Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0825 ATGAAGCCCTTGATGCCGAAAATGACATCCAACTTCAGGCTCAATCATTTGTCTTTGCTCTGTTTCATACCTCTGTTTCTCCCACACTCAACCGCAGTCGACATCTTAAAATCAGGGCAATCCATTAACGACACCCAAGTAATTGTTTCAGCCGCCGAAAAGTTTGAATTGGGATTCTTCACTCAGCCCAAGTCCTCCAGTTTCAAGTATTTAGGAATCTGGTACAAGAGCCTTCCCGACTACGCCGTTTGGGTGGCAAACAGAGACAACCCAATTCTCAACTCCTCTGCCACTCTAAAATTCAATACAGATGGAAACTTGATTCTCGTCAATCAAACAGGTGAAGTTTTTTGGTCTTCAAATTCAACAAGTTCACTGAAAAATCCAATCGCTCAATTGCTAGATACAGGTAATTTCATTCTGAGAGATTCAAATTCACGATCTGACAATCATGTCTGGCAGAGTTTTGATTACCCCTTTGATACTCTGTTACCGGAAATGAAACTGGGTTGGGACTCCAAAACAGGGCTTAACCGGAAGTTAACATCAAGAAAGAATGAAAACGATCCGTCCTCTGGAGAATTCAGTTATGAAGTCAACACAGATGGGCTTGCTGAACTTGTGGTTCGTAAAGCAAACAAGACGATGTTTAGGGGAGGACCATGGTTTGGCGATGGTTTTACCCGACGTCGATCCACCGGAGGGATTTTCATATATAATTCTTCATATGAGGTATCATTTTCATATAATGCTCCAGACAATAACCCATCAAGAGTTGTGTTGGATGCAAGTGGGTCTGTTGAACACTCTATCTGGAGCGAAGAGGAGAAAGGATGGCGCAAAACATACACGTTTGAAGGATCTGGCTGCAACGACTACGATTTATGTGGAAATTTTGGTCTTTGTAGCTCTGTCTTAGTAGCAAGCTGTGGCTGTTTAGATGGGTTTAAACAGAAATCAACCCAAAATTTTTCAGATGGGTGTGTGAGAAAGGATGAAAAAATTTGTAGAGAAGGAGAAGGATTTAGAAAGATAAGTGATGTGAAATGGCCAGATTCCAGTGGGAAGTCAGTGAAATTGAAAATGGGTATTCAAAATTGCGAAACAGAGTGCTTGAATGATTGTCTTTGCTTGGCTTATGGCAAACTGGAAATTCCTAATATTGGGTCTGCCTGTGTCACCTGGTTTAACAAATTGATTGATATTAGATTTGTTCGTGATGTTGGAACTGGAGATGATCTCTTTGTGAGAGTGGCTGCTTCAGAATTAGAATGGAGTGAGAGGAGGAAGGGTATAATAGTTCCGGTGGTTGTGCCAATCGTGTCAGTGATAATCTTCTTGGCTTTAATCACGCTTTTTATCGTTAGGAATGTAAGAAGAAGAGCTAAAGATAATGGAGTTGCAATCACTGAGGATCTAATTCATGAGAATGAACTTGAGATGCCAATTGGGTTAATTGAAGCTGCGACCAACAATTTCTCAATTTCTAATAAGATAGGAGAAGGGGGTTTTGGACCTGTTTATAAGGGCAGACTCCCATGTGGACAAGAAATTGCGGTAAAGAAGCTAGCCGAAAGATCTCGTCAAGGATTGGAGGAGTTTAAAAATGAGGTCCTTTTCATTTCCCAACTTCAACATCGAAATCTTGTCAAACTTCTTGGTTTCTGCATTCACAAGGAAGAAACATTACTTATTTATGAATACATGCCTAACAAAAGTTTGGACTACTTCCTTTTTGACGACGGAAGACGTTGTTTACTCCATTGGCAAATGAGAATTGATATCATAATTGGCATTGCTCGAGGTCTTCTTTATCTTCATCGAGATTCAAGACTTCGAATTATTCATAGAGATCTCAAAGCTGCCAATATTTTATTAGATAGCGAAATGATGCCAAAAATCTCAGACTTTGGCATTGCACGTATGTTTGGTGAAGGTCAAATGGAAACAAAAACAAATAGAGTTATTGGGACCTACGGTTATATGTCTCCAGAATATGCCATGGAAGGTTTCTTTTCATTCAAATCTGATGTTTATAGCTTTGGAGTTATGGTTTTAGAAATAGTTAGCGGCAAGAGGAACCAAGGTTATTTTATTCACTCGGAACACGAAATGAATCTTCTTGGACACGCATGGAAACTTTGGAATGAAGGAAGGAGCTTGGAATTAGTAGATGGAGTGTTGGGTGATCAATTCCAAGAATATGAAGCACTAAAATACATAAATATTGGACTTTTATGTGTTCAAGCACATCCGAGAGAAAGACCAATTATGTCATCTGTGCTTTCAATGTTAGAAAATGATAACATGTCCTTCATTCATCCAAAAAGACCTGGATTCAATGGGGAAAGATTTTTATTTCCTGAAAAGCAGGGCAGTCCCCAATTAATTGTTTCAGCCGCCCAGAAGTTTGAATTGGGTTCTTCACTCAACCCAAAGCCTCGAATTTCAAGTACTTATGAATATGGTTTAAGGGCATTCCCGCCGTAG 2490 39.72 