Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0540 ATGGCGGCTGCAGCCGGTGGCAAGTCGCTCGAGCAAACGCCGACGTGGGCCGTTGCGGTTGTTTGCTTCGTTTTGCTTCTCATCTCTATTTTCATCGAGTATAGCCTCCATCTCATCGGACATTGGCTGAAGAAGAGACACAAACGGGCGTTATTTGAAGCACTAGAGAAGATCAAATCAGAGCTTATGTTATTGGGATTCATATCACTGCTTCTAACAGTGGGGCAAGGTCCAATCACAGAGATATGTATCCCTCAACATGTAGCTGCCACGTGGCATCCATGTACAAAGGAGAAAGAAAGTGAGATGAACAAAATGGGGGATCAATCTGTGCAACATTTGTCTACTAATGGCCGGAGACTCCTCCATCTCGCCGGAAATGGTGGAAGTTTCCGGCGGATTTTGGCCGCGCCCGGAGGAGCCGACAAGTGTGCTGCCAAGGGTCAAGTGTCATTTATTTCAGCAGAAGGAATTCATCAACTTCATATCTTCATATTTGTGTTGGCTGTTTTCCATGTTTTGTACTGTGTTCTTACTTATGCTTTGGCTAGAGCAAAGATGAGGAGTTGGAAAACATGGGAAAAAGAGACCAAAACTGCAGAATACCAATTCTCACATGATCCGGAGAGATTCAGGTTTGCAAGAGACACCTCGTTTGGGAGAAGACATTTGAGCTTCTGGACAAAGAATCCAGCCCTAATGTGGATAGTTTGTTTCTTCAGGCAATTTGTAAGATCTGTTCCAAAAGTTGATTACTTGACATTAAGACATGGGTTTATAATGGCACATTTAGCACCTCAAAGTCATACACAATTTGATTTTCAAAAATACATTAATCGATCTCTTGAGGAGGACTTCAAAGTTGTTGTGGGAATCAGCCCACCAATTTGGTTCTTCGCTGTGCTGTTTCTCCTCTCAAACACTCACGGTTGGAGGGCATATCTATGGCTGCCATTCATCCCACTAATCATTTTGCTGCTGATCGGGACAAAGTTGCAAGTGATCATAACGAAAATGGCACTAAGAATACAAGAAAGAGGAGAAGTAGTGAAGGGCGTGCCAGTGGTTGAGCCTGGCGATGACCTTTTTTGGTTCAATCGCCCTCGCCTTATTCTTTATCTCATCAACTTTGTTCTCTTTCAAAATGCCTTCCAAGTTGCCTTCTTTGCTTGGACTTGGTATGAGTTCGGGTTGAATTCTTGTTTCCATGAGCATACAGAGGATGTGGTGATCCGAATTTCAATGGGGGTGATTGTACAAATCCTTTGCAGTTATGTTACTCTTCCTCTTTATGCACTGGTCACTCAGATGGGTTCAACAATGAAGCCAACTATATTCAATGAGAGAGTGGCAGCGGCCCTTCGCAATTGGTACCACTCGGCTCGGAAGCACATCAAACACAACCGCGGTTCAATCACTCCAATGTCGAGCCGACCCGCCACCCCGACTCACAGCATGTCACCGGTCCACCTTCTCCGTCACTACAGGAGTGAGGTCGATAGCTTCCACACCTCGCCGAGAAGGTCACCATTTGACACTGATCGTTGGGACAACGATTCGCCCTCACCGTCCCGTCATGCTGATGGTTCGTCTTCATCACAACCCCACATCGAGATGGGAGGCTATGACAAAGATCCGACCGAACCGGGGTCGACTCAAATTGACCCGGTTCAATCATCTCAAACCCGGACTCAACATGAGATTCAAATTGGCGGCCCCAAAGACTTTTCCTTCAATAGAGTAGAGTGA 1749 46.31 MAAAAGGKSLEQTPTWAVAVVCFVLLLISIFIEYSLHLIGHWLKKRHKRALFEALEKIKSELMLLGFISLLLTVGQGPITEICIPQHVAATWHPCTKEKESEMNKMGDQSVQHLSTNGRRLLHLAGNGGSFRRILAAPGGADKCAAKGQVSFISAEGIHQLHIFIFVLAVFHVLYCVLTYALARAKMRSWKTWEKETKTAEYQFSHDPERFRFARDTSFGRRHLSFWTKNPALMWIVCFFRQFVRSVPKVDYLTLRHGFIMAHLAPQSHTQFDFQKYINRSLEEDFKVVVGISPPIWFFAVLFLLSNTHGWRAYLWLPFIPLIILLLIGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQVAFFAWTWYEFGLNSCFHEHTEDVVIRISMGVIVQILCSYVTLPLYALVTQMGSTMKPTIFNERVAAALRNWYHSARKHIKHNRGSITPMSSRPATPTHSMSPVHLLRHYRSEVDSFHTSPRRSPFDTDRWDNDSPSPSRHADGSSSSQPHIEMGGYDKDPTEPGSTQIDPVQSSQTRTQHEIQIGGPKDFSFNRVE 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4067205 4076118 - CrPI670011_03g005400.1 Cre03g0540 492570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0540 582 Pfam Mlo family 8 495 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cre03g0540 582 MobiDBLite consensus disorder prediction 551 568 - -
Cre03g0540 582 MobiDBLite consensus disorder prediction 499 582 - -
Cre03g0540 582 MobiDBLite consensus disorder prediction 523 537 - -
Cre03g0540 582 MobiDBLite consensus disorder prediction 499 522 - -
Cre03g0540 582 PANTHER MLO-LIKE PROTEIN 1 3 529 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0540 Cre-Chr3:4067205 Cre04g1720 Cre-Chr4:35340647 1.50E-143 dispersed
Cre03g0540 Cre-Chr3:4067205 Cre03g0542 Cre-Chr3:4115674 5.70E-130 proximal
Cre02g0375 Cre-Chr2:923095 Cre03g0540 Cre-Chr3:4067205 6.60E-64 transposed
Cre05g2268 Cre-Chr5:34256938 Cre03g0540 Cre-Chr3:4067205 4.80E-190 transposed
Cre02g2410 Cre-Chr2:37492918 Cre03g0540 Cre-Chr3:4067205 2.60E-256 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0540 K08472 - csv:101217225 1101.27