Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre03g0973 | ATGTCGGAGGCGCCACCGAGACGACTAAGAGGTCACAAAGGCACTGCCACGTGCTGCATCGCCTCGAATGACCGTCCTGGCCTCGTCGCTACTTCAGGCGAGGATGGTTGTGTTTGCTGGTTTGACATGAGATGCAAAGATGTCGTATCCATTATGGAAGTAGGAAAAGAACCCATTTCATCCATATGTTTCAAGCCAGGGAATGAAGATGTTATTTACATCTCGTCTGGGAAGGAAATTAAGTCATTTGATGTCCATCAGGCCACATCATCAAAACCGTTGGGGAGTTATAGTTACAACAAAGAGGAGATAAATCAGGTTTCTTGTAGCTCCAAAGCTTCTTTTCTGGCTGCCGCTGATGATAGTGGCGATGTTAAGATCATTGATATTCACAATAATTGCCTATATAAAACATTAAGATCTGGCCATACAAGTATCTGTAGCAGTGTTCAGTTCCTTCCTTGGAGACCCTGGGAAGTTATTACAGGAGGACTTGATTCAAAGCTCATTATGTGGGACTTTTCCAGAGGACGCCCCATCAAAGTACTTGATTTTGTTTTATCTGATCCTGCTGAGAAGACGTCTGCAAGACACGATATCCCTGCCAACAACCCTTCCAGCAACACGGGACAATGTTTCAATCCTGCATTTGTTCATGCAATAGCAGTTCCTGAAGTTAATATGCTGGACAAAACAGGCCAGATATGTGTCGTTGCAAGGGGGGATGGTATTGTTCATGTGATTGATATTGAATCTGAGAAATTGAAGATTTCCTCAAAAACTGGTAAAAGAACACAAACAAGATCTAAGGGAGTTACAGCGCCTTGTGATATGGATAACCAAACGCAAACTGGAAGAAAGAGGTTATATTTGGATTACACTGTTGGTGGACATTCTGCTGCTGTGTCCTGTGTGGCGTTTTCTCAATTTGGAGAGAAAGGGAAGTTCATAGTTTCTGGTGGGAATGATAAATGCATAAAGCTTTGGAATTGGTGTGGAGTTCCTGATGCTGGGGAAACTAGCAGCAGCAACAACGATATTCTTCATTTGAACATCAATCTGAGCAAAAAGGTGAACTGGCTTTGTACTACTCCATCTGAATCAGAAAACCTTATCGTTTGTGATACCAGCAAAGTAGTGAAGATCCTTAAGAATAACAATTTTGAGTCTAAGAGTAGGCATTTGCTGAGAATCACCACCAAATATTACCTTCCTGACAAGGTGCAGCACCCTCCTATCTCCAGGAATCAGCATTTCACCTTCATCCAAGCAAAAATTGATCGAAAGAAGAAGATTCAAACTCCAGTGAGAAGCGCACTTCAATTTGAAGATTCACAGACTCTGGAGTTGCTTGCATTTGTGTGGGGTTGCTTTTCCAGTTTCTCCTGTAGCGGTTTGGTTGGTGCACAATCGTCTGTTAGTAGTTCAAATCAAAGACGTGCTCGCCCTAACCAAATCTTTGCTTACACTTCCCGCAAAATTCAAATCTGTTTCTACACACACTTTGCTTCTCATCTCTTCTTCCTCTCCTCTGCAGATGGAATCAGGTGTCCGAAGAAAGGGCAAGTGAGAAACAGGATGATGGTTTCTGATGTTCCCATTTGCCACACTTGTGGTGAACCAGTCGGGGTTGATGGCAATGGAGAGGTTTTCGTTGCTTGCCATGAGTGCCATTTTCCTATTTGTAGAGTCTGCGTTCAGTATGATATTAAGGAAGGTCGAAATGTTTGCTTGCGGTGTGGCTCTCCATTTGACGAGAACTTGCTGATGGATGCTGATACGAAGAGATCAGGAGATCGAAACACAATGGAATCTCATCTCAGTCATTCTCAGGACGTTGGAGTTCATGCTAGACATGTCAGTAGTGTGTCGACAGTGGATAGTGAATTGAATGATGAATCCGGGAACCCAATTTGGAAGAACAGAGTAGAGAGTTGGAAGGATAAGAAGAATAAAAAGAAACGGCCTACTGTGAAGACTGAACAGGAAGCTCAAATACCTCCCCAACAACAAATGGAAGAGAAACAGATTTCAGAGGAGACTGCAGTTACACACTCATTTTCTTCAGTTTATCCAATTCCGTCCAGCAGATTAACACCATACAGAATTGTGATAATCATGCGATTGATCATTCTAGCCCTTTTCTTTCAGTATCGAATAACAAATCCTGTTGATAGTGCTTTTGGTCTATGGCTCACTTCTATCATATGCGAAATCTGGTTTGCCTTCTCCTGGGTGTTGGATCAGTTCCCTAAATGGTCTCCCGTCTGCAGAGACACATTCATTGACAGATTATCAGCCAGGTTTGAAAGAGAGGGAGAACCTTCCCAACTTGCTGCTGTGGATTTTTTTGTGAGTACTGTTGATCCATTGAAAGAACCTCCACTAATAACTGCCAATACCGTGCTTTCAATCCTTGCTGTGGACTATCCTGTCGATAAAGTTTCCTGCTATGTGTCTGACGATGGTGCAGCTATGCTTACATTTGAATCTCTAGTTGAAACAGCTGACTTTGCAAGAATGTGGGTTCCATTCTGCAAGAAGTTCTCCATTGAACCCCGAGCTCCTGAGTTTTACTTCTCACAGAAAATAGACTATTTGAAAGATAAAGTGCAACCTTCTTTTGTCAAGGAACGTAGAGCAATGAAAAGAGCCTATGAAGAGTTTAAAGTACGAGTCAATGCTTTGGTAGCGAAGGCTCAGAAAACGCCAGATGAAGGCTGGTCCATGCAAGATGGAACAGCTTGGCCAGGAAATAATCCACGTGACCACCCTGGAATGATTCAGGTTTTTCTTGGAAATACTGGCGCCCATGACGTAGAGGGTAATGAACTTCCTCGACTGGTCTATGTCTCCAGAGAGAAGAGACCTGGTTACCAGCATCACAAAAAAGCTGGTGCTGAAAATGCTCTGGTGAGAGTATCAGCAGTCCTCACAAACGCCCCATTCATTCTCAACCTTGACTGTGATCATTATGTTAACAATAGCCAAGCTATACGTGAGGCAATGTGTTTCTTGATGGACCCACAAGTAGGCCGAGATGTATGCTATGTTCAATTTCCTCAGAGGTTTGATGGCATTGATCGAAGTGATCGATACGCCAATCGCAACACAGTTTTCTTTGATGTGAACATGAAAGGATTGGATGGCATCCAGGGACCGGTTTACGTGGGTACAGGTTGTGTTTTCAATAGACAGGCTCTTTATGGCTATGGACCTCCTACTCTGCCTAGCTTATCTAAGACGACATCCTCATCATCCTGCTCTTGGTGTGGCTGCTGCTCGTGCTGCTGTCCTTCCAAGAAGGTCTCAAAAGATCCGACTGAGATTCAGAGAGATGCAAAAAGAGAAGAGCTTGATGCTGCAATCTTTAATCTAAGGGAAATAGATAATTATGATGAGTACGAGAGGTCAATGCTAATTTCTCAATTGAGCTTTGAGAAAACTTTTGGCCTATCTTCTGTATTTATTGAGTCTACACTAATGGAAAATGGAGGAGTTGCAGAATCTGCAAATCCATCGACTTTGATTAAAGAAGCAATTCATGTCATTGGCTGTGGTTATGAAGAGAAGACTGCCTGGGGAAAAGAGATTGGTTGGATATACGGTTCAGTCACTGAGGATATCTTAACGGGTTTCAAGATGCATTGCCGAGGATGGAGGTCCATCTACTGCATGCCCGTGAGGCCAGCATTCAAAGGATCAGCACCGATTAACCTTTCTGATCGTCTGCACCAAGTTCTTCGATGGGCACTTGGATCTGTTGAGATTTTTCTCAGTAGACATTGTCCATTGTGGTATGGATTCGCAGGCGGTCGGCTCAAATGGCTCCAAAGAATGGCATACATAAACACCATTGTCTATCCGTTCACCTCCCTCCCTCTCATTGCCTACTGCTCATTGCCTGCAATCTGCCTGCTGACAGGAAAATTTATCATACCAACGCTCTCAAACCTAGCAAGTACCCTGTTTCTTGGTCTCTTCTTGTCCATCATTCTCACAAGTGTCCTCGAGCTGCGTTGGAGCGGTGTTAGCATCGAAGATATATGGCGTAACGAGCAATTTTGGGTCATAGGAGGCGTCTCAGCCCATCTCTTTGCTGTCTTCCAAGGGTTCCTAAAGATGTTGGCTGGCATCGACACCAACTTCACAGTTACTGCAAAGGCAGCTGATGACGCTGAGTTTGGAGAGCTTTACATGGTGAAATGGACAACACTTTTGATCCCTCCTACAACTCTCATTGTCGTTAACATGGTCGGTGTCGTTGCTGGATTTTCTGATGCATTAAATGGTGGATATGAAGCTTGGGGACCTCTTTTTGGCAAGGTCTTCTTTGCCTTCTGGGTGATTTTTCATCTCTATCCATTCCTCAAAGGTCTCATGGGTCGCCAAAACCGGACTCCAACCATTGTTGTTCTATGGTCAGTACTGTTGGCATCAGTTTTCTCACTTGTTTGGGTGAAGATCAACCCATTTGTGAACCAAGTTGACAGTACAACCGTTGCACAAAGCTGCATTGCCATAGATTGTTGA | 4533 | 43.75 | MSEAPPRRLRGHKGTATCCIASNDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGKEPISSICFKPGNEDVIYISSGKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSSKASFLAAADDSGDVKIIDIHNNCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPIKVLDFVLSDPAEKTSARHDIPANNPSSNTGQCFNPAFVHAIAVPEVNMLDKTGQICVVARGDGIVHVIDIESEKLKISSKTGKRTQTRSKGVTAPCDMDNQTQTGRKRLYLDYTVGGHSAAVSCVAFSQFGEKGKFIVSGGNDKCIKLWNWCGVPDAGETSSSNNDILHLNINLSKKVNWLCTTPSESENLIVCDTSKVVKILKNNNFESKSRHLLRITTKYYLPDKVQHPPISRNQHFTFIQAKIDRKKKIQTPVRSALQFEDSQTLELLAFVWGCFSSFSCSGLVGAQSSVSSSNQRRARPNQIFAYTSRKIQICFYTHFASHLFFLSSADGIRCPKKGQVRNRMMVSDVPICHTCGEPVGVDGNGEVFVACHECHFPICRVCVQYDIKEGRNVCLRCGSPFDENLLMDADTKRSGDRNTMESHLSHSQDVGVHARHVSSVSTVDSELNDESGNPIWKNRVESWKDKKNKKKRPTVKTEQEAQIPPQQQMEEKQISEETAVTHSFSSVYPIPSSRLTPYRIVIIMRLIILALFFQYRITNPVDSAFGLWLTSIICEIWFAFSWVLDQFPKWSPVCRDTFIDRLSARFEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFESLVETADFARMWVPFCKKFSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRAYEEFKVRVNALVAKAQKTPDEGWSMQDGTAWPGNNPRDHPGMIQVFLGNTGAHDVEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSQAIREAMCFLMDPQVGRDVCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPTLPSLSKTTSSSSCSWCGCCSCCCPSKKVSKDPTEIQRDAKREELDAAIFNLREIDNYDEYERSMLISQLSFEKTFGLSSVFIESTLMENGGVAESANPSTLIKEAIHVIGCGYEEKTAWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGFAGGRLKWLQRMAYINTIVYPFTSLPLIAYCSLPAICLLTGKFIIPTLSNLASTLFLGLFLSIILTSVLELRWSGVSIEDIWRNEQFWVIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAADDAEFGELYMVKWTTLLIPPTTLIVVNMVGVVAGFSDALNGGYEAWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINPFVNQVDSTTVAQSCIAIDC | 1510 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 8530318 | 8550315 | - | CrPI670011_03g009730.1 | Cre03g0973 | 493003 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre03g0973 | 1510 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 931 | 1073 | IPR029044 | - | |
Cre03g0973 | 1510 | Pfam | Zinc-binding RING-finger | 533 | 585 | IPR027934 | - | |
Cre03g0973 | 1510 | MobiDBLite | consensus disorder prediction | 645 | 673 | - | - | |
Cre03g0973 | 1510 | SMART | WD40_4 | 132 | 173 | IPR001680 | GO:0005515(InterPro) | |
Cre03g0973 | 1510 | SMART | WD40_4 | 45 | 84 | IPR001680 | GO:0005515(InterPro) | |
Cre03g0973 | 1510 | SMART | WD40_4 | 288 | 330 | IPR001680 | GO:0005515(InterPro) | |
Cre03g0973 | 1510 | SMART | WD40_4 | 2 | 42 | IPR001680 | GO:0005515(InterPro) | |
