFALAFDTATEATLQRLLYPGLLWRLEKLLGIGMERRLKKSLKVVEEYINDAVAARKQSPSDDLLSRFMKKRDGDRFSAAVLHRIALNFVLAGRDTSSVALTWFFWLVMNHPHVEEKIISEISTVLRQTRGDDPRRWIEEPLVFDEADKLVYLKAALAETLRLYPSVPQDFKYVVADDVLPDGTFVPAGSTVTYSIYSVGRMKSIWGEDCAEFKPDRWLSPAGDRFEGPKDAYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLAPVPGHRVEQKMSLTLFMKNGLRVYLHPRRLA 514
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 2485801 2488456 - CrPI670011_03g004030.1 Cre03g0403 492433
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0403 514 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g0403 514 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g0403 514 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g0403 514 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g0403 514 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g0403 514 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g0403 514 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g0403 514 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g0403 514 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g0403 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre03g0403 514 PANTHER CYTOCHROME P450 24 504 - -
Cre03g0403 514 FunFam Cytochrome P450 27 514 - -
Cre03g0403 514 Pfam Cytochrome P450 90 501 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g0403 514 Gene3D Cytochrome P450 29 513 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g0403 514 SUPERFAMILY Cytochrome P450 24 511 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre03g0403 514 CDD CYP86A 75 504 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0403 Cre-Chr3:2485801 Cre06g1131 Cre-Chr6:5176425 1.30E-194 dispersed
Cre03g0403 Cre-Chr3:2485801 Cre09g2262 Cre-Chr9:41802119 4.50E-195 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0403 K15401 - csv:101214516 982.63