Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0831 ATGAAACCTAAAAACAACTACGCCTCTTCATATCCTACTCCACTTCTTCTTCTTCTTTCATTTACTTTCTTCTCTCCAACATTTTGCTTTGGCAAAGATTCAATCACATCAGAAAATTTCATCAAAGACCCTGCTTCTGTTACTTCCAATGCCAGTTCCTTCCAGTTGGGCTTCTTCACACCTCCTAATTCCACCGCCCGATATGTCGGAATTTGGTACAACCAAATTTCCTTACAAACCATAGTCTGGGTGGCCAACAAAGACAATCCCCTCAAAGATTCTTCTGGGATTTTCACTATTTCTAAACAGGGACATCTCGTCGTCTTAGATGGAAACCACACCGTCCTCTGGTCTTCAAATGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTACAACCAACACAATCGCTCGAATTTTAGATTCAGGTAACCTTGTCTTGGAAGATACTGCTTCTGGGAACATCATATGGGAGAGTTTTCAACACCCTTCTAATAAATTCTTGACTTCCATGAAACTGATCACGAACACAAGAACAAAAGAGAAGATGCAGCTTACCCCATGGAGCACCCCAGTTAATCCATCCACTGGAAACTTTTCCTTAGCACTAGAAGTTCTGACTATTCCTGAAGCTGTGATTTGGTCTAATGGTGGAAACCTTTATTGGCGATCTGGGCCATGGAACGGTCAGTCTTTTATCGGAATACCCGAAATGAACGCTGTTTATCTTTCTGGGTTTAACCTTGTAATTCAAGATCAAGAATACACTTTATCTGTTCCTTATAATTACACTATTCAAGAATTCGCTTATTTGTTTTTAACTTCGAGAGGGAATTTGGTGCAAACGTATTGGAATCCTCAAGTGAGGAATTGGGATGTTATTTGGTTTGCTATAAAAACAGAGTGTGATTTCTATGGAACTTGTGGGGCGTTTGGGATTTGTAATCCAAAGGCATCTCCTATTTGCAGCTGTTTAAAAGGGTTTAAGCCAAAGAATGAAGAGGAATGGAATCAAGGAAATTGGAGTGGTGGGTGTGTGAGAAGGACGCCATTGCAATGCATGAATGTCAGTTCTGAAGAAGATGGATTTCTAACAGTTGAAATGGTTAAATTGCCATATTTTGTAGAGTGGTCCATTTTCGCTGCTACAGAAGATAATTGCAAACAAGAGTGCTTGAGCAATTGTTCGTGTAATGCTTATGCATTTGAAAATGGTATTCGGTGTATGCTATGGAGAAGGGATGACTTAATTGATATACAAAAATTTGAGACTGGTGGGGCTTCTCTTTACCTTCGGCTGCCATATGCAGAATTAGATCATAATAATAATGTAAAAGATAAGAAAGGGATTATTATAGCAATTGTGCTACCAGTGACCTTTATCATCATGATCATCATCATTTTGCTTGTAATTGCAACAAACAATTTTGATATAAATAACAAACTTGGGCAAGGTGGGTTTGGTCCTGTATATAAGGGGAAATTGTTAAATGGACAAGAAATAGCAGTAAAAAGGCTTTCAAGAGCCTCCAATCAAGGGTATGAAGAATTTATAAATGAAGTGAGAGTGATTTCTAAACTACAACATAGAAATCTTGTAAGGCTCTTTGGTTGTTGCATGGAAGGAGAAGAGAAAATGTTGATATATGAGTATATGCCCCGCCTAAGTTTGGATGCTTTAATCTTTGGCTCTTCCCAGCCAGAACTTTTGGACTGGAGGCAGAGATTTAACATTATTGATGGAATTGCTCGAGGTCTTCTTTATCTTCATAGAGACTCAAGATTGAAAATCATTCATAGAGATCTCAAAGCAAGTAATATTTTGTTAGACCAAGATTTGAACCCTAAAATTTCTGACTTTGGCATGGCAAGGATTTTTTGTGGCAATGAAGTCCAAGCGAACACTTTAAGAGTTGTCGGAACTTATGGGTATATGTCTCCTGAATATGCAATGCAAGGTCGATTTTCAGAGAAATCAGATGTATTTAGTTTTGGAGTTCTGTTGCTTGAAATTATCAGTGGGAGACGAAATACAGAGTTTTACTACCATGAACAAGCTATAAGCTTATTGGGATTTGTATGGAAGTTGTGGATGGAAGACAATCTTATTCCTACGATCGAACCAAGAATATATGAATTGTGCTATCAACTAGAGATTTTTAGATGCATTCAAGTGGGGCTCTTATGCGTTCAAGAATTTGCAAATGATAGGCCAAATGTTTCCACTATTATTTCAATGCTCAATAGTGAAATTGTAGATCTTCATTCTCCAAAGGAACCTGGGTTTGTTGGTAGACCACATGAAATGGTGAAGAAGATGGGTTTGTATAAAGTGGAAATGGTTAAAGTAGCGTATTTTGTAGAGTGGTCTACTTTATCTTTTACTTCAAGTGATTGCAAACAAGAGTGTTTGAACAATTGTTCTTGTAATGCTTATGCGTATGAAGATGGAATTCGGTGTATGCTTTGGAGAAGGGATGAGTTAATTGATATTCAAAAGTTTGAGAGTGGTGGAGCTTCTCTTTACCTTCCGCCGTTCTTGCTTGTGCCCGACATTCGGCTCGTGGAAGACAACGCCGTTCGTGCTCATGGTTGCTGCCATCTCAATAAACGTGGGTCTATATATTTTGGAGAACGCCAGAAATGTTAA 2646 38.32 MKPKNNYASSYPTPLLLLLSFTFFSPTFCFGKDSITSENFIKDPASVTSNASSFQLGFFTPPNSTARYVGIWYNQISLQTIVWVANKDNPLKDSSGIFTISKQGHLVVLDGNHTVLWSSNVSSSSSSSSSTTNTIARILDSGNLVLEDTASGNIIWESFQHPSNKFLTSMKLITNTRTKEKMQLTPWSTPVNPSTGNFSLALEVLTIPEAVIWSNGGNLYWRSGPWNGQSFIGIPEMNAVYLSGFNLVIQDQEYTLSVPYNYTIQEFAYLFLTSRGNLVQTYWNPQVRNWDVIWFAIKTECDFYGTCGAFGICNPKASPICSCLKGFKPKNEEEWNQGNWSGGCVRRTPLQCMNVSSEEDGFLTVEMVKLPYFVEWSIFAATEDNCKQECLSNCSCNAYAFENGIRCMLWRRDDLIDIQKFETGGASLYLRLPYAELDHNNNVKDKKGIIIAIVLPVTFIIMIIIILLVIATNNFDINNKLGQGGFGPVYKGKLLNGQEIAVKRLSRASNQGYEEFINEVRVISKLQHRNLVRLFGCCMEGEEKMLIYEYMPRLSLDALIFGSSQPELLDWRQRFNIIDGIARGLLYLHRDSRLKIIHRDLKASNILLDQDLNPKISDFGMARIFCGNEVQANTLRVVGTYGYMSPEYAMQGRFSEKSDVFSFGVLLLEIISGRRNTEFYYHEQAISLLGFVWKLWMEDNLIPTIEPRIYELCYQLEIFRCIQVGLLCVQEFANDRPNVSTIISMLNSEIVDLHSPKEPGFVGRPHEMVKKMGLYKVEMVKVAYFVEWSTLSFTSSDCKQECLNNCSCNAYAYEDGIRCMLWRRDELIDIQKFESGGASLYLPPFLLVPDIRLVEDNAVRAHGCCHLNKRGSIYFGERQKC 881
