Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0882 AGAGGGGAAAGTGGGGCTTTGGCCAACCGAGTCGGTGAGAACACGCAAACAGCTACCAGACGACCTGGCGATGGATTTTTACTTACTGGTCGAATGGGTATTGATTTTCGTTCTGCAGGAGAAGTTTATAGAACTACGGCCCCAAGTATGAGTTGCATCTGCTTCGGTTCCTCTACTGTGGAGAAGAAACGAATCTCTACACGTGCTGATAAGGAATTGGACATTGACTTGCTTGAGAATGTAAAACAAATCTCCTTCAATGAATTAAGATCTGCTTCGGACGATTTCCATTCAAACAATAGAATTGGACGGGGAGGTTTTGGAACTGTTTACAAGGGCACATTAAGGAATGGAGTACAAGTTGCAATAAAGAAGCTCTCCATAGAGTCTAAGCAAGGTGCTCACGAATTTTTGACAGAGATCAAAACCATTTCAAATGTTAGGCATCGGAACCTTGTCGAGTTGATTGGATGCTGTTCTCAAAAAGCTAACCGGATCTTGGTATATGAATATCTGGAGAATAATAGTCTCGACCATGCTTTGTTAGATCCTAAGAAAACAAGCGTGAACCTAGATTGGGGGAAGAGGTCCTCTATTTGCATTGGTACTGCGAGGGGTCTTCAATTTCTTCACGAGGAAGCTGTTCCACGTATTGTGCATAGAGACATCAAGGCTAGTAATATACTCCTTGATGGGGACTTCAATCCGAAAATTGGTGACTTTGGATTAGCCAAACTTTTCCCAGATGATATCACTCACATTAGCACAAGAATTGCAGGAACAACCGGTTATTTGGCTCCAGAGTATGCATTGGGAGGTCAGCTAACTCCAAAGGCTGATGTATATAGCTTTGGAGTCCTCATCCTTGAAATAGTTAGTGGTAGACGTAGCAGTACAGTTTTTGGGAGAGAAATATCAATACTCTTGCTGGAAAGGGTGTGGGAGCTATATGAAGAAGGAAAACTCTTAGAAATAGTTGATCCTAGACTAGAAGATTATCCTCAGGAAGAAGTGCTTAGGTACATGAAAGTGGCTCTTTTTTGCACACAAGCGGCTGCAAATCGGCGGCCAGCAATGAGCCAAGTTGTTGACATGCTTACAAAGAATATCAAGCTTAACGAGAAGCTACTTACCGCCCCGGGGTTCTATGGAGGCATGGGGCTTAGTGACATTCCTTCAGTGAGCAAGAAGACCTCGAACACTTCCACTAGCAACGAGATGAGCTCCGCCGTCGTCTCCATAACTCAAATCACCCCCAGATGA 1263 43.86 RGESGALANRVGENTQTATRRPGDGFLLTGRMGIDFRSAGEVYRTTAPSMSCICFGSSTVEKKRISTRADKELDIDLLENVKQISFNELRSASDDFHSNNRIGRGGFGTVYKGTLRNGVQVAIKKLSIESKQGAHEFLTEIKTISNVRHRNLVELIGCCSQKANRILVYEYLENNSLDHALLDPKKTSVNLDWGKRSSICIGTARGLQFLHEEAVPRIVHRDIKASNILLDGDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYALGGQLTPKADVYSFGVLILEIVSGRRSSTVFGREISILLLERVWELYEEGKLLEIVDPRLEDYPQEEVLRYMKVALFCTQAAANRRPAMSQVVDMLTKNIKLNEKLLTAPGFYGGMGLSDIPSVSKKTSNTSTSNEMSSAVVSITQITPR 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7559766 7569112 - CrPI670011_03g008820.1 Cre03g0882 492912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0882 420 Gene3D Phosphorylase Kinase; domain 1 63 171 - -
Cre03g0882 420 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524(InterPro)
Cre03g0882 420 ProSiteProfiles Protein kinase domain profile. 96 372 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0882 420 MobiDBLite consensus disorder prediction 1 23 - -
Cre03g0882 420 Gene3D Transferase(Phosphotransferase) domain 1 172 378 - -
Cre03g0882 420 SMART serkin_6 96 382 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0882 420 Pfam Protein tyrosine and serine/threonine kinase 98 366 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0882 420 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 67 405 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cre03g0882 420 FunFam Putative LRR receptor-like serine/threonine-protein kinase 172 378 - -
Cre03g0882 420 SUPERFAMILY Protein kinase-like (PK-like) 78 366 IPR011009 -
Cre03g0882 420 FunFam cold-responsive protein kinase 1 67 171 - -
Cre03g0882 420 CDD STKc_IRAK 102 368 - -
Cre03g0882 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0882 Cre-Chr3:7559766 Cre10g2306 Cre-Chr10:37307713 1.40E-114 dispersed
Cre03g0882 Cre-Chr3:7559766 Cre07g1399 Cre-Chr7:28896595 2.90E-91 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63963 PF00069 Pkinase 1.00E-45 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0882 - - - 0.0