Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0792 ATGCTCAATTTTCTTACTTTCCTCTTCTTCCTCAATTTCCTTACCCATGGAAACGCTCAGACCCCAGTTCCTTACCCATATCGCAGTTGCTTGTCCGGCAATTTCACTCACAACAGCACCTATCAGTCCAACCTCAATCTTCTCTTTTCAAATCTCTCCACCAACGGCCCCCCAAGAAACAGATTCTTCAATACTTCCATCGGCCGACCCCCAAACGACGCCGTTTACGGTCTCTTCCAGTGCCGTGGAGACGTCGCCGACACCGTCTGTCGTACTTTCTTAGCCACCGCAACCAGAGACGCAGAGCGGCTGTACTGTCCTCTTAGAAAAGGCGCTGTGATTTGGTACGACGAAATCATATTCCGCTATTCCGACCAACCTTTCTTTTCCACGGTTTCCTCAAACCCAAGTATGCAGTTACTGAATACGGGTACTATAGACGTCGACAAGGCTCGATTCAACCAACTAGTCATGTCCACGTTGAGAGCCACCGCGGCTCAGGCGGCGAACGCCTATTTGGTGGGCAATTTGTTTGCGACCCAGATGGCTAATTTTACAGAAGACCTAACCCTTTACACATTAGCTCAGTGTACCGGCGATTTGTCCAATACGGATTGCGAAGGATGCTTACGCCAAGCTACCAACTCAATTCCAAGTTGTTGTAGTAATAAACGAGGCGGGCGCGTTCTGCTTCCCAGCTGTTATGTTCGTTACGAAGTTTACATGTTTTACGAATTAACGCCTACGAATTCCTTACCGCCTCCGGCAACACCGCCTCTTCTTCCTTCTTCTCCTCCGCCAGGGGAAAGAAGGTCCTCAACGGTGTTAATTGTGGCCATTGTAGCTCCAATTACTGTCTCCATACTGCTCTTTGTTGTGGGATGTTGTTTCCTGCGCCTGAGAGCGAAGAACAGATACTCTGCTGTGAAGGAAGATAGTGTTGTTAATGAGATGACGACTGTGGAATCTCTGCAATTTGATTTCAAAACAATCGAAGCTGCTACTAACAAATTCTCAGAGGAAAACAGGTTGGGAGAAGGTGGATTTGGTGCTGTCTTCAAGGGTAGGCTTGAAAATGGACAAGAGATAGCAGTGAAGAGGCTGTCAAGAGGTTCTTTGCAAGGTTCTGAAGAGTTCAAGAATGAGGTTATGTTGGTTGCTAAGCTTCAACATAGAAATCTTGTAAGGTTATTGGGATTCTGCTTGGAGGGGGAAGAAAAGATTCTCATCTATGAATACATTCCCAACAAAAGCCTTGACTTTTTCTTGTTTGATCTAGAGGGACAGAGGCAGTTGGATTGGTTGAAACGATATAAGATCATCAATGGAATTGCTCGAGGAATATTGTATCTGCATGAAGATTCTCGTCTTAGAATTATTCACCGTGATCTTAAAGCGAGTAACATCTTGTTAGACAAAGATATGAATGCAAAAATTTCAGACTTTGGCATGGCAAGGATTATTCAAATGGATCAAACCCAAGGAAATACAAGTAGGATTGTTGGTACCTATGGTTACATGTCTCCTGAGTATGCAATGCACGGAAATTTCTCAATGAAATCTGATGTGTATAGCTTTGGAGTGTTAATGTTAGAGATTTTAAGTGGTAAGAAAAACAACACCTTTTACTTGTCAGATCTTGCCGAAGACATTTTGACATATGCTTGGAAATTGTGGAAGGATGGAACGCCATTAGAGTTATTGGATCCAATGTTGAGAGATAATTACTCAAGAAATGAGGTGGTTAGATGCATTCATATTGCTTTATTATGTGTTCAAGAGGATCCTAACAGCAGACCTTCCATGGCTTCCATTGTTCTTATGCTTAATAGTTATTCCGTTACTTTGTCATTGCCTGAAGAGCCAGCATTCTTCTTGCGTAGTAAAGACAATCACATTACAATGGGCAGCGATCATTCTACTAATAAGTCTATTCAGTTTTCTGTTAACGAAACATCTATATCTGAGTTGCATCCACGATGA 1983 43.22 MLNFLTFLFFLNFLTHGNAQTPVPYPYRSCLSGNFTHNSTYQSNLNLLFSNLSTNGPPRNRFFNTSIGRPPNDAVYGLFQCRGDVADTVCRTFLATATRDAERLYCPLRKGAVIWYDEIIFRYSDQPFFSTVSSNPSMQLLNTGTIDVDKARFNQLVMSTLRATAAQAANAYLVGNLFATQMANFTEDLTLYTLAQCTGDLSNTDCEGCLRQATNSIPSCCSNKRGGRVLLPSCYVRYEVYMFYELTPTNSLPPPATPPLLPSSPPPGERRSSTVLIVAIVAPITVSILLFVVGCCFLRLRAKNRYSAVKEDSVVNEMTTVESLQFDFKTIEAATNKFSEENRLGEGGFGAVFKGRLENGQEIAVKRLSRGSLQGSEEFKNEVMLVAKLQHRNLVRLLGFCLEGEEKILIYEYIPNKSLDFFLFDLEGQRQLDWLKRYKIINGIARGILYLHEDSRLRIIHRDLKASNILLDKDMNAKISDFGMARIIQMDQTQGNTSRIVGTYGYMSPEYAMHGNFSMKSDVYSFGVLMLEILSGKKNNTFYLSDLAEDILTYAWKLWKDGTPLELLDPMLRDNYSRNEVVRCIHIALLCVQEDPNSRPSMASIVLMLNSYSVTLSLPEEPAFFLRSKDNHITMGSDHSTNKSIQFSVNETSISELHPR 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6697279 6700268 + CrPI670011_03g007920.1 Cre03g0792 492822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0792 660 Gene3D Phosphorylase Kinase; domain 1 300 413 - -
