Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0796 ATGTTCCACTCAAGCCTTCTCTTTCATATCATCATCTTCTCCTTCTTCCTCTTCATCAGCCCTGCAATTCCTCAGCCAAATACCAATTGTTCAAACGACAATGACAATTGCACAGCCAGCAGCACCTACAGAGCCACAATTATTACACCCAATTGTAATTTTGGCTATGAGATTATCAATTTCTTTGACTCTGCAGCTGTTTCCAGAGTTTCTCGGTCGACCTCGCCGCCGACACCGCCATCCCCTCTCTTGCCACTCTCACCTCCCTCTCTTTCACCAAATACAACAACCAATGTCAAAGAAAAGGAGTCGAAGAGATTGAAGATTGTCATCATTATAGTTCTCCCAGTGGTTGTTGTAGTTGTGGTATTAATTGTCAGCATCTTCATCTTTTTAAGAGCAAGAAAACAAAGGGATGGAGTTGCAAGTTTACAAGTGGATGACACTGCAGATTTTGAAACTTTGGTATTTGACATCAGTACTATAAGAACTGCAATAGATGACTTCTCAGATGAAAATTATATCGGACAAGGTAGATTTGGAGCTGTTTACAAGGGAAGCCTTGTCAATGGACAAGAAATAGCAGTGAAGTTTCTCAAAAAGAACCCCATGGAAGGAGAGAGTGAGTTTAAGAATGAAGTCCTGTCAATGGCCAAACTTCAACACCGGAATTTAGTTCGGTTTCTCGGTTTCTGCCTCCACAAAGACATGATGATTTTCGTGTCCGAGTTCGTGCAAAACTCAAGTCTTGATAAATTCATATTTGAGCCATTGAAAGGTCAAGATTTGGACTGGGGAACGCGCTACAAAATCATTCAAGGCATTGCTACAGGCCTTGTTTATCTTCATCAAGATTCTCAAATTAAAGTTGTTCATAGAGATCTCAAAGCTACAAATATTTTATTAGATGCACAAATGAATCCTAAAATTTCTGATTTTTTCATGGTAAAGTTGTTTCAAGAAGGTCCAGCTCAAGAAAGTACATGTCTGGGATACATGGCTCCGGAATATTTTGTCTCCGGAATGTCGTCAAAAAAGTCGGATGTGTTTAGTTTCGGCGTGTTAGTTATTGAGATTGTGACTGGCCAAAAAATCACATCTTTCTGTGAGGAAAATGAGGGAAAGGACATATATGATCTTATATACCATGTATGGAGAAACTGGAGGGCAGGAACAATACTAAATGTTGTAGATCCTATATTGCGAGGTGGCTCAAGTAATGAAATAAAGAAATGTATCAACATTGGATTGCTTTGTGCTCAAGAAAATAACGCTAACAGGCCAACTATGGAAACAGTACTTCTCATGCTTAATAGTGACACAATCACTCTACCAATACTTTCTCCGCTAGGTGATTACATGAATAGGAGTCCCAAATCAGACATGTCTTCTTCACAAGAAAGGTCTTCTTCCCATGTAGTAGAGATAGAATGA 1434 39.47 MFHSSLLFHIIIFSFFLFISPAIPQPNTNCSNDNDNCTASSTYRATIITPNCNFGYEIINFFDSAAVSRVSRSTSPPTPPSPLLPLSPPSLSPNTTTNVKEKESKRLKIVIIIVLPVVVVVVVLIVSIFIFLRARKQRDGVASLQVDDTADFETLVFDISTIRTAIDDFSDENYIGQGRFGAVYKGSLVNGQEIAVKFLKKNPMEGESEFKNEVLSMAKLQHRNLVRFLGFCLHKDMMIFVSEFVQNSSLDKFIFEPLKGQDLDWGTRYKIIQGIATGLVYLHQDSQIKVVHRDLKATNILLDAQMNPKISDFFMVKLFQEGPAQESTCLGYMAPEYFVSGMSSKKSDVFSFGVLVIEIVTGQKITSFCEENEGKDIYDLIYHVWRNWRAGTILNVVDPILRGGSSNEIKKCINIGLLCAQENNANRPTMETVLLMLNSDTITLPILSPLGDYMNRSPKSDMSSSQERSSSHVVEIE 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6722558 6724656 + CrPI670011_03g007960.1 Cre03g0796 492826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0796 477 FunFam Lectin-domain containing receptor kinase A4.3 245 455 - -
Cre03g0796 477 Gene3D Transferase(Phosphotransferase) domain 1 245 443 - -
Cre03g0796 477 Gene3D Phosphorylase Kinase; domain 1 133 244 - -
Cre03g0796 477 MobiDBLite consensus disorder prediction 457 477 - -
Cre03g0796 477 SUPERFAMILY Protein kinase-like (PK-like) 149 437 IPR011009 -
Cre03g0796 477 MobiDBLite consensus disorder prediction 72 99 - -
Cre03g0796 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0796 477 SMART serkin_6 169 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0796 477 ProSitePatterns Protein kinases ATP-binding region signature. 175 197 IPR017441 GO:0005524(InterPro)
Cre03g0796 477 MobiDBLite consensus disorder prediction 75 89 - -
Cre03g0796 477 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 444 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cre03g0796 477 Pfam Protein tyrosine and serine/threonine kinase 173 433 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0796 477 ProSiteProfiles Protein kinase domain profile. 169 447 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0796 477 MobiDBLite consensus disorder prediction 457 471 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0796 Cre-Chr3:6722558 Cre04g1840 Cre-Chr4:36140352 7.00E-94 dispersed
Cre03g0795 Cre-Chr3:6717340 Cre03g0796 Cre-Chr3:6722558 4.70E-157 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63948 PF07714 PK_Tyr_Ser-Thr 2.80E-43 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0796 - - - 0.0