MKPLMPKMTSNFRLNHLSLLCFIPLFLPHSTAVDILKSGQSINDTQVIVSAAEKFELGFFTQPKSSSFKYLGIWYKSLPDYAVWVANRDNPILNSSATLKFNTDGNLILVNQTGEVFWSSNSTSSLKNPIAQLLDTGNFILRDSNSRSDNHVWQSFDYPFDTLLPEMKLGWDSKTGLNRKLTSRKNENDPSSGEFSYEVNTDGLAELVVRKANKTMFRGGPWFGDGFTRRRSTGGIFIYNSSYEVSFSYNAPDNNPSRVVLDASGSVEHSIWSEEEKGWRKTYTFEGSGCNDYDLCGNFGLCSSVLVASCGCLDGFKQKSTQNFSDGCVRKDEKICREGEGFRKISDVKWPDSSGKSVKLKMGIQNCETECLNDCLCLAYGKLEIPNIGSACVTWFNKLIDIRFVRDVGTGDDLFVRVAASELEWSERRKGIIVPVVVPIVSVIIFLALITLFIVRNVRRRAKDNGVAITEDLIHENELEMPIGLIEAATNNFSISNKIGEGGFGPVYKGRLPCGQEIAVKKLAERSRQGLEEFKNEVLFISQLQHRNLVKLLGFCIHKEETLLIYEYMPNKSLDYFLFDDGRRCLLHWQMRIDIIIGIARGLLYLHRDSRLRIIHRDLKAANILLDSEMMPKISDFGIARMFGEGQMETKTNRVIGTYGYMSPEYAMEGFFSFKSDVYSFGVMVLEIVSGKRNQGYFIHSEHEMNLLGHAWKLWNEGRSLELVDGVLGDQFQEYEALKYINIGLLCVQAHPRERPIMSSVLSMLENDNMSFIHPKRPGFNGERFLFPEKQGSPQLIVSAAQKFELGSSLNPKPRISSTYEYGLRAFPP 829
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7011824 7016169 - CrPI670011_03g008250.1 Cre03g0825 492855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0825 829 Pfam S-locus glycoprotein domain 217 319 IPR000858 GO:0048544(InterPro)
Cre03g0825 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0825 829 SMART serkin_6 493 773 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0825 829 ProSiteProfiles Bulb-type lectin domain profile. 33 154 IPR001480 -
Cre03g0825 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 29 156 - -
Cre03g0825 829 Gene3D Transferase(Phosphotransferase) domain 1 569 775 - -
Cre03g0825 829 Pfam D-mannose binding lectin 83 185 IPR001480 -
Cre03g0825 829 SMART blect_4 39 159 IPR001480 -
Cre03g0825 829 Gene3D Phosphorylase Kinase; domain 1 454 568 - -
Cre03g0825 829 Gene3D - 29 156 IPR036426 -
Cre03g0825 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 459 568 - -
Cre03g0825 829 ProSiteProfiles Protein kinase domain profile. 493 773 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0825 829 SUPERFAMILY Protein kinase-like (PK-like) 481 766 IPR011009 -
Cre03g0825 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 569 773 - -
Cre03g0825 829 PIRSF SRK 5 799 IPR024171 GO:0004674(InterPro)
Cre03g0825 829 Pfam PAN-like domain 336 402 IPR003609 -
Cre03g0825 829 CDD PAN_AP_plant 336 419 - -
Cre03g0825 829 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 26 779 - -
Cre03g0825 829 CDD STKc_IRAK 499 767 - -
Cre03g0825 829 ProSiteProfiles PAN/Apple domain profile. 336 419 IPR003609 -
Cre03g0825 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 190 IPR036426 -
Cre03g0825 829 Pfam Protein tyrosine and serine/threonine kinase 495 712 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0825 829 CDD B_lectin 40 159 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0823 Cre-Chr3:6996654 Cre03g0825 Cre-Chr3:7011824 2.30E-236 dispersed
Cre03g0825 Cre-Chr3:7011824 Cre05g1675 Cre-Chr5:27974467 3.30E-192 dispersed
Cre03g0824 Cre-Chr3:7004790 Cre03g0825 Cre-Chr3:7011824 6.10E-258 tandem
Cre03g0825 Cre-Chr3:7011824 Cre03g0826 Cre-Chr3:7019879 9.50E-163 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63956 PF07714 PK_Tyr_Ser-Thr 2.10E-46 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0825 - - - 0.0