Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre03g1026 ATGGCGGCCTCAACAATGGCTCTGTCCTCGCCCTCACTCGCTGGAAAGGCGGTGAAACTTACGCCCTCCTCCCCTAAGCTTCTCGGCAATGGCAGAGTCAGTATGAGGAAATCCGCTGCCAAGCCTGTTTCTTCTGGAAGCCCATGGTACGGACCCGACCGTGTTAAGTATTTGGGGCCATTCTCCGGCGAGCCTCCGTCCTACCTCACCGGAGAATTCCCCGGTGACTACGGCTGGGATACTGCCGGACTTTCCGCAGACCCTGAGACCTTCGCCAAGAACCGTGAGCTTGAAGTCATCCACTCTAGGTGGGCCATGCTCGGAGCGTTGGGCTGCGTGTTCCCGGAGCTTCTTTCCCGCAACGGTGTGAAGTTTGGAGAAGCAGTGTGGTTCAAGGCGGGTTCACAAATCTTCAGCGAAGGTGGGCTGGACTACTTAGGGAACCCGAGCTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCTCAGGTGGTTCTCATGGGGGCCGTCGAGGGATACCGCATCGCCGGTGGCCCACTTGGGGAAGTGACCGACCCGATTTACCCGGGTGGGAGCTTTGACCCGTTGGGGCTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGGTGAAGAATGGAAGATTGGCGATGTTCTCTATGTTTGGATTCTTCGTTCAAGCCATCGTCACCGGAAAGGGCCCACTTGAGAATCTTGCCGACCACCTTGCTGACCCACTCAACAACAATGCTTGGGCCTATGCTACCAACTTTGTTCCTGGAAAATGA 798 56.39 MAASTMALSSPSLAGKAVKLTPSSPKLLGNGRVSMRKSAAKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPLNNNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9159931 9162176 - CrPI670011_03g010260.1 Cre03g1026 493056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre03g1026 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Cre03g1026 265 Pfam Chlorophyll A-B binding protein 65 232 IPR022796 -
Cre03g1026 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Cre03g1026 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 265 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Cre03g1026 265 FunFam Chlorophyll a-b binding protein, chloroplastic 56 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2152 Cre-Chr2:35092041 Cre03g1026 Cre-Chr3:9159931 4.90E-145 dispersed
Cre03g1026 Cre-Chr3:9159931 Cre04g2049 Cre-Chr4:37724473 1.80E-147 dispersed
Cre03g1026 Cre-Chr3:9159931 Cre03g1028 Cre-Chr3:9165761 2.00E-13 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre03g1026 K08912 - rcu:8289767 524.242