Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0827 ATGAAACCCCGAAAAAGGACTAACTTCTTTCATCTTCATCTTCATCTTTTGCTTTTCTGCTTCGGTTTAAGATTCTGCATCGCTAGAAATATCATCACATCAACGAACTTCATCACAGACCCTTCAACTCTGTTATCTGAAAGCAGTTTCTTCGAGTTGGGATTTTTTAGCCCTGTTAATACAACGAGCCGATATGTCGGAATATGGCTCAATCAAGGTTCTAAGCTCACTGTCGTATGGGTAGCTAACAGAGACAACCCTCTAAACCATACTTCTGGGGTTTTCACTATTTCCAAGGATGGAAATCTCGTTGTATTAGACGGAAAGAGTAACATTCTTTGGACTTCAAACATTCTAAATCCTACGATTAACTCGACTGCTCTGCTTTTAGATTCTGGTAATCTTATTTTACAAGACTCTGTTTCTGGGATGATTCTATGGGAGAGTTTCAAACATCCCTCTGATACATTCTTTCCAGCCATGAAAATTTTCACAAACACAAGAACTAAAGAGAAAATAGGGTTGACATCGTGGCAAAGCCCTTCTAATCCATCGAAAGGGCGTTTCTTCTTCGGCATCGATGTTCTGAATAACATTGCTGAAGCTTACATTTGGGAAGGCAGTGATCTGCGTTGGAGATCTGGTCCATGGAATGGCCAATCCTTCATTGGCATACCCCAGATGGATTCTGTTTATTATCTCCTTGGTTTCAGTCTCCTAATTGAAAACCAAACTTACTATCTCTCTGGTCCAAATAGAAATGAGCTGCTCAATTATGAGTTTTATCAGTTAACCTCACAGGGGAATTTTGAGCAATCGCATTGGGATGATACATTGAAGGACTGGAAACCTAGATGGTCAGCTCTAAAAACTCCGTGTGATTTCTATGGAACTTGTGGGGCGTTTGGAATCTGTGATCCAAAATCATTCCCTGTTTGCAGTTGTTTAAAAGGGTTTCAGCCAAAGAATGAGGAGGAATGGAATCAAGGAAATTGGGGAAGTGGGTGTTTGAGAAAGACATCATTGAAGTGTGAGAAAGTGAGAAACGTGAGTGTTGAACATGGCAAGGAAGATGGATTTTTGAAAGTGGGAACAGTTAATTTACCACATTTTGCAGAGTCGTTGAATTCCTCTGTTTCAGCAGAGGATTGCGGGGTTAAGTGCTCGGATGATTGTTCATGTTCTGCTTATGCTTATGAAAGTGGCATTGGCTGCATGCTATGGAGTGGGGATTTGATCGACGCTCGAAAGCTCGATTTTGGTGGAGCTACTTTTTACCTTAGATTGACATATTCGGAATTAGAGAATGCTACAAAAAGGTCGAAAGTGATCGTAATAGCTTCAGTGATAGCTGGAAGTGGATCACTAATCATCATCTTCATCATATTCGTCTCATGGAGAAGGATAATTGGCCAAAAAGCAAAGGAAGAGATCAGAAAAGGCAAGAAGACGATATTGTTAAAGGAGAGGGGGGAATTTTTGAACTTGGTGATGGATCACAGAATGGGAATCAATATGAATCAAGAATTACCAACTTATGACTTTGAGAAGCTGGCAATTGCAACAAACAATTTTCATTTAGATAACAAGCTTGGAAAGGGAGGATTTGGGCCAGTGTATAAGGGAAGGTTGGTGGATGGCCAAGAAATAGCTATAAAAAGACTCTCAAGAGCGTCTAATCAAGGGGTTGAAGAATTTATAAATGAAGTAACAGTGATTTCAAAACTCCAACATAGAAATCTTGTTCGGCTCTTTGGTTATTGTGTTGAGGGAGAAGAGAAGATGTTGATATACGAGTACATGCCAAACCTAAGTTTGGATGCATTTATCTTTGATCCCTCCAAACAAAAACTTTTAGATTGGAGAAAAAGGTTTGATATTATTATGGGAATTGCTCGAGGCCTCCTTTATCTTCACAAAGATTCTAGATTGAAGATCATCCATAGAGATCTAAAAGCTAGTAACATCCTCCTGGACGAAAATTTTAATTCCAAAATTTCGGATTTTGGTATGGCACGAATTTTTGACAACCAAGAAGATCAAGCCAATACTATAAGGGTCGTTGGAACCTATGGCTACATGTCTCCTGAATATGCCATGGGAGGTCGATTTTCAGAGAAATCAGATGTATTTAGCTTTGGAGTTTTGTTACTTGAAATAATTAGTGGGAAGAAAAATTCAAGTTTTTACCACGATGAGGATGTTCTAAGCTTATTAGAATTGGCATGGAACTTATGGAACGAAGAGAATCTAATTTCTTTGATTGATCCAACAACCTATGATTCGCGCCATCACAGAGAAATTTTGAGATGCATTCACGTAGGACTCTTATGCGTTCAAGAAGCCATGAAGGATAGGCCAAATATGGTAATCGTTCTTTCAATGCTCAATAGTGAAATTATAGATCTTTATCCTCCAAAACAACCTGGTTTTAGTGGCATGCAACTTGAGAGCAATACACATTTATCTCAACAAAGTGAGGATAAATATTCTGTAAATATGGTTACAATTACCAAATTAGGAGGACGGTAG 2532 38.86 