Cre03g0792 660 ProSiteProfiles Gnk2-homologous domain profile. 23 128 IPR002902 -
Cre03g0792 660 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 160 625 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Cre03g0792 660 Pfam Salt stress response/antifungal 33 126 IPR002902 -
Cre03g0792 660 Pfam Salt stress response/antifungal 151 240 IPR002902 -
Cre03g0792 660 ProSiteProfiles Protein kinase domain profile. 338 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0792 660 SUPERFAMILY Protein kinase-like (PK-like) 323 642 IPR011009 -
Cre03g0792 660 FunFam Cysteine-rich receptor-like protein kinase 10 300 413 - -
Cre03g0792 660 Pfam Protein tyrosine and serine/threonine kinase 341 607 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0792 660 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524(InterPro)
Cre03g0792 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0792 660 FunFam Cysteine-rich receptor-like protein kinase 25 136 243 - -
Cre03g0792 660 Gene3D - 135 243 IPR038408 -
Cre03g0792 660 Gene3D - 24 128 IPR038408 -
Cre03g0792 660 Gene3D Transferase(Phosphotransferase) domain 1 414 618 - -
Cre03g0792 660 ProSiteProfiles Gnk2-homologous domain profile. 134 243 IPR002902 -
Cre03g0792 660 CDD STKc_IRAK 344 610 - -
Cre03g0792 660 SMART serkin_6 338 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0792 660 FunFam cysteine-rich receptor-like protein kinase 10 414 616 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0506 Cre-Chr2:2162975 Cre03g0792 Cre-Chr3:6697279 2.70E-31 dispersed
Cre03g0792 Cre-Chr3:6697279 Cre04g1842 Cre-Chr4:36164430 3.90E-143 dispersed
Cre03g0794 Cre-Chr3:6711056 Cre03g0792 Cre-Chr3:6697279 2.80E-48 dispersed
Cre03g0797 Cre-Chr3:6725212 Cre03g0792 Cre-Chr3:6697279 7.80E-20 dispersed
Cre05g0486 Cre-Chr5:4368859 Cre03g0792 Cre-Chr3:6697279 9.80E-09 dispersed
Cre06g1499 Cre-Chr6:9619331 Cre03g0792 Cre-Chr3:6697279 5.30E-10 dispersed
Cre03g0789 Cre-Chr3:6689038 Cre03g0792 Cre-Chr3:6697279 3.20E-38 proximal
Cre03g0790 Cre-Chr3:6689529 Cre03g0792 Cre-Chr3:6697279 7.20E-65 proximal
Cre03g0792 Cre-Chr3:6697279 Cre03g0793 Cre-Chr3:6707415 1.70E-51 tandem
Cre06g0827 Cre-Chr6:1595307 Cre03g0792 Cre-Chr3:6697279 1.70E-13 transposed
Cre09g1881 Cre-Chr9:37413551 Cre03g0792 Cre-Chr3:6697279 4.20E-15 transposed
Cre02g0504 Cre-Chr2:2153347 Cre03g0792 Cre-Chr3:6697279 1.40E-27 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63946 PF07714 PK_Tyr_Ser-Thr 3.30E-50 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0792 - - - 0.0