Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0524 ATGGGTTGCTTTCGTTGTACCGGTTCATCCAGCAAGAAATCGGAGAACAACGAAGAAAACAACCCCCATACCTTCAATTCCAAAACCCACAAGCCCGTTGATCGAACGCCTTCAGATAAAGCCAAAGTAAATTCAAGTTTGGCAGTGAAGAGGGATTCTGATGTGAAGGTGGTTGTGACAAAAGATGACCAATTGGCTTTAGATGTAAAGAAATTGAATTTAAAAGATGAGGTTTCTGAGGAAGGAGAATCCAATGGCCGTGCCAAGACTTTTACGTTTGAAGAACTCGCTGCTGCGACGGGCAATTTCAGGTCAGATTGCTTCTTGGGTGAAGGAGGATTTGGCAAAGTTTACAAGGGGTACTTGCAGAAAGTTAATGAGGTTGTAGCAATCAAACAACTTGACCGCAATGGACTTCAAGGAATTCGAGAGTTTGTTGTCGAAGTCTTGACTTTAAGTCTAGCTGATCATCCTAACCTTGTAAAACTTATTGGCTTTTGTGCTGAGGGGGATCAGAGGTTGTTGGTTTATGAATATATGCCATTGGGATCATTGGAAAACCATTTACACGATCTTCGACCCGGTGCAAAAGTAATTGATTGGAACACAAGAATGAAAATAGCAGCAGGTGCAGCGAGGGGGTTGGAGTATTTGCATGAGAAGATGAAGCCTCCGGTTATATATCGTGATCTGAAATGTTCAAACATTTTGCTCGGTGAAGGATATCATCCGAAGCTATCTGATTTCGGATTGGCTAAAGTAGGTCCTAGTGGGGATAAAACCCACGTTTCAACCAGGGTTATGGGCACATATGGGTATTGTGCTCCAGATTATGCAATGACGGGCCAACTGACATTCAAATCAGATATTTACAGCTTTGGCGTTGTTTTATTGGAACTCATCACGGGCAGGAAAGCAATCGATCATTCAAAACCTCATTCAGAGCAAAATCTTGTGGCTTGGGCGCGACCTTTGTTCCGAGACCGGAAGAAGTTCTCACAAATGGTTGATCCATTGCTCCAAGGACAATATCCAGTGAGAGGATTATACCAATCTCTAGCCATAGCCGCAATGTGTGTTCAGGAGCAACCGAATATGCGGCCAGTTATATCTGATGTGGTAACCGCCTTAAACTACCTTGCTTCCCAGAAATATGATCCCCAATCTCAACCAAACCATAGCTCCCAAAAGAGACCATCTTCTCTTAAAGTGGAACGGAATGATGATAAGAGGGAACGGGACGATGATAAGAGGGAAACTTCAGACAACGAGGGCTGA 1278 43.58 MGCFRCTGSSSKKSENNEENNPHTFNSKTHKPVDRTPSDKAKVNSSLAVKRDSDVKVVVTKDDQLALDVKKLNLKDEVSEEGESNGRAKTFTFEELAAATGNFRSDCFLGEGGFGKVYKGYLQKVNEVVAIKQLDRNGLQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPLGSLENHLHDLRPGAKVIDWNTRMKIAAGAARGLEYLHEKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHSKPHSEQNLVAWARPLFRDRKKFSQMVDPLLQGQYPVRGLYQSLAIAAMCVQEQPNMRPVISDVVTALNYLASQKYDPQSQPNHSSQKRPSSLKVERNDDKRERDDDKRETSDNEG 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3834706 3837661 + CrPI670011_03g005240.1 Cre03g0524 492554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0524 425 Gene3D Phosphorylase Kinase; domain 1 71 179 - -
Cre03g0524 425 SMART serkin_6 103 380 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0524 425 MobiDBLite consensus disorder prediction 384 398 - -
Cre03g0524 425 FunFam Serine/threonine-protein kinase PBS1 180 396 - -
Cre03g0524 425 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524(InterPro)
Cre03g0524 425 Pfam Protein kinase domain 108 320 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0524 425 MobiDBLite consensus disorder prediction 399 425 - -
Cre03g0524 425 CDD STKc_IRAK 109 378 - -
Cre03g0524 425 PANTHER OS07G0668900 PROTEIN 21 403 - -
Cre03g0524 425 MobiDBLite consensus disorder prediction 1 45 - -
Cre03g0524 425 ProSiteProfiles Protein kinase domain profile. 103 380 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0524 425 Gene3D Transferase(Phosphotransferase) domain 1 180 408 - -
Cre03g0524 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0524 425 MobiDBLite consensus disorder prediction 16 38 - -
Cre03g0524 425 MobiDBLite consensus disorder prediction 384 425 - -
Cre03g0524 425 SUPERFAMILY Protein kinase-like (PK-like) 89 397 IPR011009 -
Cre03g0524 425 FunFam probable serine/threonine-protein kinase RLCKVII 75 179 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0524 Cre-Chr3:3834706 Cre10g2179 Cre-Chr10:36331013 3.00E-144 dispersed
Cre02g2377 Cre-Chr2:37166934 Cre03g0524 Cre-Chr3:3834706 4.90E-151 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63936 PF00069 Pkinase 5.50E-44 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0524 - - - 0.0