Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0903 ATGGATGAAGATGCTAATTCTTGGTTAAGAAGAACCAAGTTTTCTCACACAATATGTTATCGTTTAGAGTCCTTACGATTGGCTGCCTTTCCTGTGGTCACTCAGCCACCACTCAAATCAGTCGCACAATCAAGATCAACCCTTCCTAATAACCTAACCAAGCAGAGGTCTTTATCTCCTCCTCCACAAACTACACTCTCCGGCGCATTTAAGGATGCACGTACCGATCAAAAACGATTTTCAACTCCACAGCCTCAGAGGAAAGAACCTGTAAAAGAAAAGGGTAAAAGGCTACTTAGTAAAAAAGCTAAGGTGCAAAATTCCCTGAAGGAAGAGAAGTTAAAAGGACCTTTGAGGCATCTTATATCTTTTAAAGGCAATGATAAGTTCAAATTCAAGGAGTCTTCTTGGACTAAGTTTGGCGGAGGGAAGGTCACTGCTGTTGAAGCTGAAGACGAATCGTCTATTGACCTGTCTAAGTTGATGTTTGGACATAGATTTGCTTTTGGAGCTCATAGTCGGCTATACCATGGAATTTATGAAGATAAAGTTGTTGCTGCTAAGATGATCAATCTACCAGTCAATGACGAAAATGGCGATCTCGCAGCTCGCTTAATAAAGCAATTTGGTAGGGAAGTAACCCTTTTGTCTCGTCTCCATCATCGCAATGTTATAAAGTTAGTAGCAGCAGTGAAAAAACCACCCGTTTATTGCATCATCACTGAGTATCTACCTCAGGGTTCCTTGAGGGCATATCTTCACAAACTTGAAAAAAAATCTCTCCCATTGCAAAAACAAATTGCCATTGCCTTAGACATTGCTCGTGGGATGGAATACATTCACTCGCAAGGCGTCATTCATCGGGATCTCAAACCTGAGAACATTCTTATTGATCAAGACTTTTGTCTAAAGATTGCCGATTTCGGCATTGCTTGTGAGGAGGCACATTGTGATACACTGGCTGAGGACCCCGGAACTTTTCGTTGGATGGCCCCCGAGATGATCAAACGTAAACCTTACGGGAGAAAGGTCGATATCTACAGCTTCGGACTTCTCCTATGGGAATTGGTAGCTGGAAAAATCCCTTATGAGGATATGACTCCAATCCAAGCAGCTTTTGCAGTTGTAGATAAGAATATTAGACCGGTCATCCCGGGGGAGTGTCCTCCAGTGATGCAGATGTTAATCGAGCAATGTTGGTGCGAGAAACCGGAGAAGAGGCCGGAGTTTTGGCAGGTGGTGAAAGTGTTAGAGCAACTTGAGAGTTGTGTTGGGGAAGATGGTAGATTGATGACGAATGTAGAGGTAGAGTTAGAGGGGAAGCCAAGTTGGGAAGATCACAAGAAAGGTTTAAAGCATTGGATACAGAAGTTTGGTCCTCTTCATTCTCATACTTCTCTCACCTCCAAATCTAAATTCATATGA 1425 42.74 MDEDANSWLRRTKFSHTICYRLESLRLAAFPVVTQPPLKSVAQSRSTLPNNLTKQRSLSPPPQTTLSGAFKDARTDQKRFSTPQPQRKEPVKEKGKRLLSKKAKVQNSLKEEKLKGPLRHLISFKGNDKFKFKESSWTKFGGGKVTAVEAEDESSIDLSKLMFGHRFAFGAHSRLYHGIYEDKVVAAKMINLPVNDENGDLAARLIKQFGREVTLLSRLHHRNVIKLVAAVKKPPVYCIITEYLPQGSLRAYLHKLEKKSLPLQKQIAIALDIARGMEYIHSQGVIHRDLKPENILIDQDFCLKIADFGIACEEAHCDTLAEDPGTFRWMAPEMIKRKPYGRKVDIYSFGLLLWELVAGKIPYEDMTPIQAAFAVVDKNIRPVIPGECPPVMQMLIEQCWCEKPEKRPEFWQVVKVLEQLESCVGEDGRLMTNVEVELEGKPSWEDHKKGLKHWIQKFGPLHSHTSLTSKSKFI 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7784446 7786185 - CrPI670011_03g009030.1 Cre03g0903 492933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0903 474 FunFam serine/threonine-protein kinase HT1 246 437 - -
Cre03g0903 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0903 474 ProSiteProfiles Protein kinase domain profile. 161 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0903 474 MobiDBLite consensus disorder prediction 39 102 - -
Cre03g0903 474 PANTHER SERINE-THREONINE PROTEIN KINASE 59 420 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cre03g0903 474 PRINTS Tyrosine kinase catalytic domain signature 388 410 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0903 474 PRINTS Tyrosine kinase catalytic domain signature 241 254 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0903 474 PRINTS Tyrosine kinase catalytic domain signature 279 297 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0903 474 PRINTS Tyrosine kinase catalytic domain signature 325 335 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0903 474 PRINTS Tyrosine kinase catalytic domain signature 344 366 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0903 474 Gene3D Transferase(Phosphotransferase) domain 1 245 453 - -
Cre03g0903 474 MobiDBLite consensus disorder prediction 72 96 - -
Cre03g0903 474 MobiDBLite consensus disorder prediction 39 71 - -
Cre03g0903 474 SUPERFAMILY Protein kinase-like (PK-like) 153 417 IPR011009 -
Cre03g0903 474 Gene3D Phosphorylase Kinase; domain 1 150 244 - -
Cre03g0903 474 Pfam Protein tyrosine and serine/threonine kinase 166 417 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0903 474 SMART serkin_6 161 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0903 474 CDD STKc_MAP3K-like 168 417 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0903 Cre-Chr3:7784446 Cre04g1775 Cre-Chr4:35707722 3.40E-88 dispersed
Cre03g0903 Cre-Chr3:7784446 Cre04g1918 Cre-Chr4:36749287 1.20E-165 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63965 PF07714 PK_Tyr_Ser-Thr 2.40E-59 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0903 - - - 0.0