Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0981 ATGACTTCGGGTTCCAGAATGCCGACTTGGAAGGAGAGGGAAAACAACAAGCGTCGTGAGAGGCGCCGTCGTGCAATCGCCGCTAAGATCTTTCTCGGCTTGCGAATGTACGGCAACTACAAGCTCCCCAAGCATTGCGACAATAATGAGGTCCTCAAAGCCCTCTGTGATGAAGCTGGATGGACTGTCGAAGAAGACGGCACTACCTATCGGAAGGGATGCAAACCTGTGGAACGCGATATCATGGGTGGATCAGCTTCTGCGAGTCCATGTTCATCTTACCAGCCAAGCCCACGGGCATCTTATAACCCAAGTCCTGCATCTTCTTCCTTCCCAAGCCCCACATCTTCCCGTTATGCCATTAATGGCAATGACAATGCTACCGATCCCAATTCCCTCATCCCATGGCTGAAGAACCTTTCCTCAGGCTCATCATCAGCTTCCTCCAGGCTGCCTCACCATCTTTTTATTACTTGTGGCTCCATAAGTGCGCCTGTCACCCCTCCATCGAGCTCCCCAACTGCACGAACACCCAGAAAACCAAATGATTGGGACAATCATCCAGCAGTTGCTCCTGCTTGGGCTGCACAGCGCTTCTCATGTTTGCCTGCGTCGACCCCACCGAGCCCTGGGCGTCAGGTGTTGGCTGATCCAGCATGGCTTGATAGTATGCGGATTCCTCAAAGTGGACCATCATCTCCAACCTTCAGCCTTGTGGCAAGGAATCCATTCGGATTTAAGGAGGCAATGTCTGCCGGAGGGTCTCGTAATTGGACTCCTGCACAAAGCGGGACGTGCTCACCCACAGTTGCTGCAGGCACTGATCATACTTCAGATGTTACTATGATGGATGGAACTGCAGCGGAGTTTGCCTTCGGAAGTTGTTCCATTGGGATAGTGAAGCCTTGGGAAGGAGAGAGAATTCATGAGGAATGCATCTCTGATGATCTCGAACTCACACTTGGAAATTCAAGCACTAGGTGA 984 51.73 MTSGSRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVEEDGTTYRKGCKPVERDIMGGSASASPCSSYQPSPRASYNPSPASSSFPSPTSSRYAINGNDNATDPNSLIPWLKNLSSGSSSASSRLPHHLFITCGSISAPVTPPSSSPTARTPRKPNDWDNHPAVAPAWAAQRFSCLPASTPPSPGRQVLADPAWLDSMRIPQSGPSSPTFSLVARNPFGFKEAMSAGGSRNWTPAQSGTCSPTVAAGTDHTSDVTMMDGTAAEFAFGSCSIGIVKPWEGERIHEECISDDLELTLGNSSTR 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8672778 8675395 + CrPI670011_03g009810.1 Cre03g0981 493011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0981 327 MobiDBLite consensus disorder prediction 1 21 - -
Cre03g0981 327 MobiDBLite consensus disorder prediction 84 124 - -
Cre03g0981 327 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 141 IPR008540 -
Cre03g0981 327 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 327 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Cre03g0981 327 MobiDBLite consensus disorder prediction 86 124 - -
Cre03g0981 327 MobiDBLite consensus disorder prediction 165 184 - -
Cre03g0981 327 MobiDBLite consensus disorder prediction 255 270 - -
Cre03g0981 327 MobiDBLite consensus disorder prediction 251 270 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0981 Cre-Chr3:8672778 Cre07g1384 Cre-Chr7:28736847 5.50E-122 dispersed
Cre03g0981 Cre-Chr3:8672778 Cre04g1543 Cre-Chr4:34062921 5.80E-55 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
53321 PF05687 BES1_N 2.80E-66 No_clan Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0981 - - - 0.0