Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0826 ATGAAACCCATCACCAACACCATTCCATTAATCCTTCTTCTCCTCTGCTTTGTTTTGAAATTTTCCAGCAGCATAGATACGATCACATCTACACAATTCCTCAAAGATCCCGAAGCTGTATTGTCCAATCGTGGCTTCTTCGAATTGGGTTTCTTCAGCCCTCCCAATTCCACCGATCGGTTCGTCGGAATTTGGGATAAACGAGTGCCTGTACGAACTGTTTTCTGGGTAGCTAACAGAGACAAGCCTCTCAACAACAAATCAGGGGTTTTCGCCGTATCCAACGACGGGAATCTCGTAGTATTAGATGAACACAATAAAATTCTTTGGAACTCCAATGTTTCTAACGCTGTAGTGAACTCCACCGCTCGTCTTCTTGATTCTGGAAACCTTGTTCTGCAGGACTCTGTTTCAGGGACCGTCATTTGGGAGAGTTTCAAAGACCCATCAGACAAATTCTTGCCAATGATGAAATTCATCACGAACTCAATCACAAACGAGAAAGTAGAAATCGTGTCGTGGAAAACCCCATCTGATCCATCTTCAGGAAATTTCTCCTTTGGAATCGACCCTCTGACGATCCCCGAAGTTATAATTTGGAAAAACAGCCGCCCGTATTGGAGATCCGGTCCATGGGACGGCCAAGTTTTCATCGGAATACCCGGTATGAACACTGACTATCTTTCTGGAGGTAATCTCGTAATCGAAAACAAAACTTACTCTCTCTCAATTGCCAATGCAAACGAAGCTCAGTTATTCTACTACTACTTGAACCCCAATGGTAGTTTGGAAGAGAATCGTTGGAATATTGAGGATCAAAAATACGAGATCGCTTGGTCAGCTCCTGAAACAGAGTGTGATGTTTATGGTGCTTGTGGAGCATTTGGGGTTTGTGATTCTCAAAGAACCCCAATATGCAGTTGTTTGAGGGGTTTTAAGCCAGAGAAGGAAGAAGAATGGAACAGAGGAAATTGGAGAAATGGGTGTGTGAGGAATTCACCATTGGAGTGTGAAAAGAAGAACATCAATGTTGAAATAGGAAAACATGAGGATGGGTTTTTGAAAATGGGAATGGTTAAAGTTCCAGATTCTGCAGCTTGGATTTTAGCTTCGGAAAATGAGTGCAGAGTCCAGTGTTTGTCAAACTGTTCTTGTTCTGCATATGCATATAGAACAGGGATTGGTTGTATGATATGGAGAAGAGATTTAATTGACATTCAACAGTTCAAGAATGATGGAGCAGACATTTATGTTCGTGTGGCATATTCAGAAATAGCTGATGAAAGTGGAATCACCAAAGACATGAAATTAGTCATCATAGCTTCTGTGGTAACAGGAAGCTTCATACTTATCTGCTGCATATATTGCTTATGGAAAAGGAAAAGGAAAAGGCAGATCAAGTTTTTGATGAACACTGGTGGTGATATGAAGCATGATAAAGTGAATGAAGTTAAGCTTCAGGAGCTGCCTCTTTTTGATTTTGAGAAGCTGGCAATTGCAACTAACCACTTTCATTTCAATAACAAGATTGGTCAGGGTGGGTTTGGGCCAGTGTACAAGGGAAAATTGGTAGATGGACAAGAAATAGCAGTAAAGAGACTTTCAAAGACCTCTGGACAAGGGCTTGAAGAGTTTACAAATGAAGTAATGGTGATTTCAAAACTACAACATAGAAATCTTGTGCAGCTTTTTGGTTGTTGTGTGGAGGGAGAAGAAAGAATGTTAGTTTATGAGTACATGCCAAATGGAAGCTTAGATTCAATTATTTTTGATTCAACTAAAGCCAAAGTGTTAGATTGGCGAAAAAGATTTAACGTCATTGAAGGAGTTGCTCGAGGACTTCTTTATCTCCATAGAGATTCGAGACTAAAAATCATTCATAGAGATCTAAAAGCTAGTAACATTTTACTAGATCAAGATTTAAATCCCAAAATTTCAGATTTTGGTACTGCTAGAATTGTTTACGGCAATGAAGCTCAAGCTAATACCACGAGAGTTATTGGTACTTATGGCTATATGTCTCCGGAATACGTGTTGAATGGCCAATTTTCAGAGAAGTCAGATGTGTTTAGCTTTGGAGTTTTGTTGCTTGAAATTATTAGTGGAAGAAAAAATACAAGCTTCTATGATAATGAACACGCCTTGAGCCTTCTAGGATTTGCATGGAAATTATGGATGGAGGACAATTCAGTTGCTTTGATTGATCAAACAATGTTTGAATTGTGTTCTCAAGCAGAGATTTTGAGGTGCATTCATGTAGGATTATTGTGTGTTCAAGAATTGGCAAAGGATAGACCAAATATAACGACAATTCTTCCGATGTTTCACAATGAGATCACAGATCTTCCAATACCAAAGCAACCTGGATTTAGTAGTAGGCATATTGAGATTCATACTGAGGCATTCCAACAAAATCATGTTGGAGCTTGCTCGCCAAACATGATCACGCTTACCTCATTTCATGATAGCCACCGTCCTTCAGCGTTTGGGTTCTGCGAGGCGGCAGAATCGCACCCCTCATTTGTCGATCGCCAGCCACTTCGCTCGTTGATCGCCGATTCAACCAGATCACTTCAAGATCCTATTGCTCAATTGCTGGATACAGGTAACTTGATGTTGAGCAATTCAAATTCAGGATCTGAAAATTATGTGTGA 2655 40.19 