Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0569 ATGGCCGACAACTTTCTCCCCGAAACCTGCCGTTTCCTCAAACAACTTGGAGAAGGACGATGGTTTTCAGTATTCGCTTCTTTTCTAATCATGATCGGCGCAGGTTCAACTTACGTTTTCGGAACATACTCCAAAGTATTGAAAACCCAATTCGATTATAATCAAACCCAAATCAACACATTGGGATTTGCCAAAGATCTCGGCTCCAACCTCGGTGTTTTCGCCGGCCTTCTCGGCGAGGTGGCTCCGCCGTGGGTTCTGTTCATCGTCGGTTCATCTCTCAATTTCTACAGCTACTTCATGATTTGGCTCTCCATCACTCGCCGTATTGCCAAACCCAGTTTATGGAAAATGTTCTTCTACATTTCCTTAGCTGCCAATTCACAAAATTTCGCTAATACAGCCGTTTTAGTAACCAGCGTCAGGAATTTCCCTGATCGACGGGGAATTATTCTCGGACTTCTCAAAGGCTTTGTCGGAATCGGAGGTGCCATTTTAACTCAATTCTATTTAGCCATTTACGGCCATGAAAATCCAGCTAGTTTGGTTCTTCTTCTTTCATGGTTCCCCACTTTTGTTTCTTTGGTATTTTGTCTCGTGATTCGAACAATCAATATCCGTAAACATCCTGAAGAACTCAGAGTTCTTTACCATTTGCTTTATGTCTCAGTAATTCTTGCTCTGTTTCTCTTATTTCTAACCATTACCCAAAAACAAGCTGAGTTTTCTTCAGCTGGGTATATAAGTGGAGCTGCCGTCATTGTTGGATTACTATCTATTCCTCTTTTAATCGCCATTAGAGAAGAACTCATTCTCTTCAAACTCAACAAACAAACCAACAAAAATCAACCCACCCCTGTTTTCGTTCCTGAACAAAAACCTTCATCAAATCCCCCACCTACCAACAATGATTCCTTAACCCCACTTGAGGAAATTTCAGAAACTGATTCGCCATCATGTTTCTCAAACATACTCAACAAACCAGAAAGAGGATCAGATTACACCATTTTACAAGCTCTGTTCAGCAAAGACATGGCGCTTGTTTTCGTAGGAACACTTTGTGGGTGTGGTTCATCACTTGCTGCCATTGACAACATAGGCCAAATTGGTGAATCACTTGGCTATCCATCTCAATCCATAAGCATCTTCGTTTCATGGGTTTCTATATTCAATTTCTTCGGCAGAGTAGGGTCTGGCTTCATCTCTGAAACTCTCATGACAAAATACAAATTACCTCGTCCTTTAATGTTCGCTTTCTCCCATCTTCTAACCTGCATTGGCATGCTCTTCATTGCCTTCCCATATTCCGGCTCAATCTACATAGCTTCATTGATCATCGGGTTCGGATTCGGAGCTCAAGTTCCGATGGTTTTCGCCATAATTTCGGAACTTTTCGGTCTGAAATATTACGCAACCATCTTCAATTGTGCACAATTGGCAGTCCCCATTGGATCCTATGTACTAAATGTGGATGTAATTGGGAGATTATATGATATTGAAGCCATAAAAGATGGGGGAATTAAGAATGGGAAAGGACTAACTTGCCATGGAATTCATTGTTTTAGTGGGTCATTCTTGATTTTGGCTGTGGTGGTGTTGATTGGAGCTTTGGCTTCGCTTGTGTTGGCTTTCAGGACGAGAGATTTTTACAGAGGGGATGTTTATAAGAAGTATAAAGAGGATATGTGGATTCCTCAATCGGATATGGAGTTTTATTGTTTAGATAACAAGAAGAAAGTTGATAACAATGTGCAGCGGATTGTCATGCCGCCTAAATATAGTTTTCTCAATATAATATAG 1800 41.11 MADNFLPETCRFLKQLGEGRWFSVFASFLIMIGAGSTYVFGTYSKVLKTQFDYNQTQINTLGFAKDLGSNLGVFAGLLGEVAPPWVLFIVGSSLNFYSYFMIWLSITRRIAKPSLWKMFFYISLAANSQNFANTAVLVTSVRNFPDRRGIILGLLKGFVGIGGAILTQFYLAIYGHENPASLVLLLSWFPTFVSLVFCLVIRTINIRKHPEELRVLYHLLYVSVILALFLLFLTITQKQAEFSSAGYISGAAVIVGLLSIPLLIAIREELILFKLNKQTNKNQPTPVFVPEQKPSSNPPPTNNDSLTPLEEISETDSPSCFSNILNKPERGSDYTILQALFSKDMALVFVGTLCGCGSSLAAIDNIGQIGESLGYPSQSISIFVSWVSIFNFFGRVGSGFISETLMTKYKLPRPLMFAFSHLLTCIGMLFIAFPYSGSIYIASLIIGFGFGAQVPMVFAIISELFGLKYYATIFNCAQLAVPIGSYVLNVDVIGRLYDIEAIKDGGIKNGKGLTCHGIHCFSGSFLILAVVVLIGALASLVLAFRTRDFYRGDVYKKYKEDMWIPQSDMEFYCLDNKKKVDNNVQRIVMPPKYSFLNII 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4404244 4406043 - CrPI670011_03g005690.1 Cre03g0569 492599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0569 599 Gene3D MFS general substrate transporter like domains 345 588 IPR036259 -
Cre03g0569 599 Pfam Major Facilitator Superfamily 289 481 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cre03g0569 599 Pfam Nodulin-like 20 266 IPR010658 -
Cre03g0569 599 MobiDBLite consensus disorder prediction 283 317 - -
Cre03g0569 599 MobiDBLite consensus disorder prediction 298 317 - -
Cre03g0569 599 CDD MFS_Mch1p_like 19 536 - -
Cre03g0569 599 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 559 - GO:0016020(PANTHER)
Cre03g0569 599 SUPERFAMILY MFS general substrate transporter 22 548 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0569 Cre-Chr3:4404244 Cre03g0574 Cre-Chr3:4425006 6.80E-171 dispersed
Cre03g0568 Cre-Chr3:4399945 Cre03g0569 Cre-Chr3:4404244 3.30E-190 tandem
Cre03g0569 Cre-Chr3:4404244 Cre03g0570 Cre-Chr3:4410477 1.90E-176 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0569 - - - 0.0