Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0823 ATGGGAAAACTGATTTGGAGATACAAGGTTTCGATTTTTCTGTTTTTCTGGACGACCATTGCTCTGTTTCCCAGAAAATCATTCGCAATTGATAGCATAAAAGCAGGGGAATCTATCAATGGCAGTACCCAGATGCTAGTTTCAGCTCAACAGAACTTTGTGCTGGGAATGTTCAATCCTAAAGACACCAAATTTCATTACTTGGGAATATGGTACAAGAACATACCACAAACTGTTGTGTGGGTAGCAAACAGAGACAAGCCACTTGTAAATTCCTCTGCTAGATTAACATTCAATGGAGGAAACCTCGTTCTTCTGAATGAAGGAGATGGAATTCTATGGTCTTCTACTACTTCAAAATTGGTGAAAGAACCAATCGCTCAACTACTAGATAATGGTAATTTGGTTTTAAGAGAATTTGGGTCTGAAAATTATTTGTGGGAGAGTTTCAACTATCCTTCTGATACTCTGTTACCGGGTATGAAACTTGGTTGGGACTCGGTAACCGGTCTGAACCGGAAGTTGACGGCATGGAAAAGCTCAAACGATCCGTCGTCTGGGGATTTCACTTATGGAATGGACCTTGGTGGGCTTCCCCAGTTTGAAACTCGCAATGGATCCGTCACAACGTACAGGGGTGGCCCATGGTTCGGAAGTAGGTTTAGTGGAACTTCCCCTTTTAGAGAAACGGCAATTCATTATCCACGGTTCAATTATAGCGCGAACGAAGCATTCTTTTCGTTCGAGTCTGCGAAAAATCTCACTGGAAGATATGCGCTTGACACAGAAGGGTACTTCGGGCAATCTTATTGGATAGATGATGGAAATGATTGGTACTCTTTGTATAAATTACCAGGAGACGATTGCGATAAGTACGGACACTGCGGAAATTTTGGTATTTGTACATATTCCGTCATACCTCTCTGCGATTGCATCCATGGGTTTCAACCGGAATCGCCAGATGATTGGAAAAAGAAGATCTGGTCAGGTGGGTGCGTTAGAAGGGACAATCAAACCTGCAAAAATGGAGAAGGGTTTAAAAGAATCAGCAGTGTGAAATTGCCAGATTCGTCAGGGAAGTTGGTGAATGTTGATACGAGCATTCATGACTGCGAAGCTGCGTGCTTGAGTAATTGCTCTTGCTTGGCTTATGCAATAATGGAGCTTTCCACAGGCGGCTATGGCTGCATCATGTGGTTTCAGAAATTGGTGGATATTAGAATCCTTCCTGATAATGGGCAGGATATATATGTGAGATTGGCGGCTTCAGAATTAGATTCGGCTAACAGGAAGCTTATAGTTGTGCTGAGTGTGTGTATTGCTTCTCTGATAAGCTTCCTGGCTGTAGTTGCTTGCCTTATCTATTGGCGTAGAAGGAGGGTTGAGGGTAATGAGGTTTTGTCTCAAGAGAACGAAGTTGAGATGCCACTCTATGATTTTACCATGATCATAACTGCCACAAATAATTTTTCTTTCTCAAATAAGATTGGCGAAGGTGGTTTCGGTCCCGTATACAAAGGCGTGCTTCCATGTGGACAAGAAATTGCAGTAAAAAGACTGGCAGAGGGTTCAAGCCAAGGGCAAAACGAGCTAAGAAACGAGGTTCTATTGATCTCCAAACTCCAACATCGAAATCTTGTCAAGCTGCTTGGTTTTTGCATTCATCAACAAGAAACGTTGCTGGTCTATGAATATATGCCAAACAAAAGTCTAGACTACTTTCTCTTCGATAACAAGAAGAGATCTTTACTCAATTGGAAAAAGAGACGGGATATCATAATCGGAATAGCTCGAGGTCTTCTTTATCTTCACAGAGATTCAAGGCTTATAATTATACATAGAGATCTCAAAGTGAGTAATATCTTACTTGATAACGAAATGAATCCAAAAATTTCAGACTTCGGTATGGCGCGTATGTTCGCTGAAGACCAAACTATGACACACACCAAAAGAGTCGTTGGGACCTATGGTTATATGTCTCCAGAGTATGTAATCGACGGATATTTTTCAATGAAATCTGATATCTTCAGTTTTGGAGTCATTCTTTTAGAAATAGTTAGTGGTAAGAAGAATAGAGGCTTCTTCCATCCCGACCATCAACTAAATCTTCTTGGACATGCATGGAAACTTTGGGATGAAGGAAATGCGTTGGAATTAATGGATGAAACATTGAAGGATCAATTCCAAAACTCTGAAGCCCTGCGATGCATTCAAGTTGGCCTTTTGTGTGTTCAAGAGAATCCTGAAGAAAGGCCAGCTATGTGGGGAATCAATGTTAGTACCCAGATATTAGTTTCATCTCAACAGAACTTTGTGTTGGGGATCTTCAATCCTCAAGGCTCCAAATTTCAGTACTTGGGAATATGGTACAAGAACATCCCACAGACTGTTGTGTGGGTAGCAAATAGAGACAACCCACTTGTAAATTCCTCTGCCAGATTAACATTCAAGGCAGGAAACCTCCTTCTTCAGAATGAAAGCGATGGAATTCTATGGTCTTCCACTTTTTCAGAATTTGTTAAAGAACCAGTCGCTCAACTACTAGATAACTGTAATTTGGTTATAAGAGAATCTGAGTCTGAAAATTATTTGTGGGAGAGTTTCAATTATCCCTTTGATACTCTGTTACCGGGCATGAAACTCGGTTGGGACTTGAAAACCGGTCTCAACCGGAAGTTGACGTCATGGAAAAGCTCAAATGATCGGTCGACCGGGGAAGTGGGGATTTCACTTATGGAATGGACCTTGGTGGACTTCCCCAGTTTGAAACTCGCAAAGGATCCGTCACAACGTACAGCATTCTTTTCGTTCGAGTCTGCGAAAAATCTCACTGTAAGATATGCACTGACCGCGGAAGGCTTCTTTGAACAACTTTATTGGGACAATGATAGAAACTATTGGCACAGTTTGCATAAATTACCAGGAGACGGCTGCGATGACTACGGACTCTGCGGAAATTTTGATTCTTCAGGGAATTTGGTGATTCTTAATACGAGCATTCCTGACTGCAAAGCCTCGTGCTTGAGTAATTGCTCTTGCTTGGCTTATGGAATAATGGAGCTCTCCACAGGCGGCTATGGCTGCATCACATGGTTTCAGAAATTGGTGGATATTAGAATCGTTCCTGATGATAATGGACAGGATATCTATGTGAGATTGGCAGCTTCAGAATTAGGTGTAATTGCAGACCCTTCAAAATTAGATTTGGTTAACAGGAAGCTTATAGTTGCGCCGTGTGTGTTTGTTGCTTCACTGATTAGCTTCTTCATTTTTGTTGCTTGCTTTATCTATTGGCGTAGGAGGGTTGAGGGTAAGTTCTCTTTTATATGA 3330 41.59 MGKLIWRYKVSIFLFFWTTIALFPRKSFAIDSIKAGESINGSTQMLVSAQQNFVLGMFNPKDTKFHYLGIWYKNIPQTVVWVANRDKPLVNSSARLTFNGGNLVLLNEGDGILWSSTTSKLVKEPIAQLLDNGNLVLREFGSENYLWESFNYPSDTLLPGMKLGWDSVTGLNRKLTAWKSSNDPSSGDFTYGMDLGGLPQFETRNGSVTTYRGGPWFGSRFSGTSPFRETAIHYPRFNYSANEAFFSFESAKNLTGRYALDTEGYFGQSYWIDDGNDWYSLYKLPGDDCDKYGHCGNFGICTYSVIPLCDCIHGFQPESPDDWKKKIWSGGCVRRDNQTCKNGEGFKRISSVKLPDSSGKLVNVDTSIHDCEAACLSNCSCLAYAIMELSTGGYGCIMWFQKLVDIRILPDNGQDIYVRLAASELDSANRKLIVVLSVCIASLISFLAVVACLIYWRRRRVEGNEVLSQENEVEMPLYDFTMIITATNNFSFSNKIGEGGFGPVYKGVLPCGQEIAVKRLAEGSSQGQNELRNEVLLISKLQHRNLVKLLGFCIHQQETLLVYEYMPNKSLDYFLFDNKKRSLLNWKKRRDIIIGIARGLLYLHRDSRLIIIHRDLKVSNILLDNEMNPKISDFGMARMFAEDQTMTHTKRVVGTYGYMSPEYVIDGYFSMKSDIFSFGVILLEIVSGKKNRGFFHPDHQLNLLGHAWKLWDEGNALELMDETLKDQFQNSEALRCIQVGLLCVQENPEERPAMWGINVSTQILVSSQQNFVLGIFNPQGSKFQYLGIWYKNIPQTVVWVANRDNPLVNSSARLTFKAGNLLLQNESDGILWSSTFSEFVKEPVAQLLDNCNLVIRESESENYLWESFNYPFDTLLPGMKLGWDLKTGLNRKLTSWKSSNDRSTGEVGISLMEWTLVDFPSLKLAKDPSQRTAFFSFESAKNLTVRYALTAEGFFEQLYWDNDRNYWHSLHKLPGDGCDDYGLCGNFDSSGNLVILNTSIPDCKASCLSNCSCLAYGIMELSTGGYGCITWFQKLVDIRIVPDDNGQDIYVRLAASELGVIADPSKLDLVNRKLIVAPCVFVASLISFFIFVACFIYWRRRVEGKFSFI 1109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6996654 7001941 - CrPI670011_03g008230.1 Cre03g0823 492853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0823 1109 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 456 565 - -
Cre03g0823 1109 CDD B_lectin 39 153 IPR001480 -
Cre03g0823 1109 Pfam S-locus glycoprotein domain 927 989 IPR000858 GO:0048544(InterPro)