MKPITNTIPLILLLLCFVLKFSSSIDTITSTQFLKDPEAVLSNRGFFELGFFSPPNSTDRFVGIWDKRVPVRTVFWVANRDKPLNNKSGVFAVSNDGNLVVLDEHNKILWNSNVSNAVVNSTARLLDSGNLVLQDSVSGTVIWESFKDPSDKFLPMMKFITNSITNEKVEIVSWKTPSDPSSGNFSFGIDPLTIPEVIIWKNSRPYWRSGPWDGQVFIGIPGMNTDYLSGGNLVIENKTYSLSIANANEAQLFYYYLNPNGSLEENRWNIEDQKYEIAWSAPETECDVYGACGAFGVCDSQRTPICSCLRGFKPEKEEEWNRGNWRNGCVRNSPLECEKKNINVEIGKHEDGFLKMGMVKVPDSAAWILASENECRVQCLSNCSCSAYAYRTGIGCMIWRRDLIDIQQFKNDGADIYVRVAYSEIADESGITKDMKLVIIASVVTGSFILICCIYCLWKRKRKRQIKFLMNTGGDMKHDKVNEVKLQELPLFDFEKLAIATNHFHFNNKIGQGGFGPVYKGKLVDGQEIAVKRLSKTSGQGLEEFTNEVMVISKLQHRNLVQLFGCCVEGEERMLVYEYMPNGSLDSIIFDSTKAKVLDWRKRFNVIEGVARGLLYLHRDSRLKIIHRDLKASNILLDQDLNPKISDFGTARIVYGNEAQANTTRVIGTYGYMSPEYVLNGQFSEKSDVFSFGVLLLEIISGRKNTSFYDNEHALSLLGFAWKLWMEDNSVALIDQTMFELCSQAEILRCIHVGLLCVQELAKDRPNITTILPMFHNEITDLPIPKQPGFSSRHIEIHTEAFQQNHVGACSPNMITLTSFHDSHRPSAFGFCEAAESHPSFVDRQPLRSLIADSTRSLQDPIAQLLDTGNLMLSNSNSGSENYV 884
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7019879 7024205 - CrPI670011_03g008260.1 Cre03g0826 492856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0826 884 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0826 884 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 146 - -
Cre03g0826 884 CDD STKc_IRAK 510 775 - -
Cre03g0826 884 CDD B_lectin 31 149 IPR001480 -
Cre03g0826 884 FunFam receptor-like serine/threonine-protein kinase SD1-8 476 579 - -
Cre03g0826 884 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 213 IPR036426 -
Cre03g0826 884 Gene3D Transferase(Phosphotransferase) domain 1 580 782 - -
Cre03g0826 884 PIRSF SRK 834 883 IPR024171 GO:0004674(InterPro)
Cre03g0826 884 PIRSF SRK 2 823 IPR024171 GO:0004674(InterPro)
Cre03g0826 884 SMART blect_4 31 149 IPR001480 -
Cre03g0826 884 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 783 - -
Cre03g0826 884 Pfam S-locus glycoprotein domain 207 315 IPR000858 GO:0048544(InterPro)
Cre03g0826 884 CDD PAN_AP_plant 334 421 - -
Cre03g0826 884 SMART serkin_6 504 841 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0826 884 SMART ntp_6 348 420 IPR003609 -
Cre03g0826 884 Gene3D Phosphorylase Kinase; domain 1 477 579 - -
Cre03g0826 884 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Cre03g0826 884 ProSiteProfiles PAN/Apple domain profile. 337 421 IPR003609 -
Cre03g0826 884 SUPERFAMILY Protein kinase-like (PK-like) 489 799 IPR011009 -
Cre03g0826 884 Pfam D-mannose binding lectin 73 175 IPR001480 -
Cre03g0826 884 Pfam PAN-like domain 348 406 IPR003609 -
Cre03g0826 884 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 790 - -
Cre03g0826 884 ProSiteProfiles Protein kinase domain profile. 504 779 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0826 884 Pfam Protein tyrosine and serine/threonine kinase 505 738 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0826 884 Gene3D - 21 146 IPR036426 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1440 Cre-Chr2:25600982 Cre03g0826 Cre-Chr3:7019879 7.10E-152 dispersed
Cre03g0826 Cre-Chr3:7019879 Cre03g0828 Cre-Chr3:7036207 5.90E-288 dispersed
Cre03g0825 Cre-Chr3:7011824 Cre03g0826 Cre-Chr3:7019879 9.50E-163 tandem
Cre03g0826 Cre-Chr3:7019879 Cre03g0827 Cre-Chr3:7028933 5.40E-273 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63957 PF07714 PK_Tyr_Ser-Thr 2.60E-49 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0826 - - - 0.0