Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre03g0981 | ATGACTTCGGGTTCCAGAATGCCGACTTGGAAGGAGAGGGAAAACAACAAGCGTCGTGAGAGGCGCCGTCGTGCAATCGCCGCTAAGATCTTTCTCGGCTTGCGAATGTACGGCAACTACAAGCTCCCCAAGCATTGCGACAATAATGAGGTCCTCAAAGCCCTCTGTGATGAAGCTGGATGGACTGTCGAAGAAGACGGCACTACCTATCGGAAGGGATGCAAACCTGTGGAACGCGATATCATGGGTGGATCAGCTTCTGCGAGTCCATGTTCATCTTACCAGCCAAGCCCACGGGCATCTTATAACCCAAGTCCTGCATCTTCTTCCTTCCCAAGCCCCACATCTTCCCGTTATGCCATTAATGGCAATGACAATGCTACCGATCCCAATTCCCTCATCCCATGGCTGAAGAACCTTTCCTCAGGCTCATCATCAGCTTCCTCCAGGCTGCCTCACCATCTTTTTATTACTTGTGGCTCCATAAGTGCGCCTGTCACCCCTCCATCGAGCTCCCCAACTGCACGAACACCCAGAAAACCAAATGATTGGGACAATCATCCAGCAGTTGCTCCTGCTTGGGCTGCACAGCGCTTCTCATGTTTGCCTGCGTCGACCCCACCGAGCCCTGGGCGTCAGGTGTTGGCTGATCCAGCATGGCTTGATAGTATGCGGATTCCTCAAAGTGGACCATCATCTCCAACCTTCAGCCTTGTGGCAAGGAATCCATTCGGATTTAAGGAGGCAATGTCTGCCGGAGGGTCTCGTAATTGGACTCCTGCACAAAGCGGGACGTGCTCACCCACAGTTGCTGCAGGCACTGATCATACTTCAGATGTTACTATGATGGATGGAACTGCAGCGGAGTTTGCCTTCGGAAGTTGTTCCATTGGGATAGTGAAGCCTTGGGAAGGAGAGAGAATTCATGAGGAATGCATCTCTGATGATCTCGAACTCACACTTGGAAATTCAAGCACTAGGTGA | 984 | 51.73 | MTSGSRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVEEDGTTYRKGCKPVERDIMGGSASASPCSSYQPSPRASYNPSPASSSFPSPTSSRYAINGNDNATDPNSLIPWLKNLSSGSSSASSRLPHHLFITCGSISAPVTPPSSSPTARTPRKPNDWDNHPAVAPAWAAQRFSCLPASTPPSPGRQVLADPAWLDSMRIPQSGPSSPTFSLVARNPFGFKEAMSAGGSRNWTPAQSGTCSPTVAAGTDHTSDVTMMDGTAAEFAFGSCSIGIVKPWEGERIHEECISDDLELTLGNSSTR | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 8672778 | 8675395 | + | CrPI670011_03g009810.1 | Cre03g0981 | 493011 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre03g0981 | 327 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cre03g0981 | 327 | MobiDBLite | consensus disorder prediction | 84 | 124 | - | - | |
Cre03g0981 | 327 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 4 | 141 | IPR008540 | - | |
Cre03g0981 | 327 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 1 | 327 | IPR033264 | GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro) | |
Cre03g0981 | 327 | MobiDBLite | consensus disorder prediction | 86 | 124 | - | - | |
Cre03g0981 | 327 | MobiDBLite | consensus disorder prediction | 165 | 184 | - | - | |
Cre03g0981 | 327 | MobiDBLite | consensus disorder prediction | 255 | 270 | - | - | |
Cre03g0981 | 327 | MobiDBLite | consensus disorder prediction | 251 | 270 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre03g0981 | Cre-Chr3:8672778 | Cre07g1384 | Cre-Chr7:28736847 | 5.50E-122 | dispersed | |
Cre03g0981 | Cre-Chr3:8672778 | Cre04g1543 | Cre-Chr4:34062921 | 5.80E-55 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
53321 | PF05687 | BES1_N | 2.80E-66 | No_clan | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre03g0981 | - | - | - | 0.0 |