MKPRKRTNFFHLHLHLLLFCFGLRFCIARNIITSTNFITDPSTLLSESSFFELGFFSPVNTTSRYVGIWLNQGSKLTVVWVANRDNPLNHTSGVFTISKDGNLVVLDGKSNILWTSNILNPTINSTALLLDSGNLILQDSVSGMILWESFKHPSDTFFPAMKIFTNTRTKEKIGLTSWQSPSNPSKGRFFFGIDVLNNIAEAYIWEGSDLRWRSGPWNGQSFIGIPQMDSVYYLLGFSLLIENQTYYLSGPNRNELLNYEFYQLTSQGNFEQSHWDDTLKDWKPRWSALKTPCDFYGTCGAFGICDPKSFPVCSCLKGFQPKNEEEWNQGNWGSGCLRKTSLKCEKVRNVSVEHGKEDGFLKVGTVNLPHFAESLNSSVSAEDCGVKCSDDCSCSAYAYESGIGCMLWSGDLIDARKLDFGGATFYLRLTYSELENATKRSKVIVIASVIAGSGSLIIIFIIFVSWRRIIGQKAKEEIRKGKKTILLKERGEFLNLVMDHRMGINMNQELPTYDFEKLAIATNNFHLDNKLGKGGFGPVYKGRLVDGQEIAIKRLSRASNQGVEEFINEVTVISKLQHRNLVRLFGYCVEGEEKMLIYEYMPNLSLDAFIFDPSKQKLLDWRKRFDIIMGIARGLLYLHKDSRLKIIHRDLKASNILLDENFNSKISDFGMARIFDNQEDQANTIRVVGTYGYMSPEYAMGGRFSEKSDVFSFGVLLLEIISGKKNSSFYHDEDVLSLLELAWNLWNEENLISLIDPTTYDSRHHREILRCIHVGLLCVQEAMKDRPNMVIVLSMLNSEIIDLYPPKQPGFSGMQLESNTHLSQQSEDKYSVNMVTITKLGGR 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7028933 7032057 + CrPI670011_03g008270.1 Cre03g0827 492857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0827 843 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 24 811 - -
Cre03g0827 843 Pfam D-mannose binding lectin 77 179 IPR001480 -
Cre03g0827 843 Gene3D Transferase(Phosphotransferase) domain 1 601 802 - -
Cre03g0827 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0827 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 150 - -
Cre03g0827 843 SUPERFAMILY Protein kinase-like (PK-like) 505 796 IPR011009 -
Cre03g0827 843 SMART ntp_6 355 429 IPR003609 -
Cre03g0827 843 Pfam PAN-like domain 356 414 IPR003609 -
Cre03g0827 843 SMART blect_4 35 153 IPR001480 -
Cre03g0827 843 Pfam S-locus glycoprotein domain 212 323 IPR000858 GO:0048544(InterPro)
Cre03g0827 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 494 600 - -
Cre03g0827 843 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Cre03g0827 843 CDD B_lectin 35 153 IPR001480 -
Cre03g0827 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 184 IPR036426 -
Cre03g0827 843 Gene3D - 26 151 IPR036426 -
Cre03g0827 843 Gene3D Phosphorylase Kinase; domain 1 499 600 - -
Cre03g0827 843 CDD STKc_IRAK 531 797 - -
Cre03g0827 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 601 804 - -
Cre03g0827 843 ProSiteProfiles Protein kinase domain profile. 525 776 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0827 843 SMART serkin_6 525 769 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0827 843 ProSiteProfiles PAN/Apple domain profile. 344 430 IPR003609 -
Cre03g0827 843 CDD PAN_AP_plant 355 429 - -
Cre03g0827 843 Pfam Protein tyrosine and serine/threonine kinase 526 740 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0827 843 PIRSF SRK 3 843 IPR024171 GO:0004674(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0827 Cre-Chr3:7028933 Cre03g0829 Cre-Chr3:7042765 7.20E-275 dispersed
Cre11g1973 Cre-Chr11:31491262 Cre03g0827 Cre-Chr3:7028933 7.20E-71 dispersed
Cre03g0826 Cre-Chr3:7019879 Cre03g0827 Cre-Chr3:7028933 5.40E-273 tandem
Cre03g0827 Cre-Chr3:7028933 Cre03g0828 Cre-Chr3:7036207 1.40E-283 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63958 PF07714 PK_Tyr_Ser-Thr 4.30E-49 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0827 - - - 0.0