Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0668 ATGGCGACGACGACCACCAGTATTGGCGGCGGGGGCGGCGGTGGTGGTGGGGAGGATAGAGTTATGGCTACCGCTCAGCAGATAGTCAATAGCCTTAATACTCCTAAGGAGGTTCGAGACGACATGCTTTTGATCTTCTCTAGTTTTGACAATCGTCTTTCTAATATCACCAGTTTGGTCAACAGTGGGGATTCGAAGAAGGAGGAGGATCGATTTGAAGCTGCTGAGAAGGTGATTCTTCGTTGGGATTCTGGTCATGGAGCTTCTCGGAACTCGATTAATTGGGAGGACTCGCCAGATGAGGCGGCTGAGTACTTAACGGCGGTCGATGATATTATTCAGTGGATCGACGACTTGTCAATTCGTTCGGATTCTGCTGAGATCGTCGACCGTGCTGAGAACGCGATCCAGATCGCTATGTCCAGGCTTGAGGATGAGTTTCGTCATTTGTTGATTCGAAGCACCGTCCCTCTCGATGCTGAGCATCTCTACGGTTCAATTCGTAAGGTTTCCCTCTCTTTCGCTTCACACGACAGCGAAAATTCCGATGAATTTGAGTCGTTTGCCGGTGCTGACCGTGGTTCGGGAATCTACCATGAGCGTGGTGTTAGTTTAGGCGATGATTTGCGGGTCGATTTGATTCATCCTGACGCTGTTGTTGATTTGAAAGAGATCGCCGACCGGATGATTCGGTCTGGATACGAGAAAGAGTGTGTTAATGTGTATACTGGTGTCCGACGCGATGCTTTAGATGAGTGCTTGGTGGTTCTTGGACTTGAGAAGCTAAGTATTGAGGATGTCCAGAAAATTGACTGGAAAATCTTGGACGAGAAGATGAAGAAATGGATCCAAGCTGTTAAGGTCAGTGTTCGAGTACTTTTGACTGGCGAGAAGCGACTGTGTGACTATATCTTTAGTGGGTCTGATGACTCTGAGGAAGTTTGCTTCAATGAGACTGCAAAAGGGTGCATCAGACAATTACTAAATTTTGCAGAAGCCATTGCTATAGGGGAAAGGTCAGTGGAGAAGCTATTTCGTATTCTAGATATGTATGAAGCTCTGGAGTACGTTTTCCCTGATTTGCAGGCTATGGTCACTGATGAATTTGTGATTGAGGAGGCGCGAGGAGTACTTTCTAGGCTGGGAGAGGCCGCCAAAGGTACATTTGCTGAATTTGAGAATGCTGTTCGGAGTGAGACTTCTAAGAAAACAATGTTAAATGCTGAGATTCACCCGCTCACTCGTTATGTCATGAATTACTTAACATTGGTTGTGGTTTATAGTAAGACTCTGGATGCACTTTTAGAAGGCGACGATGAGGATTTGCATCATCTAGGGGGTGATGGTGCTGATAATTTGGAGTTAGAAACTATGTCTCCATTAGCTCGTCGTCTGTTTTCATTGATATCAACACTGGAGACCAATCTAGAGAGAAAATCCAAACTCTATGGTGATGATGCAATACAGTATATATTTCTCATGAACAATATTCAATATATTGTGCAGAAAGTGAAGGATTCTGAGCTTGGAAAGCTCTTGGGTGACCGCTGGGTTCGTAAACGCCGTGGCCAAGTTCGCATTTATGCGACGAACTATCTTAGGGCATCTTGGGGCAAACTATTGTCTTTCTTGAAGGAAGAAGGTACTGGTGGGAGCTCCAATAGTGCCCTGAAACTAGCTACTTTAAAGGAAAAATTCAAAAATTTCAATGCTGGCTTTGAGGAAATCTATAGAGTTCAGACAGGTTGGAAGGTTCCAGATGCTCAACTACGAGAAGAGCTCCGAATTTCAGTGTCCGCAAAAGCGCTACCTGCATATCGTGCCTTCTTGGGAAGACATGGAGGTCAGTTAGAGAATACAAGACATGCTGGGAGAGATACTGAACCGACTCAATTGACAGCTTTGGTTTTTGACAAGAGAAAGAAGAAGAAAACGGATTTGGGAATTAACAAATCGACAAGCAGGAAATCGCAATTCAGAGCAGCTTCTTAA 1992 45.03 MATTTTSIGGGGGGGGGEDRVMATAQQIVNSLNTPKEVRDDMLLIFSSFDNRLSNITSLVNSGDSKKEEDRFEAAEKVILRWDSGHGASRNSINWEDSPDEAAEYLTAVDDIIQWIDDLSIRSDSAEIVDRAENAIQIAMSRLEDEFRHLLIRSTVPLDAEHLYGSIRKVSLSFASHDSENSDEFESFAGADRGSGIYHERGVSLGDDLRVDLIHPDAVVDLKEIADRMIRSGYEKECVNVYTGVRRDALDECLVVLGLEKLSIEDVQKIDWKILDEKMKKWIQAVKVSVRVLLTGEKRLCDYIFSGSDDSEEVCFNETAKGCIRQLLNFAEAIAIGERSVEKLFRILDMYEALEYVFPDLQAMVTDEFVIEEARGVLSRLGEAAKGTFAEFENAVRSETSKKTMLNAEIHPLTRYVMNYLTLVVVYSKTLDALLEGDDEDLHHLGGDGADNLELETMSPLARRLFSLISTLETNLERKSKLYGDDAIQYIFLMNNIQYIVQKVKDSELGKLLGDRWVRKRRGQVRIYATNYLRASWGKLLSFLKEEGTGGSSNSALKLATLKEKFKNFNAGFEEIYRVQTGWKVPDAQLREELRISVSAKALPAYRAFLGRHGGQLENTRHAGRDTEPTQLTALVFDKRKKKKTDLGINKSTSRKSQFRAAS 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5569019 5573784 - CrPI670011_03g006680.1 Cre03g0668 492698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0668 663 SUPERFAMILY Cullin repeat-like 72 622 IPR016159 -
Cre03g0668 663 MobiDBLite consensus disorder prediction 1 20 - -
Cre03g0668 663 Pfam Exocyst complex component Exo70 N-terminal 72 152 - -
Cre03g0668 663 PANTHER EXOCYST COMPLEX PROTEIN EXO70 55 624 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Cre03g0668 663 Gene3D Exocyst complex component Exo70 86 642 - -
Cre03g0668 663 Pfam Exo70 exocyst complex subunit C-terminal 280 620 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0668 Cre-Chr3:5569019 Cre03g1627 Cre-Chr3:32303281 6.30E-242 dispersed
Cre03g0668 Cre-Chr3:5569019 Cre02g2353 Cre-Chr2:36944713 6.60E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0668 K07195 - csv:101212753 1143.64