Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0828 ATGACGAAACCCCAAATGAATTGGCGCTTTTCCGGTCGTCTTCTTCTTCTTCTTCTTCTTTCACTAATTACATGCTTCTCTTCAAAGTTTTGCTATGGTGATACAATTACATCAGCTGATTTCATCAAATACCCTGCAACCAAAATTTCCAATGCCACTTCCTTCGAATTGGGCTGGTTCTCACCTATTAATTCCACAGCCCAATACGTCGGAATTTGGTACCATCAAGTTTCCCTAAAAACTATAGTATGGGTTGCTAACAAAGACACCCCTCTCAACAATACTTCCGGAATTTTCACCATCTCCAACGATGGAAATCTTGTGATCTTAGACGAAAACAACACCATCATTTGGTCTTCAAATGTTACTTCTCCTACAGTCAACACAACCGCCCGAATTCTAGATTCAGGCAACCTTGTCTTGGAAGATCCTGCTTCCGGATTGGTTATTTGGGAGAGTTTCAAACACCCTTCCAATATATTCTTGCCTTCCATGGAGCTTGTCACAAACAAAAGAACTCAAGACAAGCTTGAAATTACTTCATGGAAAACCCCTTCCGATCCATCTACAGGTAACTTTTCTTTAGCGTTGGATGTTGTTAATATTCCTGAAGCTGTGATTTGGAATAATGGAGGTAACCCATATTGGAGATCTGGTCCATGGAACGGTCATACTTTTATTGGAATACCCGAAATGATCTCTGTTTATCTCATTGGGTTTAATCTTGCGATTGAAGACCAAATTTATTATTTCTCAATTACTTACAATAATGACAATCAATTACTTTATACCATGGTATTAAGCCCAGAAGGGAATTTGGAGCAACAGTATTGGAATTCTTCGAAGAAAAATTGGGAAGCGAGTTGGTCGGCTTTTAGAACAGAATGTGATTATTACGGTGTTTGTGGTGCGTTTGGGGTCTGTAATGCGAATGCATCCCCTGTTTGCAGCTGTTTAACAGGGTTTAAACCAAAGGATGAGAAGGAATGGAATCGAGGAAATTGGAGTAATGGGTGTGTGAGAAATACGGCATTGCAGTGTGAGAAGTCCAATAACGCCACTACCAGCGGTGAGGAAGATGGATTTTTGGAAGTGGAATTGGTTAAAGTTCCATTTTTGGCAGAGTGGTCTAATTTCTCTACTTCAGCGGATGATTGCAAACAAGAATGCTTTGAGAATTGCTTGTGTAGTGCTTATGCATATGAAAATGGTATTGGTTGTATGCTATGGAAAAGGGACTTAATTGATGTACAGAAATTTGAAAGCCTTGGATCCAATCTTCATCTTCGACTGGCTCATGCAGACTTGCAAACAATTAATGATGTAAAAAGCAAGAGTACAGGAATTATTATAGCCATAGTGCTACCAGCAACACTTATGATCTTCATCATTGCCATATACTTCTGGTGGAGATGGAAGGCTAGCAAAAATGAGCATAGCAAAAAAGGGGGAAGACTGAAGTTGAGAAGCGATGACATGATTGGGGACCAAAGTAAATTTGAAGAACTACCTCTTTATGATTTTGAGAAGCTGGCAATTGCAACAAACAGTTTTGATTTAAGTCAAAAACTTGGACAAGGTGGCTTTGGTCCCGTATATAAGGGAAGGTTGCTAGATGGACAAGAAATAGCAATAAAAAGGCTTTCAAGAGCTTCTAAACAAGGGTATGAAGAATTTATAAATGAAGTGATTGTGATTTCTAAACTACAGCATAGAAATCTTGTTCAGCTTCTTGGTTGTTGCATTGAAGGAGAAGAGAAGATGCTAATATATGAGTATATGCCCAACCTAAGTCTGGATGCATTCATTTTTGACTCTACCAAACAAAAACTCTTGGATTGGAGAAAAAGATTTAACATCGTTGATGGAATTGCTCGAGGTCTCCTTTACCTCCATAGAGATTCAAGATTGAGAATTATTCATAGGGATTTGAAGGCAAGTAATATTTTATTAGACAAAGATATGAACCCTAAAATTTCAGACTTTGGTATGGCAAGAATTTTTGGCAATAATGAAGTGGAAGCTAATACTATAAGGGTTGTTGGAACTTATGGATATATGTCGCCTGAGTATGCAATGCAAGGTCAATTTTCAGAGAAATCAGATGTTTTTAGTTTTGGAGTTTTATTACTTGAAATTATAAGTGGAAAAAGGAACACAGGATTCAATCGCCATGAACATGCTTTAAGCTTATTGGAATTTGCATGGAAGTTGTGGATAGAAGACAATCTTATTGCTTTGATCGATCCCACAATGCATGAGTTGTGTTATCAATCAGAAATTTTGCGGTGCATCCAAATAGGACTCTTATGTGTTGAAGAATCTATAAATGATAGACCAAATGTTCTTGCCATTATTTCAATGCTGAACAGTGAAATTGTAGATCTTCCTATTCCAAAGCAGCCTAGCTTTATTGGCAGACCAACTCAAAGTAATCATTTTAATGAAGCAATGGTGGTTTTCCCACTTGGTCTTCTTCTTTCAATTAAATGCTTATGTCCAACGTTTTACTCAGACGAAAAAGAGATTTAG 2532 37.76 MTKPQMNWRFSGRLLLLLLLSLITCFSSKFCYGDTITSADFIKYPATKISNATSFELGWFSPINSTAQYVGIWYHQVSLKTIVWVANKDTPLNNTSGIFTISNDGNLVILDENNTIIWSSNVTSPTVNTTARILDSGNLVLEDPASGLVIWESFKHPSNIFLPSMELVTNKRTQDKLEITSWKTPSDPSTGNFSLALDVVNIPEAVIWNNGGNPYWRSGPWNGHTFIGIPEMISVYLIGFNLAIEDQIYYFSITYNNDNQLLYTMVLSPEGNLEQQYWNSSKKNWEASWSAFRTECDYYGVCGAFGVCNANASPVCSCLTGFKPKDEKEWNRGNWSNGCVRNTALQCEKSNNATTSGEEDGFLEVELVKVPFLAEWSNFSTSADDCKQECFENCLCSAYAYENGIGCMLWKRDLIDVQKFESLGSNLHLRLAHADLQTINDVKSKSTGIIIAIVLPATLMIFIIAIYFWWRWKASKNEHSKKGGRLKLRSDDMIGDQSKFEELPLYDFEKLAIATNSFDLSQKLGQGGFGPVYKGRLLDGQEIAIKRLSRASKQGYEEFINEVIVISKLQHRNLVQLLGCCIEGEEKMLIYEYMPNLSLDAFIFDSTKQKLLDWRKRFNIVDGIARGLLYLHRDSRLRIIHRDLKASNILLDKDMNPKISDFGMARIFGNNEVEANTIRVVGTYGYMSPEYAMQGQFSEKSDVFSFGVLLLEIISGKRNTGFNRHEHALSLLEFAWKLWIEDNLIALIDPTMHELCYQSEILRCIQIGLLCVEESINDRPNVLAIISMLNSEIVDLPIPKQPSFIGRPTQSNHFNEAMVVFPLGLLLSIKCLCPTFYSDEKEI 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7036207 7039565 + CrPI670011_03g008280.1 Cre03g0828 492858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0828 843 PIRSF SRK 7 819 IPR024171 GO:0004674(InterPro)
Cre03g0828 843 SUPERFAMILY Protein kinase-like (PK-like) 499 789 IPR011009 -
Cre03g0828 843 ProSiteProfiles Protein kinase domain profile. 518 794 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0828 843 Pfam S-locus glycoprotein domain 216 325 IPR000858 GO:0048544(InterPro)
Cre03g0828 843 Pfam Protein tyrosine and serine/threonine kinase 520 736 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0828 843 SMART blect_4 39 157 IPR001480 -
Cre03g0828 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 30 154 - -
Cre03g0828 843 Pfam D-mannose binding lectin 81 183 IPR001480 -
Cre03g0828 843 ProSiteProfiles PAN/Apple domain profile. 347 432 IPR003609 -
Cre03g0828 843 Gene3D Phosphorylase Kinase; domain 1 494 593 - -
Cre03g0828 843 CDD PAN_AP_plant 343 432 - -
Cre03g0828 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 594 797 - -
Cre03g0828 843 CDD B_lectin 55 157 IPR001480 -
Cre03g0828 843 Gene3D - 28 155 IPR036426 -
Cre03g0828 843 SMART serkin_6 518 794 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0828 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0828 843 ProSiteProfiles Bulb-type lectin domain profile. 33 154 IPR001480 -
Cre03g0828 843 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 25 802 - -
Cre03g0828 843 SMART ntp_6 357 431 IPR003609 -
Cre03g0828 843 Pfam PAN-like domain 357 417 IPR003609 -
Cre03g0828 843 Gene3D Transferase(Phosphotransferase) domain 1 594 795 - -
Cre03g0828 843 FunFam receptor-like serine/threonine-protein kinase SD1-8 491 593 - -
Cre03g0828 843 CDD STKc_IRAK 524 790 - -
Cre03g0828 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 223 IPR036426 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0826 Cre-Chr3:7019879 Cre03g0828 Cre-Chr3:7036207 5.90E-288 dispersed
Cre03g0828 Cre-Chr3:7036207 Cre03g0830 Cre-Chr3:7052421 0.00E+00 dispersed
Cre03g0827 Cre-Chr3:7028933 Cre03g0828 Cre-Chr3:7036207 1.40E-283 tandem
Cre03g0828 Cre-Chr3:7036207 Cre03g0829 Cre-Chr3:7042765 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63959 PF07714 PK_Tyr_Ser-Thr 1.00E-47 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0828 - - - 0.0