Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g0991 ATGGAAACGAATAACAGTAACAACGGGGTGAGGTTTTTGTTGGGGAAGCAATCGTCGATGGCGCCGGACCGGAAATCGGAGGAGGAGGCGGAGGCGGCGGAAGACGGGGAGGAGATCGATCCAGGGGTGAGATTGATGTATTTGGCGAATGAAGGCGATTTAGAAGGGATTAAGGAGCTTCTAGATTCTGGAATTGATGTCAATTTTCACGATGTTGATAATCGGACGGCGCTTCATGTTGCTGCTTGTCAAGGCTGCTCCAAGATCGTCGATTTATTGCTCCACCGTGGCGCTGAGATTGACCCTAAAGATCGCTGGGGTAGTACGCCTCTTGCAGATGCTATATTCTACAAAAATCATGAAGTTATCAAATTGCTGGAAAAAAGAGGCGCAAAACATCTGATGGCTCCCATGCTTGTCAAGCATGCTCGTGAAGTCCCAGAATATGAAATTGATCCTAAAGAATTTGACTTCACAAACAGTGTCAACTTGACCAAGGGTACCTTCCATCTTGCATCATGGCGCGGAATCCAAGTTGCAGTCAAAGAGCTTCCCGAGGATGTGATTTCAGAGGAGGATAAAGTGAACGCCTTTAGAGATGAGCTTGCATTGCTTCAGAAGATTCGGCATCCTAATGTCGTTCAATTTCTTGGTGCTGTCACTCAAAGTAGTCCCATGATGATTGTTACTGAATATTTGCCTAAGGGAGATCTTTGTCAACTGTTACAGAGAAAAGGAGCATTAAAACCAATTGTAGCTGTGAAATTTGCCCTTGATATTGCAAGGGGAATGAACTATTTGCACGAAAATAAACCTGCCCCGATCATCCACCGTGATCTCGAGCCATCAAATATATTGCGAGATGACACTGGGAACCTGAAAGTTGCAGACTTTGGAGTTAGCAAATTGCTCACAGTCAAGGAGGATAAACCTCTAATTTGTCAAGACACTGCTTGCCGATATGTCGCTCCAGAAGTTTTCAAAAACAATGGATACGATACCAAAGTAGATGTCTTCTCCTTTGCTTTAATTCTACAAGAGATGATCGAAGGGCAACCACCGTTTTCAAACAAAAAAGAAAATGCCATTCTTAAAGAGTATGCAGCCGGAGTACGCCCTCCTTTCAAAGCTCCAGCTAAATGCTACGCCCATGGAATTAAAGAGTTGATTGAAGATTGCTGGGATGAGAAGCCATCAAAGAGACCAACATTTAGGCAGATAATCACGAGGCTGGAAACAATTCATCACAGTCTTAGCCATAGAAGGCGTTGGAAGCTCCCAACAATGAGATGTTTTCAGGATCCAGAAGCTAAGATAAGAAGAGACAATCTCTCAAGCAGCCGGAGCCTTTCATCGCGATCTGCAAGCAGCATATGA 1377 44.44 METNNSNNGVRFLLGKQSSMAPDRKSEEEAEAAEDGEEIDPGVRLMYLANEGDLEGIKELLDSGIDVNFHDVDNRTALHVAACQGCSKIVDLLLHRGAEIDPKDRWGSTPLADAIFYKNHEVIKLLEKRGAKHLMAPMLVKHAREVPEYEIDPKEFDFTNSVNLTKGTFHLASWRGIQVAVKELPEDVISEEDKVNAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLCQLLQRKGALKPIVAVKFALDIARGMNYLHENKPAPIIHRDLEPSNILRDDTGNLKVADFGVSKLLTVKEDKPLICQDTACRYVAPEVFKNNGYDTKVDVFSFALILQEMIEGQPPFSNKKENAILKEYAAGVRPPFKAPAKCYAHGIKELIEDCWDEKPSKRPTFRQIITRLETIHHSLSHRRRWKLPTMRCFQDPEAKIRRDNLSSSRSLSSRSASSI 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8722559 8727507 + CrPI670011_03g009910.1 Cre03g0991 493021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g0991 458 FunFam Integrin-linked protein kinase family 23 149 - -
Cre03g0991 458 Gene3D Transferase(Phosphotransferase) domain 1 234 450 - -
Cre03g0991 458 Gene3D - 14 146 IPR036770 -
Cre03g0991 458 PIRSF ILK 1 433 - -
Cre03g0991 458 FunFam serine/threonine-protein kinase STY46-like 151 234 - -
Cre03g0991 458 ProSiteProfiles Ankyrin repeat profile. 73 105 IPR002110 GO:0005515(InterPro)
Cre03g0991 458 CDD STKc_MAP3K-like 167 411 - -
Cre03g0991 458 FunFam Os01g0748600 protein 144 431 - -
Cre03g0991 458 Gene3D Phosphorylase Kinase; domain 1 157 233 - -
Cre03g0991 458 ProSiteProfiles Ankyrin repeat region circular profile. 73 105 - -
Cre03g0991 458 SMART ANK_2a 106 135 IPR002110 GO:0005515(InterPro)
Cre03g0991 458 SMART ANK_2a 73 102 IPR002110 GO:0005515(InterPro)
Cre03g0991 458 SMART ANK_2a 40 69 IPR002110 GO:0005515(InterPro)
Cre03g0991 458 ProSiteProfiles Protein kinase domain profile. 123 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre03g0991 458 Pfam Ankyrin repeats (3 copies) 45 132 IPR002110 GO:0005515(InterPro)
Cre03g0991 458 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 74 412 IPR051681 GO:0004674(PANTHER)
Cre03g0991 458 SUPERFAMILY Ankyrin repeat 44 133 IPR036770 -
Cre03g0991 458 Pfam Protein tyrosine and serine/threonine kinase 170 411 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre03g0991 458 MobiDBLite consensus disorder prediction 1 37 - -
Cre03g0991 458 SUPERFAMILY Protein kinase-like (PK-like) 167 414 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0991 Cre-Chr3:8722559 Cre05g2570 Cre-Chr5:36921576 4.50E-82 dispersed
Cre09g1453 Cre-Chr9:27746350 Cre03g0991 Cre-Chr3:8722559 1.80E-86 transposed
Cre02g2139 Cre-Chr2:34964650 Cre03g0991 Cre-Chr3:8722559 9.20E-142 wgd
Cre03g0991 Cre-Chr3:8722559 Cre04g2018 Cre-Chr4:37481255 2.40E-147 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63973 PF07714 PK_Tyr_Ser-Thr 3.00E-55 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g0991 - - - 0.0