Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0434 ATGGGGGAGGAGGAAGTGCCCATTTTGAAAACAGAACATTGGCATGAACTTAAGACGCCAGTAGCTGCTAACAAGAAGGATGTTTCTATTCCCAATTCCCCAGGGTCAGAAGCAAAATGTTGCAGTTCTGGCTGTGCTTTTTCCAGATTGGAACACAGTAATTTGGAGTCATTAAAACGTTCTAAATCAGCTATGAAGCTTGGTGGATTGATATTGTTTTATACCATAGCTATGGCAGTAGAGACTATTGGTGGTTTGAGAGCTAACAGTCTAGCTGTAATGACAGATGCAGCCCACTTGCTTAGTGATGTTGCTGGTTTCTCTGTTTCCCTCTTTGCAGTTTGCGTTTCGGGCTGGGAGGCAACACTGCAACACTCATTCGGGTATTACCGTCTTGAAGTTTTAGGTGCCCTTGTGTCTGTTCAGCTTATATGGCTGATTTCTGGGGTCTTAATCTACGAGGCGATCGACCGGATTCTTAGCCAAAAGACTAAGGTGGATGGTTTCCTTATGTTTGCCATTGCAGCTTTTGGATTCATTCTTAACTTGTTTATGGTCATGTGGCTTAGCCATAGCCACCACTCTCATTCATCTCATTGTTGTCATCATCATCATGATCATCACTCTCACTCTCATCAGAATCACTTGGATCATGAACCTGACCATAAGGAGGAGGAGATTTTCACAGCAACCAAACAAGAGGGTGCTTCTTTGGGGTCAAAGGACAATAGTTCAATGTTGAACATAAATCTCCAAGGTGCTTATCTTCATGTCATTACTGATATGATTCAATCTATTGGTGTGATGATTTCTGGAGTCATTCTATGGTTTAAACCCGACTGGATCGTCGTCGATTTAATCTGCACTCTTGTATTTTCTGTTCTTGCTTTAGCTACTACTTTCTCTATGCTTAGACGTATAGCTGGTATATTAATGGAAGGAACACCTAGGGAGATCAATATTGAGAGCCTGGAAAATGAGCTCAAGGACATAAAAGGAGTCCATTATTTGCATGACTTGCACATTTGGTCCATAACGGCCGGAAAAGTCGTGTTGTCGTGCCATGTTGTCGCCGAAGCCGGAGTTTGTTCTAGGGAGCTAATTTTGAAGATTAGAAGCCTTTGTGAAGACAGATACAATATAATTCATACTACCATACAAGTTGAGTAG 1170 41.97 MGEEEVPILKTEHWHELKTPVAANKKDVSIPNSPGSEAKCCSSGCAFSRLEHSNLESLKRSKSAMKLGGLILFYTIAMAVETIGGLRANSLAVMTDAAHLLSDVAGFSVSLFAVCVSGWEATLQHSFGYYRLEVLGALVSVQLIWLISGVLIYEAIDRILSQKTKVDGFLMFAIAAFGFILNLFMVMWLSHSHHSHSSHCCHHHHDHHSHSHQNHLDHEPDHKEEEIFTATKQEGASLGSKDNSSMLNINLQGAYLHVITDMIQSIGVMISGVILWFKPDWIVVDLICTLVFSVLALATTFSMLRRIAGILMEGTPREINIESLENELKDIKGVHYLHDLHIWSITAGKVVLSCHVVAEAGVCSRELILKIRSLCEDRYNIIHTTIQVE 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2754731 2755900 - CrPI670011_03g004340.1 Cre03g0434 492464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0434 389 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 32 389 IPR050681 GO:0005385(PANTHER)|GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0071577(PANTHER)
Cre03g0434 389 NCBIfam cation diffusion facilitator family transporter 71 389 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre03g0434 389 SUPERFAMILY Cation efflux protein transmembrane domain-like 68 313 IPR027469 -
Cre03g0434 389 Gene3D Cation efflux protein transmembrane domain 67 311 IPR027469 -
Cre03g0434 389 Pfam Cation efflux family 71 312 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre03g0434 389 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 318 389 IPR036837 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0434 Cre-Chr3:2754731 Cre06g0863 Cre-Chr6:1932335 1.40E-68 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0434 K14689 - csv:116403740 607.446