Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0561 ATGATTGTAGCAGCAGGGTCGAGCTCCAATGGCGGAATTGGGAGCGGAGAATTGGCCAATTTTGTCCGGCAAGTGGTGGTGGGGCGGTGGTTTTCTCTTTTTGCTTCGTTCCTTGTAATGACCGGCGCCGGCGGAGTTTATTTGTTCGCTTATTACTCTAGAGACATCAAAAAGACGCTCCAATGTGATCAAACGACACTAAACAAAATTGGGTTTTACAAAGATTTGGGATCCAACGTCGGCGTTATTGCCGGACTTCTGGCGGAGGTGGCGCCAACTTGGCTTGTTCTTCTCATCGGCGCCGCCTTCAATTTTCTTGGCTACTTTAAGATATGGCAAGCCGTCACCGGAAAAATTGTTCAGCCCACCGTCGCCTTCTTTTGCTTTTACATTATGGTTGGAGCTAACTCTCAGAATTTTGCCAATACAGGAGTGCTTGTCACGTGCGTGAAGAACTTTCCAGAAAGAAGAGGAGTGATGTTGGGCCTTCTAAAGGGCTTTGTGGGCCTGAGCGGAGCTATCATGACCCAACTTTACATTGCGATTTACGGCCACGATACCAAATCTCTTGTTCTTCTAATCGCCTGGTTTCCTTCTATAATCTCTTTGATCTTCGTCTACACAATCAGAGAAATCAAAGCCGTAAAACACCCAAATGAATTTAGAGTTTTCGTTCAATTCCTTTGCGTCACAGTCCTTTTAGCCATCTTCCTCACCGTCTTAATCTTCGTTCAAAAACGAGTCCGATTCCATCAATCAGCTCACATCGCCATTGTCTCTGCCATTCTTGCTCTGCTTTTTGTTCCATTGTTAATCGCCATTAGAGAAGAACTCCTTCTCTGGAATCTCAATAAACGAACCATTCCTACAAACCCTTTCACCAGAATTAGAATCGAAAACAACCCCCAGACAACAACAACCCCAATTCCTTCTTCAAATCAAACTCAATTCAGTTCTTGTTTCGCTAACATTTTCAACAAACCCGAAAGAGGCGAAGATTACACAGTTCTTCAAGCGATTTTCAGTATCGATATGCTTATTTTATGTTCCACTATGTTAATTGGCGTCGGTGCAAGCTTAACCGCCATTGACAATCTAGGGCAAATCGGTGAATCCCAAGGCTACCCATCTGAAACAATCAACTCATTCATCTCTTTAGTAAGTATTTTCAACTTCACTGGTAGAATCTTTTCTGGGTTCGTCTCGGAAATCTTGCTTGAGAAATTCAAATTCCCTAGGCCATTGATGCTCACACTCATCCTCTTGATTTCCTGTATTGGGCATCTTTTGGTAGCCTTTCCCTTTGAGGATTCGCTCTACGTTGCTTCAATCATAATTGGATTTTCAATGGGGTCTCAAGTTCCATTGCATTTCGCGATGATTTCAGAGATTTTTGGGCTGAAACATTACTCGACTTTGTTTAATTTTGGGCAATTGTCTTGTCCAATTGGGTCTTATATTCTGAATGTAATGGTGACTGGGCAGATGTATGATAAGGTAGCGCAAGTGGGGAGTAATCCAAACAAGTTTCATTGTGCAGGAAGTCATTGTTATGAACAATCGTTTTTGATTTTGGGTGGATTAACGTTTATTGTAGCGATGATGTCGTTGATTTTGGTGATGAGGACGAGGGATTTTTATAGAGGGGATATATACAAGAAATTCAGGGAAGATATGGAATCTTTGAAGACGGAAGTCGAGTTTTACAAAGTGGATGAGAAGAGGACTAGGATTGGGAATTTACTTGTTGATAAACATACCATCAATTTCAAGAGGTGA 1779 42.21 MIVAAGSSSNGGIGSGELANFVRQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKKTLQCDQTTLNKIGFYKDLGSNVGVIAGLLAEVAPTWLVLLIGAAFNFLGYFKIWQAVTGKIVQPTVAFFCFYIMVGANSQNFANTGVLVTCVKNFPERRGVMLGLLKGFVGLSGAIMTQLYIAIYGHDTKSLVLLIAWFPSIISLIFVYTIREIKAVKHPNEFRVFVQFLCVTVLLAIFLTVLIFVQKRVRFHQSAHIAIVSAILALLFVPLLIAIREELLLWNLNKRTIPTNPFTRIRIENNPQTTTTPIPSSNQTQFSSCFANIFNKPERGEDYTVLQAIFSIDMLILCSTMLIGVGASLTAIDNLGQIGESQGYPSETINSFISLVSIFNFTGRIFSGFVSEILLEKFKFPRPLMLTLILLISCIGHLLVAFPFEDSLYVASIIIGFSMGSQVPLHFAMISEIFGLKHYSTLFNFGQLSCPIGSYILNVMVTGQMYDKVAQVGSNPNKFHCAGSHCYEQSFLILGGLTFIVAMMSLILVMRTRDFYRGDIYKKFREDMESLKTEVEFYKVDEKRTRIGNLLVDKHTINFKR 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4357386 4359488 - CrPI670011_03g005610.1 Cre03g0561 492591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0561 592 Pfam Major Facilitator Superfamily 348 544 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cre03g0561 592 CDD MFS_Mch1p_like 28 533 - -
Cre03g0561 592 SUPERFAMILY MFS general substrate transporter 33 270 IPR036259 -
Cre03g0561 592 SUPERFAMILY MFS general substrate transporter 246 545 IPR036259 -
Cre03g0561 592 Gene3D MFS general substrate transporter like domains 318 546 IPR036259 -
Cre03g0561 592 Coils Coil 552 572 - -
Cre03g0561 592 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 556 - GO:0016020(PANTHER)
Cre03g0561 592 Pfam Nodulin-like 29 274 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0561 Cre-Chr3:4357386 Cre03g0574 Cre-Chr3:4425006 7.00E-176 dispersed
Cre03g0561 Cre-Chr3:4357386 Cre03g0563 Cre-Chr3:4367703 1.50E-207 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0561 - - - 0.0