Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0477 ATGGCGAAAACCCTAATTTCATCTTCACCCTTCGTCGGTTCTTCTCTCCCATCTCTCTCTCGCCATGCTCGTCTCCACACTCTTCCTCACCGGAGACACGTCGCCACCAGAGTCAATTTCAGCTTCCATCAACTTCCCCCCATTCATACCTTTGATTCTGCCTTCGATTTTCAAGCAATTGTTAGCAGAGCTGAAGGCCTGCTCTATACACTTGCTGACGCAGCGGTTGCGGTGGATTCCACTGTTTCAGGTGGCGCCGCATCCACTTCCGCTGATACCGCGGTGCAGAAGAATGGCGGATGGTTTGGATTTATCTCCGAGGCCATGGAAGTGGTTCTTAAAGTGTTGAAGGATGGACTTGCGGCTGTGCACGTCCCATATTCATATGGATTTGCAATTATTTTACTTACTGTTATCGTTAAAGTTGCAACTTTTCCCCTCACTAAGCAGCAGGTTGAGTCAACATTGGCTATGCAAAATCTTCAACCGAAGATTAAAGCCATCCAACAAAGATATGCAGGCAATCAGGAAAGAATACAACTTGAGACATCACGAGTTTATAGACAAGCAGGAGTTAATCCTTTGGCAGGTTGTTTCCCAACTTTAGCCACCATACCTGTCTGGATTGGCCTTTATCAGGCCCTTTCTAATGTGGCAAATGAGGGATTATTGACTGAAGGTTTCTTTTGGATCCCCTCTCTTGGTGGTCCAACTACTATTGCTGCTCGACAAAGTGGATCTGGAATTTCTTGGTTGTTTCCTTTTGTGGATGGCCATCCACCATTGGGCTGGTCTGACACTGCAGCATACCTTGTATTACCTGTTCTCCTCGTCATATCTCAGTATGTATCGATGGAACTCATGAAGCCTCCCCAGACTGATGATCCAGCACAAAAGAACACACTCCTTATTTTCAAGTTTCTTCCCCTCATGATCGGTTACTTCTCCTTGTCTGTTCCATCAGGATTATCAATTTACTGGTTCACAAACAATGTTCTCAGCACGGCTCAGCAAGTATGGTTACGCAAATTAGGAGGTGCAAAGCCTGTTGTAAGTGAGGATGCTGCTGGAATCATAACAGCTGGACGTGCCAAACGAACGTCTGAATCAGGAAGAAACGGTGACAGGTTTAGGCAGTTAAGGGAAGATGAGAAGAAGAATAAGTTAAGCAAGGCAGCTCGATCAGAAGAGATTCAAACTTTGGCTTCTGAGTCTGATAATGAGGATGGGTATGATAGGGAGACAATTGAGAAGGGTGAGGACAGTCTAGAAGAGGCATATGCATCAAGTGCAGACAAAGACATCCCAGCCTATAATCGACAAAAGAGAAGCAAACGATCAAAGAGGAAACGTGCAGGAGGCTTAGCCTCTTCTTTAATTGGTGGTTTACTGTTTTGTGAGAAGTACATATCGATATCTAACGTCCTTCTGATTTGTTGTGGTTTGACACGCCTTAACGATCACGATGTTTCTGAATTTACCGACACGGCTTACTTGTCTAAGAAGGTGAGAAATATGGTGCATGAAAGGGCCGATGATTCCCCTCTGGATTCGGCACTGATGGCTTTTTATAAACTCTCTTCTCTATTCCCTGCTTTCAATCATCATAGCAATGAACTCACTTTCAGGAGTTCATTTACCTTTGAAACTAGTGCAACATGGATGTACCTTGAGTTGGAGCTCCAATGA 1689 44.76 MAKTLISSSPFVGSSLPSLSRHARLHTLPHRRHVATRVNFSFHQLPPIHTFDSAFDFQAIVSRAEGLLYTLADAAVAVDSTVSGGAASTSADTAVQKNGGWFGFISEAMEVVLKVLKDGLAAVHVPYSYGFAIILLTVIVKVATFPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRVYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWSDTAAYLVLPVLLVISQYVSMELMKPPQTDDPAQKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVSEDAAGIITAGRAKRTSESGRNGDRFRQLREDEKKNKLSKAARSEEIQTLASESDNEDGYDRETIEKGEDSLEEAYASSADKDIPAYNRQKRSKRSKRKRAGGLASSLIGGLLFCEKYISISNVLLICCGLTRLNDHDVSEFTDTAYLSKKVRNMVHERADDSPLDSALMAFYKLSSLFPAFNHHSNELTFRSSFTFETSATWMYLELELQ 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3202923 3210449 + CrPI670011_03g004770.1 Cre03g0477 492507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0477 562 MobiDBLite consensus disorder prediction 361 413 - -
Cre03g0477 562 MobiDBLite consensus disorder prediction 368 393 - -
Cre03g0477 562 Pfam 60Kd inner membrane protein 129 343 IPR028055 -
Cre03g0477 562 PANTHER OXA1 31 386 IPR001708 GO:0009535(PANTHER)|GO:0010027(PANTHER)|GO:0016020(InterPro)|GO:0032977(PANTHER)|GO:0032977(InterPro)|GO:0051205(PANTHER)|GO:0072598(PANTHER)
Cre03g0477 562 CDD 5TM_YidC_Alb3 130 343 IPR047196 -
Cre03g0477 562 NCBIfam membrane protein insertase YidC 128 342 IPR028055 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0477 Cre-Chr3:3202923 Cre08g1688 Cre-Chr8:29289022 5.20E-120 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0477 K03217 - csv:101217620 793.112