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7064430 7071991 + CrPI670011_03g008310.1 Cre03g0831 492861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0831 881 Pfam S-locus glycoprotein domain 221 331 IPR000858 GO:0048544(InterPro)
Cre03g0831 881 Pfam D-mannose binding lectin 80 187 IPR001480 -
Cre03g0831 881 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 28 159 - -
Cre03g0831 881 CDD PAN_AP_plant 772 842 - -
Cre03g0831 881 Pfam Protein tyrosine and serine/threonine kinase 477 683 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0831 881 CDD STKc_IRAK 481 747 - -
Cre03g0831 881 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 227 IPR036426 -
Cre03g0831 881 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0831 881 Gene3D Phosphorylase Kinase; domain 1 458 550 - -
Cre03g0831 881 PIRSF SRK 763 849 IPR024171 GO:0004674(InterPro)
Cre03g0831 881 PIRSF SRK 465 773 IPR024171 GO:0004674(InterPro)
Cre03g0831 881 PIRSF SRK 5 471 IPR024171 GO:0004674(InterPro)
Cre03g0831 881 Pfam PAN-like domain 352 417 IPR003609 -
Cre03g0831 881 Pfam PAN-like domain 773 829 IPR003609 -
Cre03g0831 881 ProSiteProfiles Protein kinase domain profile. 475 751 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0831 881 ProSiteProfiles Bulb-type lectin domain profile. 32 159 IPR001480 -
Cre03g0831 881 CDD PAN_AP_plant 348 433 - -
Cre03g0831 881 ProSiteProfiles PAN/Apple domain profile. 769 845 IPR003609 -
Cre03g0831 881 Gene3D Transferase(Phosphotransferase) domain 1 551 755 - -
Cre03g0831 881 SMART ntp_6 769 844 IPR003609 -
Cre03g0831 881 SMART ntp_6 357 432 IPR003609 -
Cre03g0831 881 SMART blect_4 38 162 IPR001480 -
Cre03g0831 881 CDD B_lectin 39 162 IPR001480 -
Cre03g0831 881 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 551 754 - -
Cre03g0831 881 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 458 550 - -
Cre03g0831 881 Gene3D - 30 160 IPR036426 -
Cre03g0831 881 ProSiteProfiles PAN/Apple domain profile. 352 433 IPR003609 -
Cre03g0831 881 SUPERFAMILY Protein kinase-like (PK-like) 457 746 IPR011009 -
Cre03g0831 881 SMART serkin_6 475 828 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0831 881 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 24 761 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0829 Cre-Chr3:7042765 Cre03g0831 Cre-Chr3:7064430 3.70E-305 dispersed
Cre03g0831 Cre-Chr3:7064430 Cre04g1858 Cre-Chr4:36262618 4.50E-179 dispersed
Cre03g0830 Cre-Chr3:7052421 Cre03g0831 Cre-Chr3:7064430 1.20E-306 tandem
Cre03g0831 Cre-Chr3:7064430 Cre03g0832 Cre-Chr3:7075439 1.10E-13 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63962 PF07714 PK_Tyr_Ser-Thr 4.80E-46 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0831 - - - 0.0