Cre03g0823 1109 Pfam S-locus glycoprotein domain 211 318 IPR000858 GO:0048544(InterPro)
Cre03g0823 1109 ProSiteProfiles PAN/Apple domain profile. 340 421 IPR003609 -
Cre03g0823 1109 SUPERFAMILY alpha-D-mannose-specific plant lectins 797 901 IPR036426 -
Cre03g0823 1109 CDD STKc_IRAK 496 754 - -
Cre03g0823 1109 Gene3D Transferase(Phosphotransferase) domain 1 566 761 - -
Cre03g0823 1109 ProSiteProfiles Bulb-type lectin domain profile. 30 150 IPR001480 -
Cre03g0823 1109 Pfam PAN-like domain 998 1038 IPR003609 -
Cre03g0823 1109 Pfam PAN-like domain 340 406 IPR003609 -
Cre03g0823 1109 Gene3D Phosphorylase Kinase; domain 1 454 565 - -
Cre03g0823 1109 SMART serkin_6 490 763 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0823 1109 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 184 IPR036426 -
Cre03g0823 1109 Pfam D-mannose binding lectin 78 179 IPR001480 -
Cre03g0823 1109 Pfam D-mannose binding lectin 796 897 IPR001480 -
Cre03g0823 1109 SMART ntp_6 976 1053 IPR003609 -
Cre03g0823 1109 SMART ntp_6 341 420 IPR003609 -
Cre03g0823 1109 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 31 755 - -
Cre03g0823 1109 CDD PAN_AP_plant 337 421 - -
Cre03g0823 1109 Pfam Protein tyrosine and serine/threonine kinase 491 754 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0823 1109 SUPERFAMILY Protein kinase-like (PK-like) 471 757 IPR011009 -
Cre03g0823 1109 SMART blect_4 37 153 IPR001480 -
Cre03g0823 1109 SMART blect_4 757 871 IPR001480 -
Cre03g0823 1109 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Cre03g0823 1109 ProSiteProfiles PAN/Apple domain profile. 978 1054 IPR003609 -
Cre03g0823 1109 ProSiteProfiles Bulb-type lectin domain profile. 750 868 IPR001480 -
Cre03g0823 1109 CDD B_lectin 762 871 IPR001480 -
Cre03g0823 1109 CDD PAN_AP_plant 991 1054 - -
Cre03g0823 1109 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 566 770 - -
Cre03g0823 1109 Gene3D - 27 151 IPR036426 -
Cre03g0823 1109 Gene3D - 762 869 IPR036426 -
Cre03g0823 1109 ProSiteProfiles Protein kinase domain profile. 490 765 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0823 1109 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0823 Cre-Chr3:6996654 Cre03g0825 Cre-Chr3:7011824 2.30E-236 dispersed
Cre03g0822 Cre-Chr3:6988872 Cre03g0823 Cre-Chr3:6996654 0.00E+00 tandem
Cre03g0823 Cre-Chr3:6996654 Cre03g0824 Cre-Chr3:7004790 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63954 PF07714 PK_Tyr_Ser-Thr 1.10E-47 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0823 - - - 0.0