Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0655 ATGGCAGATCGGAATCACTTTAACGCCGCCCATTTCGTTGATCTTCGAAGCGGTTTCTGTCCTCAGACGCAGATTTTCCACAGCCTCCGACCACCGCTCTCACTTCCACCATTATCTCAGCCTCTCTCCGTCACCGAACACGCTCTTTCTCTCCTTCAATCATCCCCTCCCCCTGCAAACGCCACCGTTCTCGTCGACTCCAACTCCGGCTTCCATCTCTCCTACGCCATTTTCATCCGTCAAATTCGAACCCTCGCCTCAAATCTCAAAGCTTTAACCTCCCTCTCCAATGGACAAGTGGCGTTTATTCTCGCTCCGACTTCTCTGCAAGTCCCTGTGTTGTATTTCGCTCTGTTATCTCTCGGTGTCATTCTCTCTCCGGCAAATCCAACCGGTTCCGAATCAGAGATTTCTCATCAGATTCGACTCAGTAAACCGGTCATTGCCTTCGCTACATCCTCAACGGCGTCCAAGCTCCCTAGGTTTCGATTCGGAACCGTCCTGATCGATTCACCTCATTTCCTCTCCATGATGACTGACATCAACAGATCCGATCGTCTCACCGACATCAAAATCGATCAGTCCGACTCGGCGGCGATTCTGTACTCGTCAGGTACCACAGGGCGAGTGAAAGGCGTGTTACTGAGTCATCGGAATCTTATTGCGGTGAACTCAGGGCGTACTGCTCTTCAATCGGAGATCAAAGAAGGAGAAATGGAGCCACATCCGGTTTCTCTGTGTCTGTTGCCTTTGTTCCATGTTTTCGGATTCGTGATATTGCTTCGAGCGATTTCGCGAGGAGAAACGTTGGTTCTGATGCAGAGATTCGATTTCGAAGCGATGCTAAGAGCAGTGGAGAAGTTTAGGGTTATGTACATCCCTGTTTCTCCGCCGCTTGTGGTGGCGATGGCGAAGTCGGAACTGGTGGCGAAATACGATCTCAGTTCTCTTCAAGTTTTGGGGTGCGGCGGCGCTCCCCTTGGGAAAGAAGTGATCGATAAATTCCATCAGAAATTGCCCAACGTTGAAATTGTCCAGGGATATGGCTTGACAGAGAGTACAGCGGGGGCAGCAAGAACTCTGGGGCCTGAGGAAACCAACAACACCAATTCAGTAGGTCGCTTATCTGAAAATATGGAAGCCAAGATAGTGGATCCTGCATCTGGAGAGGCCTTACCTCCTGGCCACAAAGGAGAGCTTTGGCTGCGAGGTCCTGTAATCATGAAAGGTTATGTTGGAGATGACAAGGCAACTAATGAAACCTTACATCCAAATGGATGGCTAAAGACGGGTGATCTTTGCTATTTTGATTCTGATGGATTCCTGTACATTGTTGATAGATTAAAAGAATTGATCAAGTACAAGGCTTATCAGGTCCCACCTGCAGAATTGGAACATTTGCTTCAATCCAACCCTGAAATAATTGACGCTGCCGTGATACCCTATCCTGATGAAGAAGCTGGAGAGATTCCTATGGCTTATGTTGTTAGAAAGCCTGGAAGCAATATCACCGAGGCCCAAGTTATTGATTTCATTGCAAAACAGGTTGCGCCGTACAAGAAAATTCGACGAGTTTCTTTTATTGACGCAATCCCGAAATCGCCTGCAGGGAAGATTCTAAGGAGGGAGCTTGCGAAACATGCTCTCTCACATGGTTCTAATAAGTTGTAA 1671 48.17 MADRNHFNAAHFVDLRSGFCPQTQIFHSLRPPLSLPPLSQPLSVTEHALSLLQSSPPPANATVLVDSNSGFHLSYAIFIRQIRTLASNLKALTSLSNGQVAFILAPTSLQVPVLYFALLSLGVILSPANPTGSESEISHQIRLSKPVIAFATSSTASKLPRFRFGTVLIDSPHFLSMMTDINRSDRLTDIKIDQSDSAAILYSSGTTGRVKGVLLSHRNLIAVNSGRTALQSEIKEGEMEPHPVSLCLLPLFHVFGFVILLRAISRGETLVLMQRFDFEAMLRAVEKFRVMYIPVSPPLVVAMAKSELVAKYDLSSLQVLGCGGAPLGKEVIDKFHQKLPNVEIVQGYGLTESTAGAARTLGPEETNNTNSVGRLSENMEAKIVDPASGEALPPGHKGELWLRGPVIMKGYVGDDKATNETLHPNGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHLLQSNPEIIDAAVIPYPDEEAGEIPMAYVVRKPGSNITEAQVIDFIAKQVAPYKKIRRVSFIDAIPKSPAGKILRRELAKHALSHGSNKL 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5447969 5452770 - CrPI670011_03g006550.1 Cre03g0655 492685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0655 556 Pfam AMP-binding enzyme C-terminal domain 463 538 IPR025110 -
Cre03g0655 556 Gene3D - 34 449 IPR042099 -
Cre03g0655 556 CDD 4CL 47 544 - -
Cre03g0655 556 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
Cre03g0655 556 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 544 - GO:0016405(PANTHER)
Cre03g0655 556 FunFam 4-coumarate--CoA ligase 2 450 551 - -
Cre03g0655 556 SUPERFAMILY Acetyl-CoA synthetase-like 60 550 - -
Cre03g0655 556 Pfam AMP-binding enzyme 58 411 IPR000873 -
Cre03g0655 556 Gene3D - 450 550 IPR045851 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0655 Cre-Chr3:5447969 Cre05g1684 Cre-Chr5:28243029 1.60E-134 dispersed
Cre03g0655 Cre-Chr3:5447969 Cre03g0656 Cre-Chr3:5457704 7.30E-252 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0655 K01904 - csv:101213796 934.48