Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0435 ATGCGTGTCAAAAAGGAAGTCTCTCTCTTGTCGCGCTGCTCCAATCTTATTGGGCCACGTTTCCACCACCTCCCCAAACTAATTCTACGCGTGTCCTCTTCTGATCAACCCACCCCTTCTCAATCAACGGCTCAGATCTTTCCATTCACTACGTCACGCACTTTACTACCTCTTCGATCTGCCCGTCTCTCCCCGGGTAGCTACCCTTGCCGTCGCCGTCGTCGTCGTCGTCGGCTTATTTCGGAGATTGAAGTAATCAACTGCGGCTGGGGTAGGGGGGAGGGGAGATTAAAGAACTTAGTAATGGCGGAGATTTGCTGTAAAGTGATGAGTGAGAGTGAGGCGTCGTCGTCCTGCGAGCCGAGCTCGCGAGTGGCTAGACGTCGGAGAATGGAGATCAGGAGGTGTAAATTTGTCGCCGGAGTTGCTCCGTCGGAGACTGAGACTGTTGCGAAGAGGCAGAAGCTGGAGGATCGAGCTACGTCAATATCCAGAGACTGTGATAACGCAGTCCAGAATTGTGATTCGGGAGAAGAAGAAACGGTCGGGAGATTTGTGGCCGGAGAGGTTTCGACGAAGGAGGTATCAACTCCTCTGTCTAGGGAATCTCCCTCTGGCGAAGTGATTCCGAAGTTCGGATTCTCTTCTGTTTGTGGAAGGCGGAGAGATATGGAGGATGCGGTGGCGGTTCATCCATCGCTTTGTTTGACAGACAAGAAAGCCACCGATATGTTGCACTTCTTCGGTGTTTACGATGGCCATGGCTGCTCTCATGTGGCGATGAGGTGCAAGGAGCGGCTGCATGAACTGGTAAAAGATGAGTTGGATAGAGAAGAGAAGGAAGACGCCGCTGCTGCGGCAGAGGCGGAGGCGGAGGCGTCGCGGTGGGACCGTGCTATGAAGAGAATCTTCTGGCGAATGGACAACGAAGTTGTGGCGCGAAACAATGAAGAAGTTGTGGTTGCGAACTGTAGATGCGAGCTTCAGTCGCCGGATTGCGATGCCGTCGGATCTACCGCCGTCGTCGCAATTGTGACGCCGGATAAGATCATCGTCGCCAACTGCGGCGATTCCAGAGCCGTTCTCTGCCGTAACGGGAAGGCCATCCCTCTCTCCTCCGATCATAAGCCGGATCGTCCCGACGAACTTAGCCGGATCGAGGAAGCCGGTGGGCGAGTGATTTACTGGGACGGACCGCGAGTTCTCGGAGTTCTCGCCATGTCAAGAGCCATAGGCGATAATTATTTAAAACCGTATGTGATATCGGAGCCGGAGGTGACAATAACGAATCGGACGGTGGAGGATGAGTGCTTGATTCTAGCGAGCGACGGGCTGTGGGATGTGGTGCCGAACGAGACGGCGTGTGGAGTGGCGAGCATGTGCCTTAGGGGGAAGACGGAGGAGAGGTCTCCGGTGTCACCGTCGGGGGAGGCGGAGACGGCGGCGGAAGGGGAGGAGCGAGGGAGCGCAGACAAGGCCTGCAACGATGCGTCGATGCTGCTGACGAAGCTGGCGTTGGCCAGGCACAGTACGGACAACGTGAGCGTCGTGGTGGTGGACCTTAAGAGGGACACGTACCCTTAG 1584 55.74 MRVKKEVSLLSRCSNLIGPRFHHLPKLILRVSSSDQPTPSQSTAQIFPFTTSRTLLPLRSARLSPGSYPCRRRRRRRRLISEIEVINCGWGRGEGRLKNLVMAEICCKVMSESEASSSCEPSSRVARRRRMEIRRCKFVAGVAPSETETVAKRQKLEDRATSISRDCDNAVQNCDSGEEETVGRFVAGEVSTKEVSTPLSRESPSGEVIPKFGFSSVCGRRRDMEDAVAVHPSLCLTDKKATDMLHFFGVYDGHGCSHVAMRCKERLHELVKDELDREEKEDAAAAAEAEAEASRWDRAMKRIFWRMDNEVVARNNEEVVVANCRCELQSPDCDAVGSTAVVAIVTPDKIIVANCGDSRAVLCRNGKAIPLSSDHKPDRPDELSRIEEAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTITNRTVEDECLILASDGLWDVVPNETACGVASMCLRGKTEERSPVSPSGEAETAAEGEERGSADKACNDASMLLTKLALARHSTDNVSVVVVDLKRDTYP 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2773531 2775586 + CrPI670011_03g004350.1 Cre03g0435 492465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0435 527 Coils Coil 261 292 - -
Cre03g0435 527 SUPERFAMILY PP2C-like 204 522 IPR036457 -
Cre03g0435 527 ProSitePatterns PPM-type phosphatase domain signature. 247 255 IPR000222 GO:0043169(InterPro)
Cre03g0435 527 ProSiteProfiles PPM-type phosphatase domain profile. 211 521 IPR001932 -
Cre03g0435 527 Coils Coil 153 173 - -
Cre03g0435 527 FunFam Protein phosphatase 2C 50 209 525 - -
Cre03g0435 527 SMART PP2C_4 201 519 IPR001932 -
Cre03g0435 527 Pfam Protein phosphatase 2C 212 470 IPR001932 -
Cre03g0435 527 Gene3D - 205 525 IPR036457 -
Cre03g0435 527 MobiDBLite consensus disorder prediction 466 491 - -
Cre03g0435 527 PANTHER PROTEIN PHOSPHATASE 173 520 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cre03g0435 527 CDD PP2Cc 211 521 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0435 Cre-Chr3:2773531 Cre05g1069 Cre-Chr5:9954650 7.10E-63 dispersed
Cre03g1884 Cre-Chr3:35782574 Cre03g0435 Cre-Chr3:2773531 1.30E-66 transposed
Cre05g0943 Cre-Chr5:8617406 Cre03g0435 Cre-Chr3:2773531 6.00E-77 transposed
Cre07g0419 Cre-Chr7:1859284 Cre03g0435 Cre-Chr3:2773531 5.10E-15 transposed
Cre07g0784 Cre-Chr7:6471288 Cre03g0435 Cre-Chr3:2773531 2.60E-30 transposed
Cre07g1746 Cre-Chr7:32925935 Cre03g0435 Cre-Chr3:2773531 1.00E-64 transposed
Cre08g0939 Cre-Chr8:22579871 Cre03g0435 Cre-Chr3:2773531 3.60E-64 transposed
Cre09g0017 Cre-Chr9:475703 Cre03g0435 Cre-Chr3:2773531 4.90E-25 transposed
Cre11g1147 Cre-Chr11:9076453 Cre03g0435 Cre-Chr3:2773531 2.80E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0435 K14497 - csv:101206871 714.146