Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0717 ATGGCGTCAAGAATCAAAACTGGTGAGGATAGTGACGATAAAGATAGTAGCATCTGGGTTTTGGATCACCAGATGGACCAGCCAATGGAGGAGGAGGCTAGCCAGCTAAGAAATGCGCATCAGGAAAAGGGTCATTCTGTATTTAAAATTCTACAACTTGCATTCCAAAGCCTTGGAATAGTGTACGGAGATTTGGGCACTTCCCCTTTATATGTCTTCTATAACACATTCCCCGATGGAGTTGAAAATACAGAGGACTTGATAGGAGCTCTGTCATTGATTATATACTCTCTGACTCTCATAACCCTTATAAAGTACGTATTTGTAGTCTGCAAGGCAAATGACAATGGTCAAGGTGGAACATTTGCTCTATATTCGTTGCTGAGCCGTCATGCTAAAATATTAACTATCCCTAACCATGACCTCAGTGATGAGAAGCTTACAACTTATAGTCGTTCTAAGTATCGGGAACAATCATTTGCTGCAAAAACTAAGAGATGGCTGGAAGGGCATCATTTTAAGAAACACGCAATTCTTGTTCTCGTTCTTGTTGGCTCCTGCATGGTGATTGGGGATGGAATCCTAACACCTGCTATTTCAGTTCTTTCTGCTGTTGGGGGGATCAACGTTGGTCATGCAAAAATAAGCAATGATGTAGCTGTTCTTGTTGCTATTGTCATACTTGTGTTCTTGTTTGGCATGCAACGTTATGGCACAGATAAAGTCGGTTGGCTTTTTGCCCCGGTAGTTTTTCTGTGGTTCACCTTAATAGGAGGCATCGGTATATTTAACATCTGCAAATATGATCACAGTGCCCTGAGAGCCTTTTCTCCAGTATATATATATCGGTACTTCAAACGGGGAGGGAAAGCTGGATGGACATCCCTTGGAGGGATCATGCTTAGTATTACAGGAACTGAAGCACTTTTTGCAGACCTATCCCATTTTCCAGTTTCCTCTATACAAATTGCTTTTACAGTAGTTGTATTTCCTTGCCTTCTTCTAGCCTACACTGGGCAAGTTGCCTATCTCATGAAAAACCCAGATTATGTTATTGGTGCCTTCTACCATTCAATCCCAGAAAGTATATATTGGCCAGTATTTCTTGTTGCAACTACCGCCGCTATCGTTGCAAGCCAAGCCACCATATCTGCAACCTTTTCATTAGTCAAGCAAGCCCTTGCACTTGGTTGCTTTCCAAGAGTTAAAGTTGTTCATACTTCTACGACTTTCCGTAATCAGATATATATTCCTGATATTAATTGGATCCTGATGATTCTTTGCATTGCCGTGACAGCTGGGTTCAAAAATCAAAGCCAAATTGGAAATGCTTCTGGGACAGCAGTGATTATAGTGATGTTGGTGACCACATTCCTCATGACTTTAATAATGATATTAGTGTGGCACTCCCACTGGTCTCTAGTTCTTCTCTTCACTTGCTTATCACTCCTTGTGGAGGGTTTCTACCTCTCCTCAGTTATTCAGAAGGTTTATCAAGGTGGGTGGGTTCCCTTGGTTATAGCAACAGCATTTTTCATCATCATGTACATTTGGCATTATGGTACAGCTAAACGTTATGAAATTGAGATGCACACTAAGGTTTCAATGGCATGGATTCTTAGCCTTGGCCCCAGTTTAGGACTTGTAAGGGTGCCTGGGATAGGACTTGTGTACACAGAACTAGCAAGTGGAGTCCCCCACATCTTTTCGCACTTCGTCACAAACTTACCCGCCATTCATTCGGTTGTGGTCTTTGTTTGTTTGAAGTGTTTGCCTGTCCACACAGTCCCAGAAGAAGAAAGATTTCTAGTAAAACGGATTGGACCTAAGAATTTTCGCATGTTTCGGTGTGTGGCTAGATATGGTTACAAAGACCTTCACAAGAAAGATGATGATTTTGAGAAGAAACTCTTTGATAGTATCTTCTTGTTTGTTCGACTCGAGTCATTGATGGATGGTGGATCTTCAGATTCGGACGTGTCTAGCCTACTTGATCAACAGGATGAAACAATTACAGAATATGCATTGAACACCATTAATTCAACTTGCTCAACTGTGGAATCAACAGGCCTACGAACAGCAGATTCGATTGAGCTTGCCAATTCTCCATTGCATCAGAACCAAGCCATCATAACACCTAGTCATGAAAATGGTCAGACTGAGACAGACGAATTAGAATTCTTGGTTAGCTGTAAAAATGTTGGAGTTGTACACATTCTTGGAAATACAGTAATGAAAGCTAGGAGGGACTCCAGATTATGCAAAAGGATCGCAATTGATTATATATATGCATTTCTTAGGAAGATCTGCAGGGAGAACAGCGTGATGTTCAATGTTCCTCATGAGAGTTTGCTTAACGTTGGCCAAACATTCTATGTATGA 2382 41.35 MASRIKTGEDSDDKDSSIWVLDHQMDQPMEEEASQLRNAHQEKGHSVFKILQLAFQSLGIVYGDLGTSPLYVFYNTFPDGVENTEDLIGALSLIIYSLTLITLIKYVFVVCKANDNGQGGTFALYSLLSRHAKILTIPNHDLSDEKLTTYSRSKYREQSFAAKTKRWLEGHHFKKHAILVLVLVGSCMVIGDGILTPAISVLSAVGGINVGHAKISNDVAVLVAIVILVFLFGMQRYGTDKVGWLFAPVVFLWFTLIGGIGIFNICKYDHSALRAFSPVYIYRYFKRGGKAGWTSLGGIMLSITGTEALFADLSHFPVSSIQIAFTVVVFPCLLLAYTGQVAYLMKNPDYVIGAFYHSIPESIYWPVFLVATTAAIVASQATISATFSLVKQALALGCFPRVKVVHTSTTFRNQIYIPDINWILMILCIAVTAGFKNQSQIGNASGTAVIIVMLVTTFLMTLIMILVWHSHWSLVLLFTCLSLLVEGFYLSSVIQKVYQGGWVPLVIATAFFIIMYIWHYGTAKRYEIEMHTKVSMAWILSLGPSLGLVRVPGIGLVYTELASGVPHIFSHFVTNLPAIHSVVVFVCLKCLPVHTVPEEERFLVKRIGPKNFRMFRCVARYGYKDLHKKDDDFEKKLFDSIFLFVRLESLMDGGSSDSDVSSLLDQQDETITEYALNTINSTCSTVESTGLRTADSIELANSPLHQNQAIITPSHENGQTETDELEFLVSCKNVGVVHILGNTVMKARRDSRLCKRIAIDYIYAFLRKICRENSVMFNVPHESLLNVGQTFYV 793
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6050398 6054870 - CrPI670011_03g007170.1 Cre03g0717 492747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0717 793 Pfam K+ potassium transporter C-terminal domain 552 790 IPR053952 -
Cre03g0717 793 Pfam K+ potassium transporter integral membrane domain 53 540 IPR053951 -
Cre03g0717 793 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 39 792 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre03g0717 793 NCBIfam potassium uptake protein 53 792 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0717 Cre-Chr3:6050398 Cre05g1412 Cre-Chr5:16837140 1.80E-198 dispersed
Cre03g0717 Cre-Chr3:6050398 Cre03g0718 Cre-Chr3:6054928 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0717 K03549 - csv:101217671 1384.39