Cre03g0973 | 1510 | SMART | WD40_4 | 90 | 129 | IPR001680 | GO:0005515(InterPro) | |
Cre03g0973 | 1510 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 295 | 330 | - | - | |
Cre03g0973 | 1510 | Pfam | WD domain, G-beta repeat | 7 | 42 | IPR001680 | GO:0005515(InterPro) | |
Cre03g0973 | 1510 | Pfam | WD domain, G-beta repeat | 138 | 173 | IPR001680 | GO:0005515(InterPro) | |
Cre03g0973 | 1510 | Pfam | WD domain, G-beta repeat | 293 | 330 | IPR001680 | GO:0005515(InterPro) | |
Cre03g0973 | 1510 | SUPERFAMILY | RING/U-box | 523 | 601 | - | - | |
Cre03g0973 | 1510 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 140 | 182 | IPR001680 | GO:0005515(InterPro) | |
Cre03g0973 | 1510 | Gene3D | - | 228 | 425 | IPR015943 | GO:0005515(InterPro) | |
Cre03g0973 | 1510 | MobiDBLite | consensus disorder prediction | 595 | 614 | - | - | |
Cre03g0973 | 1510 | SUPERFAMILY | WD40 repeat-like | 5 | 384 | IPR036322 | GO:0005515(InterPro) | |
Cre03g0973 | 1510 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 795 | 1308 | IPR029044 | - | |
Cre03g0973 | 1510 | Gene3D | - | 2 | 195 | IPR015943 | GO:0005515(InterPro) | |
Cre03g0973 | 1510 | MobiDBLite | consensus disorder prediction | 262 | 278 | - | - | |
Cre03g0973 | 1510 | Pfam | Cellulose synthase | 781 | 1500 | IPR005150 | GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro) | |
Cre03g0973 | 1510 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 160 | 174 | IPR019775 | - | |
Cre03g0973 | 1510 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 519 | 608 | IPR013083 | - | |
Cre03g0973 | 1510 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 701 | 1477 | - | GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER) | |
Cre03g0973 | 1510 | FunFam | Cellulose synthase | 898 | 1072 | - | - | |
Cre03g0973 | 1510 | MobiDBLite | consensus disorder prediction | 259 | 278 | - | - | |
Cre03g0973 | 1510 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 295 | 330 | IPR001680 | GO:0005515(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre03g0973 | Cre-Chr3:8530318 | Cre06g0915 | Cre-Chr6:2565054 | 0.00E+00 | dispersed | |
Cre03g0973 | Cre-Chr3:8530318 | Cre02g1225 | Cre-Chr2:12234652 | 2.70E-107 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre03g0973 | K10999 | - | csv:101208988 | 1959.11 |