Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0574 ATGGGTACAACCACCGAAGCCGACGGTCCCCACGGCTACACAGCACTCCGATTCTCCTTGCAGGTGATTAAAGGACGGTGGTTCACCGTGTTCGCTACATTTCTGATCATGGCCGGCGCCGGCGCAACCTATCTCTTCGGTGTCTACTCCAAACAGATCAAAGCGACGCTTGGATATGACCAAACCACTTTGAATCTGATGGGTTTTTCTAAAGATCTGGGTGCTAATGTCGGTGTGCTGTCCGGTTTAGTGGCGGAGGTCACGCCGACTTGGTTCGTTCTCCTCCTTGGCTCCGCCTTGAACTTCACCGGATACTTCATGATTTGGCTTGCGGTTACCGGTAGAATTGCAAAGCCTCAAGTCTGGCAGATGTGTCTTTACATTTGCATTGGAGCGAATTCCCAGAATTTTGCTAATACTGGCGCTTTGGTTACTTGCATCCAGAATTTCCCCGAGAGCCGTGGAGCTATGATGGGGCTTTTGAAGGGCTTCACAGGGCTGAGCGGCGCCATTCTCACACAGATTTATTTGGCCGTCTATGGCGATGATGCCACGGCGTTGATCCTTCTAATTGGGTGGCTCCCGGCGGCGCTCTCCGTCGTTTTTGTTTTCACGATTCGGAGGCTCAGAGCAGAGAGACAACCGAACGAGAAGAGGGTTTTTTACCATTTCCTTTATGTCTCAATCGGGTTAGCGCTTTTCATCATGCTTATGAATATTGTTCAGAAGAAAGTGGAATTCAATCATACGGCTTATGCTATGAGTGCTACTGTGGTTTGCGTATTTCTTTTCCTTCCTCTCTTGATTGTGATCCGGGAAGAGCTTCATCTCTGGAATGCAATGAAAAACCCCCCAATTCCCAACGAAAAGCCACAATCAAAATCTCAACCAAAACCAATTGATGAACCCAAAATCATCACCGAAGAATCAAAAGAAATCAAGGAAATCACAAACCCACCACCAGCGTCCTGTTTCTCCAACATTTGTCACAAACCAGCCAGAGGAGACGATTACACAATTCTCCAAGCACTTCTCAGCGTGGATATGTTGGTTCTCTTCATCGCAACATTCTGTGGATTAGGCACAAGCTTAACCGCAGTAGACAATTTAGGGCAAATCGGTGAATCACTCGGCTACCCATTAAAAACAGTAAAATCATTCGTTTCATTAGTAAGCATTTGGAATTACTTCGGCAGAGTATTCTCTGGATTCGTCTCTGAAACCCTTCTCGCAAAATTCAAATTCCCAAGACCTTTAATGATGACATTAGTCCTTCTTCTCTCTTGCATTGGCCAACTCTTAATCGCATTTCCAGTGCCAGGCTCCGTCTACATAGCCTCCGTCATCATCGGATTCTCCTTCGGCGCACAACTTCCCCTGCTTTTCGCCATAATTTCAGAGCTATTCGGACTGAAATATTTCTCCACTCTGTTCAATTGTGGGCAAATCGCGAGCCCGTTAGGATCGTATATTCTGAATGTGAAGGTCGCTGGAATGATGTACGACATGGAAGCTTTAAAGCAGCTGAAGGAGAAGGGGTTAGACAGATCGGCGGTGAAGGAATTGACTTGCATTGGAAAGCAATGTTTCAGGAAATCGTTTACGTTAATGGCGATTGTTACCTTTGTTGGAGCTATGGTTTCACTGGTTTTAGTGATGAGAACAAGGGAGTTTTACAAAGGGGATATTTACAAGAAATTTAGAGACGAAGAACTGAACGAGGAAACCACCGGAGCAGAGGTTACTGCTCGGGAATCCAAGTAA 1764 46.2 MGTTTEADGPHGYTALRFSLQVIKGRWFTVFATFLIMAGAGATYLFGVYSKQIKATLGYDQTTLNLMGFSKDLGANVGVLSGLVAEVTPTWFVLLLGSALNFTGYFMIWLAVTGRIAKPQVWQMCLYICIGANSQNFANTGALVTCIQNFPESRGAMMGLLKGFTGLSGAILTQIYLAVYGDDATALILLIGWLPAALSVVFVFTIRRLRAERQPNEKRVFYHFLYVSIGLALFIMLMNIVQKKVEFNHTAYAMSATVVCVFLFLPLLIVIREELHLWNAMKNPPIPNEKPQSKSQPKPIDEPKIITEESKEIKEITNPPPASCFSNICHKPARGDDYTILQALLSVDMLVLFIATFCGLGTSLTAVDNLGQIGESLGYPLKTVKSFVSLVSIWNYFGRVFSGFVSETLLAKFKFPRPLMMTLVLLLSCIGQLLIAFPVPGSVYIASVIIGFSFGAQLPLLFAIISELFGLKYFSTLFNCGQIASPLGSYILNVKVAGMMYDMEALKQLKEKGLDRSAVKELTCIGKQCFRKSFTLMAIVTFVGAMVSLVLVMRTREFYKGDIYKKFRDEELNEETTGAEVTARESK 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4425006 4426769 - CrPI670011_03g005740.1 Cre03g0574 492604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0574 587 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 25 568 - GO:0016020(PANTHER)
Cre03g0574 587 SUPERFAMILY MFS general substrate transporter 26 557 IPR036259 -
Cre03g0574 587 FunFam Nodulin family protein 340 561 - -
Cre03g0574 587 CDD MFS_Mch1p_like 25 545 - -
Cre03g0574 587 Gene3D MFS general substrate transporter like domains 344 560 IPR036259 -
Cre03g0574 587 Pfam Nodulin-like 26 271 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0561 Cre-Chr3:4357386 Cre03g0574 Cre-Chr3:4425006 7.00E-176 dispersed
Cre03g0563 Cre-Chr3:4367703 Cre03g0574 Cre-Chr3:4425006 4.70E-142 dispersed
Cre03g0569 Cre-Chr3:4404244 Cre03g0574 Cre-Chr3:4425006 6.80E-171 dispersed
Cre03g0570 Cre-Chr3:4410477 Cre03g0574 Cre-Chr3:4425006 2.40E-129 dispersed
Cre03g0574 Cre-Chr3:4425006 Cre05g2307 Cre-Chr5:34624692 1.60E-188 dispersed
Cre03g0571 Cre-Chr3:4416152 Cre03g0574 Cre-Chr3:4425006 1.30E-119 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0574 - - - 0.0